| Name: LOC100291082 | Sequence: fasta or formatted (164aa) | NCBI GI: 239752574 | |
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Description: PREDICTED: hypothetical protein XP_002348296
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.9 8 1 C cysteine 1.2 2 1 D aspartate 4.3 7 1 E glutamate 10.4 17 4 F phenylalanine 2.4 4 1 G glycine 3.0 5 1 H histidine 4.3 7 1 I isoleucine 4.9 8 1 K lysine 8.5 14 1 L leucine 9.1 15 2 M methionine 4.3 7 1 N asparagine 5.5 9 1 P proline 9.8 16 2 Q glutamine 4.9 8 1 R arginine 8.5 14 1 S serine 2.4 4 1 T threonine 5.5 9 2 V valine 3.7 6 1 W tryptophan 0.0 0 0 Y tyrosine 2.4 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002348296 LOC100291612 0.660 PREDICTED: similar to protein-L-isoaspartate (D-asp... LOC100290997 0.660 PREDICTED: hypothetical protein XP_002346467 LOC100291960 0.654 PREDICTED: similar to protein-L-isoaspartate (D-asp... PCMTD1 0.648 protein-L-isoaspartate (D-aspartate) O-methyltransf... LOC100292459 0.613 PREDICTED: similar to protein-L-isoaspartate (D-asp... LOC100290560 0.613 PREDICTED: hypothetical protein XP_002348294 LOC100287647 0.613 PREDICTED: hypothetical protein XP_002343514 PCMTD2 0.200 protein-L-isoaspartate (D-aspartate) O-methyltransf... PCMTD2 0.200 protein-L-isoaspartate (D-aspartate) O-methyltransf... CHIC1 0.048 cysteine-rich hydrophobic domain 1 RYR1 0.044 skeletal muscle ryanodine receptor isoform 2 RYR1 0.044 skeletal muscle ryanodine receptor isoform 1 MYST4 0.038 MYST histone acetyltransferase (monocytic leukemia)... SHROOM4 0.038 shroom family member 4 CCDC136 0.038 coiled-coil domain containing 136 PRKCSH 0.035 protein kinase C substrate 80K-H isoform 1 HP1BP3 0.035 HP1-BP74 YTHDC1 0.032 splicing factor YT521-B isoform 2 YTHDC1 0.032 splicing factor YT521-B isoform 1 RSF1 0.032 remodeling and spacing factor 1 SLC24A1 0.032 solute carrier family 24 (sodium/potassium/calcium ex... MDC1 0.029 mediator of DNA-damage checkpoint 1 NUCKS1 0.029 nuclear casein kinase and cyclin-dependent kinase su... USP16 0.025 ubiquitin specific protease 16 isoform a USP16 0.025 ubiquitin specific protease 16 isoform a LOC100294088 0.025 PREDICTED: hypothetical protein, partial SETD1A 0.025 SET domain containing 1A CMYA5 0.025 cardiomyopathy associated 5 MICAL3 0.025 microtubule associated monoxygenase, calponin and L...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
