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Name: CMYA5 Sequence: fasta or formatted (4069aa) NCBI GI: 62241003
Description:

cardiomyopathy associated 5

Referenced in:

Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1        250           3
 C cysteine            0.8         32           1
 D aspartate           4.7        191           2
 E glutamate          13.7        558           3
 F phenylalanine       2.8        115           2
 G glycine             4.0        161           2
 H histidine           2.3         92           2
 I isoleucine          4.3        173           2
 K lysine              8.0        324           4
 L leucine             7.6        308           4
 M methionine          1.4         57           2
 N asparagine          2.8        114           2
 P proline             7.3        298           2
 Q glutamine           4.1        166           2
 R arginine            2.8        113           3
 S serine             12.9        524           4
 T threonine           6.1        250           3
 V valine              6.2        253           2
 W tryptophan          0.4         17           1
 Y tyrosine            1.8         73           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cardiomyopathy associated 5 
FSD2                  0.039   fibronectin type III and SPRY domain containing 2 [H...
FSD1L                 0.009   fibronectin type III and SPRY domain containing 1-li...
FSD1L                 0.009   fibronectin type III and SPRY domain containing 1-l...
MUC12                 0.009   PREDICTED: mucin 12 
MUC17                 0.008   mucin 17 
MID1                  0.008   midline 1 
MID1                  0.008   midline 1 
MID1                  0.008   midline 1 
ANK2                  0.008   ankyrin 2 isoform 1 
MAP1B                 0.008   microtubule-associated protein 1B 
TTN                   0.007   titin isoform N2-A 
MID2                  0.007   midline 2 isoform 2 
MID2                  0.007   midline 2 isoform 1 
TRIM55                0.007   tripartite motif-containing 55 isoform 3 
TRIM55                0.007   tripartite motif-containing 55 isoform 1 
TRIM55                0.007   tripartite motif-containing 55 isoform 2 
GOLGB1                0.007   golgi autoantigen, golgin subfamily b, macrogolgin ...
TRIM36                0.007   tripartite motif-containing 36 isoform 1 
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
PCLO                  0.007   piccolo isoform 2 
PCLO                  0.007   piccolo isoform 1 
SPRYD4                0.007   SPRY domain containing 4 
TRIM54                0.006   ring finger protein 30 isoform 2 
TRIM63                0.006   muscle specific ring finger protein 1 
TRIM9                 0.006   tripartite motif protein 9 isoform 1 
ERMAP                 0.006   erythroblast membrane-associated protein precursor [...
ERMAP                 0.006   erythroblast membrane-associated protein precursor [...
DPCR1                 0.006   diffuse panbronchiolitis critical region 1 protein ...
AKAP9                 0.006   A-kinase anchor protein 9 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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