Guide to the Human Genome
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Name: MICAL3 Sequence: fasta or formatted (2002aa) NCBI GI: 209862789
Description:

microtubule associated monoxygenase, calponin and LIM domain containing 3 isoform 1

Referenced in:

LIM Domain Proteins

Other entries for this name:
alt prot [966aa] microtubule associated monoxygenase, calponin and LIM domain cont...
alt prot [1073aa] microtubule associated monoxygenase, calponin and LIM domain cont...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7        155           3
 C cysteine            1.0         20           1
 D aspartate           5.2        104           3
 E glutamate          11.5        230           9
 F phenylalanine       2.8         57           2
 G glycine             5.3        107           2
 H histidine           1.8         37           1
 I isoleucine          3.0         60           2
 K lysine              6.7        135           4
 L leucine             9.6        193           3
 M methionine          1.8         37           1
 N asparagine          2.5         51           2
 P proline             7.9        158           7
 Q glutamine           4.4         89           3
 R arginine            7.2        144           2
 S serine              9.3        187           4
 T threonine           4.4         89           2
 V valine              4.6         92           3
 W tryptophan          0.9         18           1
 Y tyrosine            1.9         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule associated monoxygenase, calponin and L... 
MICAL3                0.467   microtubule associated monoxygenase, calponin and L...
MICAL3                0.371   microtubule associated monoxygenase, calponin and L...
MICAL2                0.245   microtubule associated monoxygenase, calponin and LIM...
MICAL1                0.178   microtubule associated monoxygenase, calponin and L...
MICAL1                0.092   microtubule associated monoxygenase, calponin and L...
MICALCL               0.045   MICAL C-terminal like 
MICALL2               0.031   MICAL-like 2 isoform 1 
MICALL1               0.025   molecule interacting with Rab13 
EHBP1                 0.021   EH domain binding protein 1 isoform 2 
EHBP1                 0.021   EH domain binding protein 1 isoform 1 
EHBP1                 0.020   EH domain binding protein 1 isoform 3 
EHBP1                 0.020   EH domain binding protein 1 isoform 3 
SETD1A                0.020   SET domain containing 1A 
SPTB                  0.020   spectrin beta isoform a 
SPTB                  0.020   spectrin beta isoform b 
SETD1B                0.019   SET domain containing 1B 
EHBP1L1               0.019   tangerin 
SPTBN2                0.019   spectrin, beta, non-erythrocytic 2 
SPTBN1                0.018   spectrin, beta, non-erythrocytic 1 isoform 2 
SPTBN1                0.018   spectrin, beta, non-erythrocytic 1 isoform 1 
ACTN2                 0.018   actinin, alpha 2 
ACTN3                 0.018   actinin, alpha 3 
ACTN1                 0.018   actinin, alpha 1 isoform c 
ACTN1                 0.018   actinin, alpha 1 isoform a 
ACTN1                 0.018   actinin, alpha 1 isoform b 
SPTBN4                0.017   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
ACTN4                 0.017   actinin, alpha 4 
SRRM1                 0.017   serine/arginine repetitive matrix 1 
CYTSB                 0.017   spectrin domain with coiled-coils 1 NSP5a3b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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