Guide to the Human Genome
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Name: PCMTD2 Sequence: fasta or formatted (361aa) NCBI GI: 157388995
Description:

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 isoform 1

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [334aa] protein-L-isoaspartate (D-aspartate) O-methyltransferase domain c...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         19           1
 C cysteine            1.9          7           1
 D aspartate           5.8         21           2
 E glutamate           9.4         34           4
 F phenylalanine       4.2         15           2
 G glycine             6.1         22           2
 H histidine           1.9          7           1
 I isoleucine          5.5         20           2
 K lysine              7.2         26           2
 L leucine            10.5         38           2
 M methionine          1.7          6           1
 N asparagine          3.9         14           1
 P proline             5.8         21           2
 Q glutamine           3.0         11           1
 R arginine            6.4         23           4
 S serine              6.9         25           2
 T threonine           3.9         14           1
 V valine              6.1         22           1
 W tryptophan          0.6          2           1
 Y tyrosine            3.9         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein-L-isoaspartate (D-aspartate) O-methyltransf... 
PCMTD2                0.905   protein-L-isoaspartate (D-aspartate) O-methyltransf...
PCMTD1                0.657   protein-L-isoaspartate (D-aspartate) O-methyltransf...
LOC100291612          0.102   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100290997          0.102   PREDICTED: hypothetical protein XP_002346467 
LOC100291082          0.089   PREDICTED: hypothetical protein XP_002348296 
LOC100291960          0.084   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100292459          0.079   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100290560          0.079   PREDICTED: hypothetical protein XP_002348294 
LOC100287647          0.079   PREDICTED: hypothetical protein XP_002343514 
PCMT1                 0.043   protein-L-isoaspartate (D-aspartate) O-methyltransf...
CHIC1                 0.018   cysteine-rich hydrophobic domain 1 
NGEF                  0.013   neuronal guanine nucleotide exchange factor isoform...
NGEF                  0.013   neuronal guanine nucleotide exchange factor isoform...
KIAA1598              0.011   shootin1 isoform a 
KIAA1598              0.011   shootin1 isoform b 
TRMT61A               0.010   tRNA(m1A58)-methyltransferase subunit TRM61 
BAZ1A                 0.010   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.010   bromodomain adjacent to zinc finger domain, 1A isofo...
FBL                   0.009   fibrillarin 
NHSL2                 0.009   NHS-like 2 
WNT6                  0.009   wingless-type MMTV integration site family, member 6...
KIF21B                0.009   kinesin family member 21B 
GTF3C3                0.009   general transcription factor IIIC, polypeptide 3, 102...
TAOK2                 0.007   TAO kinase 2 isoform 1 
TAOK2                 0.007   TAO kinase 2 isoform 2 
CSRNP3                0.007   cysteine-serine-rich nuclear protein 3 
DNAJC21               0.007   DnaJ homology subfamily A member 5 isoform 2 
G3BP1                 0.007   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.007   Ras-GTPase-activating protein SH3-domain-binding pro...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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