Guide to the Human Genome
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Name: CRTC1 Sequence: fasta or formatted (634aa) NCBI GI: 148596965
Description:

mucoepidermoid carcinoma translocated 1 isoform 1

Referenced in:

CREB / ATF Family
Notch Pathway

Other entries for this name:
alt prot [650aa] mucoepidermoid carcinoma translocated 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         48           2
 C cysteine            0.3          2           1
 D aspartate           4.6         29           1
 E glutamate           3.8         24           2
 F phenylalanine       2.5         16           2
 G glycine             7.4         47           2
 H histidine           2.5         16           2
 I isoleucine          2.4         15           2
 K lysine              2.2         14           2
 L leucine             9.8         62           3
 M methionine          2.7         17           2
 N asparagine          3.5         22           2
 P proline            12.8         81           7
 Q glutamine           7.7         49           2
 R arginine            4.1         26           2
 S serine             13.2         84           5
 T threonine           7.4         47           2
 V valine              3.2         20           1
 W tryptophan          0.3          2           1
 Y tyrosine            2.1         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mucoepidermoid carcinoma translocated 1 isoform 1 [... 
CRTC1                 0.991   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC2                 0.257   CREB regulated transcription coactivator 2 
CRTC3                 0.206   transducer of regulated CREB protein 3 isoform b [H...
CRTC3                 0.206   transducer of regulated CREB protein 3 isoform a [H...
FLJ22184              0.045   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.037   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.034   PREDICTED: hypothetical protein LOC80164 
KDM6B                 0.033   lysine (K)-specific demethylase 6B 
MLL2                  0.033   myeloid/lymphoid or mixed-lineage leukemia 2 
FOXG1                 0.033   forkhead box G1 
HNRNPUL1              0.032   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.032   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
CPSF6                 0.032   cleavage and polyadenylation specific factor 6, 68 ...
BRD4                  0.032   bromodomain-containing protein 4 isoform long 
PRR12                 0.032   proline rich 12 
FMN1                  0.031   formin 1 
SETD1B                0.031   SET domain containing 1B 
FMN2                  0.030   formin 2 
INF2                  0.030   inverted formin 2 isoform 2 
INF2                  0.030   inverted formin 2 isoform 1 
SEC24D                0.030   Sec24-related protein D 
WIPF1                 0.029   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.029   WAS/WASL interacting protein family, member 1 
ZFHX4                 0.029   zinc finger homeodomain 4 
RAPH1                 0.029   Ras association and pleckstrin homology domains 1 is...
GLTSCR1               0.029   glioma tumor suppressor candidate region gene 1 [Ho...
ATXN2L                0.029   ataxin 2 related protein isoform B 
ATXN2L                0.029   ataxin 2 related protein isoform E 
ATXN2L                0.029   ataxin 2 related protein isoform C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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