BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo sapiens] (205 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo ... 432 e-122 gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo ... 432 e-122 gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo ... 432 e-122 gi|38490568 keratin associated protein 10-4 [Homo sapiens] 37 0.009 gi|239754902 PREDICTED: hypothetical protein [Homo sapiens] 33 0.13 gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo ... 33 0.13 gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 32 0.38 gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2... 31 0.64 gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1... 31 0.64 gi|225690551 keratin associated protein 4-9 [Homo sapiens] 31 0.64 gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] 31 0.84 gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens] 30 1.1 gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens] 30 1.1 gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens] 30 1.1 gi|154146260 keratin associated protein 4-3 [Homo sapiens] 30 1.4 gi|167621456 kinase suppressor of ras 2 [Homo sapiens] 30 1.4 gi|118572608 keratin associated protein 4-5 [Homo sapiens] 30 1.4 gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 30 1.9 gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ... 30 1.9 gi|8923271 coiled-coil domain containing 49 [Homo sapiens] 30 1.9 gi|4885135 cerberus 1 [Homo sapiens] 29 2.4 gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 29 2.4 gi|239755004 PREDICTED: hypothetical protein [Homo sapiens] 29 2.4 gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 29 2.4 gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo ... 29 2.4 gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 29 2.4 gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo ... 29 2.4 gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 29 2.4 gi|14210534 keratin associated protein 4.4 [Homo sapiens] 29 2.4 gi|13994129 keratin associated protein 4-12 [Homo sapiens] 29 2.4 >gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo sapiens] Length = 205 Score = 432 bits (1112), Expect = e-122 Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS Sbjct: 1 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60 Query: 61 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT Sbjct: 61 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120 Query: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS Sbjct: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180 Query: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205 HSRGSSTLPRRPPHQSFPRERRWGL Sbjct: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205 >gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo sapiens] Length = 205 Score = 432 bits (1112), Expect = e-122 Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS Sbjct: 1 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60 Query: 61 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT Sbjct: 61 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120 Query: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS Sbjct: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180 Query: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205 HSRGSSTLPRRPPHQSFPRERRWGL Sbjct: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205 >gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo sapiens] Length = 205 Score = 432 bits (1112), Expect = e-122 Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS Sbjct: 1 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60 Query: 61 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT Sbjct: 61 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120 Query: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS Sbjct: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180 Query: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205 HSRGSSTLPRRPPHQSFPRERRWGL Sbjct: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205 >gi|38490568 keratin associated protein 10-4 [Homo sapiens] Length = 401 Score = 37.4 bits (85), Expect = 0.009 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%) Query: 18 GDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS--PVASGMASANCRTFC 75 G VP A +L + +P S S +GC CC+ S PV SG +S+ C Sbjct: 285 GSVPICSGASSLCCQQSSCQPACCTSSQSQQGCCVPVCCKPVSCVPVCSGASSSCC---- 340 Query: 76 RNRTSSSTTPCKVASLPSPETTYLLICQ 103 + SS C S P ++ L+C+ Sbjct: 341 --QQSSCQPACCTTSCCRPSSSVSLLCR 366 >gi|239754902 PREDICTED: hypothetical protein [Homo sapiens] Length = 274 Score = 33.5 bits (75), Expect = 0.13 Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 16/103 (15%) Query: 3 GPLMAPRPVDLPGSWGDVP-------DLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSC 55 G +P P+ P SW +P GA L +PWA P +V GC + S Sbjct: 13 GICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWAC-PCGKVRTVMLTGCPAWSP 71 Query: 56 CRRASPV------ASGMASANCRTFCRNRTSSSTTPCKVASLP 92 + S + +SG A +FC T T C+ LP Sbjct: 72 LKTQSEIRGCTHHSSGAGPAGTGSFC--DTCRITRLCEQTQLP 112 >gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo sapiens] Length = 269 Score = 33.5 bits (75), Expect = 0.13 Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 16/103 (15%) Query: 3 GPLMAPRPVDLPGSWGDVP-------DLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSC 55 G +P P+ P SW +P GA L +PWA P +V GC + S Sbjct: 13 GICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWAC-PCGKVRTVMLTGCPAWSP 71 Query: 56 CRRASPV------ASGMASANCRTFCRNRTSSSTTPCKVASLP 92 + S + +SG A +FC T T C+ LP Sbjct: 72 LKTQSEIRGCTHHSSGAGPAGTGSFC--DTCRITRLCEQTQLP 112 >gi|221139764 PHD and ring finger domains 1 [Homo sapiens] Length = 1648 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Query: 160 CQGRLHGPLGAGEPEGRGENSHSRGSSTLPRRP 192 C RL G G G+P GRG + S SS +PR P Sbjct: 709 CISRLTGREGTGQP-GRGTRAESEASSRVPREP 740 >gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2 [Homo sapiens] Length = 195 Score = 31.2 bits (69), Expect = 0.64 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 6/62 (9%) Query: 33 PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92 P RP +S C SCCR V +C T C T C ++S P Sbjct: 132 PNCCRPSCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISSCP 185 Query: 93 SP 94 P Sbjct: 186 RP 187 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 50 CLSRSCCRRASPVASGMASANCRTFCRNRTSSSTT----PCKVASLPSPETTYLLICQ 103 C +CCR S S+ CR C T TT C V+S P+ + CQ Sbjct: 29 CCETTCCRTTCCRPSCCVSSCCRPHCCQTTCCRTTCYRPSCCVSSCCRPQCCQPVCCQ 86 >gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1 [Homo sapiens] Length = 210 Score = 31.2 bits (69), Expect = 0.64 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 6/62 (9%) Query: 33 PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92 P RP +S C SCCR V +C T C T C ++S P Sbjct: 147 PNCCRPSCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISSCP 200 Query: 93 SP 94 P Sbjct: 201 RP 202 >gi|225690551 keratin associated protein 4-9 [Homo sapiens] Length = 210 Score = 31.2 bits (69), Expect = 0.64 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 6/62 (9%) Query: 33 PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92 P RP +S C SCCR V +C T C T C ++S P Sbjct: 147 PNCCRPSCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISSCP 200 Query: 93 SP 94 P Sbjct: 201 RP 202 >gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] Length = 517 Score = 30.8 bits (68), Expect = 0.84 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 54 SCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103 SCC+ P + +++C+ C + + T C +S+ P T L+C+ Sbjct: 227 SCCQPVCPTPTCSVTSSCQAVCCDPSPCEPT-CSESSICQPATCVALVCE 275 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Query: 50 CLSRSCCRRASPVASGMASANCRTFCRNRTSS-----STTPCKV 88 C++ CR S S +C+ C+ TSS TTPCKV Sbjct: 438 CVTSYSCRPVYFRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKV 481 >gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens] Length = 632 Score = 30.4 bits (67), Expect = 1.1 Identities = 48/200 (24%), Positives = 76/200 (38%), Gaps = 29/200 (14%) Query: 1 MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60 ++G + RP+D W D P L A +A P + S + C R Sbjct: 259 VTGQAVVSRPLDAGWPWMDGPPLQAV-------FAPAPNHTLQRPSEQTCPQDLHTR--- 308 Query: 61 PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPE---TTYLLICQRNSNSFKKLFKVRD 117 G S+ R SS P SL P+ T L C ++ ++ L +D Sbjct: 309 ----GSLSSPQDPHTRGSLSSPKDPHTRGSLSCPQDPHTRGSLSCPQDPHTRGSLSSPQD 364 Query: 118 DGTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRG 177 T+ S +S + +G LS P + ++ P +G L P +P RG Sbjct: 365 PHTRGSLSSPQDPHTRG--SLSSPQDPHTRGSLSSPKDPH--TRGSLSSP---QDPHTRG 417 Query: 178 -----ENSHSRGSSTLPRRP 192 ++ H+RGS + P+ P Sbjct: 418 SLSSPKDPHTRGSLSSPQDP 437 >gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens] Length = 1243 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Query: 132 LQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENSHSRGSSTLPRR 191 L G + I VV A + I PG KI+ P+ AG PE NS + + +PRR Sbjct: 192 LSGAKKPIISVVLTAHEAI--PGATKIV-------PVEAGPPETGATNSETTSADLVPRR 242 >gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens] Length = 846 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Query: 132 LQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENSHSRGSSTLPRR 191 L G + I VV A + I PG KI+ P+ AG PE NS + + +PRR Sbjct: 180 LSGAKKPIISVVLTAHEAI--PGATKIV-------PVEAGPPETGATNSETTSADLVPRR 230 >gi|154146260 keratin associated protein 4-3 [Homo sapiens] Length = 195 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/51 (33%), Positives = 23/51 (45%) Query: 37 RPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCK 87 RP +S C SCCR A ++S + C + CR S TT C+ Sbjct: 131 RPSCCISSCYRPQCCQPSCCRPACCISSCCHPSCCVSSCRCPFSCPTTCCR 181 Score = 28.1 bits (61), Expect = 5.5 Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 11/128 (8%) Query: 37 RPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPET 96 RP +S C +CCR + ++S + C + C + TT C+ + S Sbjct: 51 RPSCCISSCCKPSCCRTTCCRPSCCISSCCRPSCCISSCCKPSCCRTTCCRPSCCISS-- 108 Query: 97 TYLLICQRNSNSFKKLFKVRDDGTKHSRTSRPFSYLQGRPELSIPVVCKAQDGIN---HP 153 C R S K T R S S RP+ P C+ I+ HP Sbjct: 109 -----CCRPSCCISSCCKPSCCQTTCCRPSCCISSCY-RPQCCQPSCCRPACCISSCCHP 162 Query: 154 GCVKIICQ 161 C C+ Sbjct: 163 SCCVSSCR 170 >gi|167621456 kinase suppressor of ras 2 [Homo sapiens] Length = 921 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 25 AALTLMLMPWAVR-PRRRVSHA-----SSRGCLSRSCCRRASPVASGMASANCRTFCRNR 78 +A TL + W+ + PRR + ++ S++ +S++C + G+ NC+ C N+ Sbjct: 360 SANTLSVPRWSPQIPRRDLGNSIKHRFSTKYWMSQTCTVCGKGMLFGLKCKNCKLKCHNK 419 Query: 79 TSSSTTPC 86 + PC Sbjct: 420 CTKEAPPC 427 >gi|118572608 keratin associated protein 4-5 [Homo sapiens] Length = 181 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 6/62 (9%) Query: 33 PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92 P RP +S C SCCR V +C T C T C +++ P Sbjct: 118 PTCCRPSCCISSCCHPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISTCP 171 Query: 93 SP 94 P Sbjct: 172 RP 173 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 50 CLSRSCCRRASPVASGMASANCRTFCRNRTSSSTT----PCKVASLPSPETTYLLICQ 103 C SCCR +S C+T C T TT C V+S P+ + CQ Sbjct: 60 CCISSCCRPYCCESSCCRPCCCQTTCCRTTCCRTTCCCPSCCVSSCCRPQCCQSVCCQ 117 >gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] Length = 517 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 54 SCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103 SCC+ P + +++C+ C + S C +S+ P T L+C+ Sbjct: 227 SCCQPVCPTPTCSVTSSCQAVCCD-PSPCEPSCSESSICQPATCVALVCE 275 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Query: 50 CLSRSCCRRASPVASGMASANCRTFCRNRTSS-----STTPCKV 88 C++ CR S S +C+ C+ TSS TTPCKV Sbjct: 438 CVTSYSCRPVYFRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKV 481 >gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo sapiens] Length = 517 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 54 SCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103 SCC+ P + +++C+ C + S C +S+ P T L+C+ Sbjct: 227 SCCQPVCPTPTCSVTSSCQAVCCD-PSPCEPSCSESSICQPATCVALVCE 275 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Query: 50 CLSRSCCRRASPVASGMASANCRTFCRNRTSS-----STTPCKV 88 C++ CR S S +C+ C+ TSS TTPCKV Sbjct: 438 CVTSYSCRPVYFRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKV 481 >gi|8923271 coiled-coil domain containing 49 [Homo sapiens] Length = 425 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/41 (39%), Positives = 19/41 (46%) Query: 164 LHGPLGAGEPEGRGENSHSRGSSTLPRRPPHQSFPRERRWG 204 L GPL A + G G +HSR S+ P H S R G Sbjct: 240 LQGPLTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAG 280 >gi|4885135 cerberus 1 [Homo sapiens] Length = 267 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 150 INHPGCVKIICQGRL-HGPLGAGEPEGRGENSHSRGSSTLPRR 191 I H GC K++ Q L G G+ G ++SH+ S LP + Sbjct: 171 ITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAK 213 >gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain containing 9 [Homo sapiens] Length = 4614 Score = 29.3 bits (64), Expect = 2.4 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 119 GTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGE 178 G+KHSR P RP + P + HP + L GP+ + PEG Sbjct: 2805 GSKHSR---PIPLPDQRPSAN-PGGIGEEAPCRHP-------REALDGPVFSRNPEGSRT 2853 Query: 179 NSHSRG--SSTLPRRPPHQSFP 198 S SRG S TLP R P S P Sbjct: 2854 LSPSRGKESRTLPCRQPCSSQP 2875 >gi|239755004 PREDICTED: hypothetical protein [Homo sapiens] Length = 558 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 165 HGPLGAGEPEGRGENSHSRGSSTL---PRRPP--HQSFPRERR 202 HGPL G G + G L PR PP H++ PR RR Sbjct: 407 HGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRR 449 >gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain containing 9 [Homo sapiens] Length = 4614 Score = 29.3 bits (64), Expect = 2.4 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 119 GTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGE 178 G+KHSR P RP + P + HP + L GP+ + PEG Sbjct: 2805 GSKHSR---PIPLPDQRPSAN-PGGIGEEAPCRHP-------REALDGPVFSRNPEGSRT 2853 Query: 179 NSHSRG--SSTLPRRPPHQSFP 198 S SRG S TLP R P S P Sbjct: 2854 LSPSRGKESRTLPCRQPCSSQP 2875 >gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo sapiens] Length = 443 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 165 HGPLGAGEPEGRGENSHSRGSSTL---PRRPP--HQSFPRERR 202 HGPL G G + G L PR PP H++ PR RR Sbjct: 371 HGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRR 413 >gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain containing 9 [Homo sapiens] Length = 4614 Score = 29.3 bits (64), Expect = 2.4 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 119 GTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGE 178 G+KHSR P RP + P + HP + L GP+ + PEG Sbjct: 2805 GSKHSR---PIPLPDQRPSAN-PGGIGEEAPCRHP-------REALDGPVFSRNPEGSRT 2853 Query: 179 NSHSRG--SSTLPRRPPHQSFP 198 S SRG S TLP R P S P Sbjct: 2854 LSPSRGKESRTLPCRQPCSSQP 2875 >gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo sapiens] Length = 522 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 165 HGPLGAGEPEGRGENSHSRGSSTL---PRRPP--HQSFPRERR 202 HGPL G G + G L PR PP H++ PR RR Sbjct: 371 HGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRR 413 >gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens] Length = 2365 Score = 29.3 bits (64), Expect = 2.4 Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 14/107 (13%) Query: 33 PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92 P A P R +SR SC +R +P AS +S N T RTS + AS P Sbjct: 388 PRASSPNRTTQRENSR----TSCAQRDNPKASRTSSPNRATRDNPRTSCAQRDNPRASSP 443 Query: 93 SPETTYLLICQRNSNSFKKLFKVRDDGTKHSRTSRPFSYLQGRPELS 139 S R + + D + SRTS P + P S Sbjct: 444 S----------RATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTS 480 Score = 27.3 bits (59), Expect = 9.3 Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 10/102 (9%) Query: 38 PRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETT 97 PR ++R + SC +R +P AS +S N T RTS + AS PS Sbjct: 438 PRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPS---- 493 Query: 98 YLLICQRNSNSFKKLFKVRDDGTKHSRTSRPFSYLQGRPELS 139 R + + D + SRTS P + P S Sbjct: 494 ------RATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTS 529 >gi|14210534 keratin associated protein 4.4 [Homo sapiens] Length = 166 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 50 CLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103 C +CCR + V+S C+T C RT+ C V+S P+ + CQ Sbjct: 30 CCRTTCCRPSCCVSSCCRPQCCQTTC-CRTTCCHPSCCVSSCCRPQCCQSVCCQ 82 >gi|13994129 keratin associated protein 4-12 [Homo sapiens] Length = 201 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 6/62 (9%) Query: 33 PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92 P RP +S + C SCCR + +C T C T C +++ P Sbjct: 138 PTCCRPSCCISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT------CVISTCP 191 Query: 93 SP 94 P Sbjct: 192 RP 193 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.134 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,916,897 Number of Sequences: 37866 Number of extensions: 515201 Number of successful extensions: 1958 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 53 Number of HSP's that attempted gapping in prelim test: 1808 Number of HSP's gapped (non-prelim): 196 length of query: 205 length of database: 18,247,518 effective HSP length: 97 effective length of query: 108 effective length of database: 14,574,516 effective search space: 1574047728 effective search space used: 1574047728 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.