Guide to the Human Genome
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Name: STARD9 Sequence: fasta or formatted (4614aa) NCBI GI: 239745175
Description:

PREDICTED: StAR-related lipid transfer (START) domain containing 9

Not currently referenced in the text

Other entries for this name:
alt mRNA {4614aa} PREDICTED: StAR-related lipid transfer (START) domain containing 9
alt prot {4614aa} PREDICTED: StAR-related lipid transfer (START) domain containing 9
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        320           3
 C cysteine            2.1         99           3
 D aspartate           4.8        223           2
 E glutamate           7.5        347           4
 F phenylalanine       2.4        111           2
 G glycine             6.0        277           3
 H histidine           3.0        138           2
 I isoleucine          2.6        120           2
 K lysine              4.4        205           3
 L leucine             9.1        420           2
 M methionine          1.4         65           2
 N asparagine          3.2        147           2
 P proline             7.6        350           3
 Q glutamine           6.5        298           5
 R arginine            6.2        288           3
 S serine             12.1        559           4
 T threonine           5.8        269           2
 V valine              5.5        255           3
 W tryptophan          1.1         50           1
 Y tyrosine            1.6         73           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: StAR-related lipid transfer (START) doma... 
STARD9                1.000   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.999   PREDICTED: StAR-related lipid transfer (START) doma...
KIF16B                0.051   kinesin-like motor protein C20orf23 
KIF13B                0.035   kinesin family member 13B 
KIF1B                 0.034   kinesin family member 1B isoform b 
KIF1A                 0.034   axonal transport of synaptic vesicles 
KIF1B                 0.033   kinesin family member 1B isoform alpha 
KIF13A                0.033   kinesin family member 13A isoform d 
KIF13A                0.033   kinesin family member 13A isoform c 
KIF13A                0.033   kinesin family member 13A isoform b 
KIF13A                0.033   kinesin family member 13A isoform a 
KIF14                 0.032   kinesin family member 14 
KIF1C                 0.030   kinesin family member 1C 
KIF17                 0.019   kinesin family member 17 isoform b 
KIF17                 0.019   kinesin family member 17 isoform a 
KIF3A                 0.019   kinesin family member 3A 
KIF3B                 0.018   kinesin family member 3B 
KIF4B                 0.018   kinesin family member 4B 
KIF4A                 0.018   kinesin family member 4 
KIF3C                 0.017   kinesin family member 3C 
KIF15                 0.017   kinesin family member 15 
KIF18B                0.017   kinesin family member 18B 
KIF11                 0.017   kinesin family member 11 
KIF18A                0.017   kinesin family member 18A 
KIF7                  0.016   kinesin family member 7 
LOC100131773          0.016   PREDICTED: similar to mCG116201 
KIF19                 0.016   kinesin family member 19 
KIF21A                0.016   kinesin family member 21A 
KIF5B                 0.016   kinesin family member 5B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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