Guide to the Human Genome
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Name: LOC651986 Sequence: fasta or formatted (632aa) NCBI GI: 169171269
Description:

PREDICTED: similar to forkhead box L2

Not currently referenced in the text

Other entries for this name:
alt prot {387aa} PREDICTED: similar to forkhead box L2
alt prot {528aa} PREDICTED: similar to forkhead box L2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         31           2
 C cysteine            2.1         13           1
 D aspartate           6.0         38           2
 E glutamate           2.7         17           2
 F phenylalanine       2.5         16           1
 G glycine             8.4         53           2
 H histidine           4.4         28           1
 I isoleucine          1.9         12           1
 K lysine              3.2         20           1
 L leucine             8.7         55           2
 M methionine          0.6          4           1
 N asparagine          2.1         13           1
 P proline            13.8         87           3
 Q glutamine           5.9         37           2
 R arginine            8.4         53           7
 S serine             13.9         88           2
 T threonine           5.1         32           1
 V valine              2.2         14           2
 W tryptophan          0.8          5           1
 Y tyrosine            2.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to forkhead box L2 
LOC651986             0.345   PREDICTED: similar to forkhead box L2 
LOC651986             0.345   PREDICTED: similar to forkhead box L2 
LOC100288524          0.285   PREDICTED: hypothetical protein XP_002342748 
FOXL1                 0.098   forkhead box L1 
FOXL2                 0.091   forkhead box L2 
FOXS1                 0.089   forkhead box S1 
FOXC1                 0.089   forkhead box C1 
FOXD4L3               0.087   forkhead box D4-like 3 
FOXD4L6               0.087   forkhead box D4-like 6 
FOXD4L2               0.086   forkhead box D4-like 2 
FOXD4L4               0.086   forkhead box D4-like 4 
FOXD4L5               0.086   forkhead box D4-like 5 
FOXD4L1               0.086   forkhead box D4-like 1 
FOXI2                 0.084   forkhead box I2 
FOXI3                 0.083   forkhead box I3 
FOXD2                 0.083   forkhead box D2 
FOXA2                 0.083   forkhead box A2 isoform 2 
FOXA2                 0.083   forkhead box A2 isoform 1 
FOXE3                 0.083   forkhead box E3 
FOXC2                 0.082   forkhead box C2 
FOXD4                 0.082   forkhead box D4 
FOXI1                 0.081   forkhead box I1 isoform a 
FOXD1                 0.081   forkhead box D1 
FOXE1                 0.079   forkhead box E1 
FOXD3                 0.079   forkhead box D3 
FAM47C                0.078   hypothetical protein LOC442444 
FOXA1                 0.077   forkhead box A1 
FOXB1                 0.073   forkhead box B1 
FOXG1                 0.073   forkhead box G1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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