Guide to the Human Genome
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Name: CER1 Sequence: fasta or formatted (267aa) NCBI GI: 4885135
Description:

cerberus 1

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         11           2
 C cysteine            3.4          9           1
 D aspartate           2.6          7           1
 E glutamate           8.2         22           2
 F phenylalanine       4.9         13           1
 G glycine             6.0         16           1
 H histidine           6.7         18           2
 I isoleucine          3.0          8           1
 K lysine              6.4         17           2
 L leucine             9.4         25           3
 M methionine          3.0          8           1
 N asparagine          2.2          6           2
 P proline             7.9         21           2
 Q glutamine           5.6         15           1
 R arginine            4.9         13           1
 S serine              8.2         22           2
 T threonine           5.6         15           2
 V valine              6.7         18           3
 W tryptophan          1.1          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cerberus 1 
GREM1                 0.086   gremlin-1 precursor 
DAND5                 0.082   dante precursor 
GREM2                 0.075   gremlin 2 precursor 
MUC2                  0.054   mucin 2 precursor 
LOC100294420          0.054   PREDICTED: similar to mucin 2 
NBL1                  0.047   neuroblastoma, suppression of tumorigenicity 1 2 prec...
NBL1                  0.047   neuroblastoma, suppression of tumorigenicity 1 1 [H...
MUC5B                 0.028   mucin 5, subtype B, tracheobronchial 
VWF                   0.019   von Willebrand factor preproprotein 
LOC100290812          0.019   PREDICTED: hypothetical protein XP_002347678 
LOC100288205          0.019   PREDICTED: hypothetical protein XP_002343496 
LOC100293983          0.009   PREDICTED: similar to mucin, partial 
LOC100291801          0.007   PREDICTED: hypothetical protein XP_002344789 
LOC100290035          0.007   PREDICTED: hypothetical protein XP_002347459 
LOC100289537          0.007   PREDICTED: hypothetical protein XP_002344118 
INSR                  0.007   insulin receptor isoform Short precursor 
INSR                  0.007   insulin receptor isoform Long precursor 
BOD1L                 0.007   biorientation of chromosomes in cell division 1-like...
FKBP15                0.007   FK506 binding protein 15, 133kDa 
MED13                 0.007   mediator complex subunit 13 
NEFH                  0.006   neurofilament, heavy polypeptide 200kDa 
CES7                  0.006   carboxylesterase 7 isoform 2 
LOC100287517          0.006   PREDICTED: hypothetical protein XP_002342795 
LOC100287517          0.006   PREDICTED: hypothetical protein 
TCF19                 0.006   transcription factor 19 
TCF19                 0.006   transcription factor 19 
ZNF280C               0.006   zinc finger protein 280C 
MCM3AP                0.006   minichromosome maintenance complex component 3 assoc...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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