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Search of human proteins with 10835085
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10835085 metallothionein 1H [Homo sapiens]
(61 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10835085 metallothionein 1H [Homo sapiens] 150 2e-37
gi|83367075 metallothionein 1E [Homo sapiens] 142 6e-35
gi|5174764 metallothionein 2A [Homo sapiens] 140 2e-34
gi|71274113 metallothionein 1A [Homo sapiens] 139 5e-34
gi|27414495 metallothionein 1B [Homo sapiens] 139 6e-34
gi|10835230 metallothionein 1G [Homo sapiens] 138 8e-34
gi|10835232 metallothionein 1X [Homo sapiens] 138 1e-33
gi|28866947 metallothionein 1F [Homo sapiens] 137 1e-33
gi|28866966 metallothionein 1M [Homo sapiens] 131 1e-31
gi|5174762 metallothionein 3 [Homo sapiens] 107 2e-24
gi|14269578 metallothionein 4 [Homo sapiens] 106 4e-24
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 52 1e-07
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 52 1e-07
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 50 4e-07
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 49 7e-07
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 49 9e-07
gi|60099478 keratin associated protein 5-6 [Homo sapiens] 49 1e-06
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 47 4e-06
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 46 7e-06
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 46 7e-06
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 45 1e-05
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 44 2e-05
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 44 3e-05
gi|154146260 keratin associated protein 4-3 [Homo sapiens] 43 6e-05
gi|46250735 keratin associated protein 10-2 [Homo sapiens] 42 8e-05
gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1... 42 1e-04
gi|225690551 keratin associated protein 4-9 [Homo sapiens] 42 1e-04
gi|118572608 keratin associated protein 4-5 [Homo sapiens] 42 1e-04
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 41 2e-04
gi|14210534 keratin associated protein 4.4 [Homo sapiens] 41 2e-04
>gi|10835085 metallothionein 1H [Homo sapiens]
Length = 61
Score = 150 bits (380), Expect = 2e-37
Identities = 61/61 (100%), Positives = 61/61 (100%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC
Sbjct: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|83367075 metallothionein 1E [Homo sapiens]
Length = 61
Score = 142 bits (358), Expect = 6e-35
Identities = 55/61 (90%), Positives = 58/61 (95%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC GGSC CAGSCKCK+CKCTSCKKSCCSCCP+GCAKCAQGC+CKGASEKCSCC
Sbjct: 1 MDPNCSCATGGSCTCAGSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCVCKGASEKCSCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|5174764 metallothionein 2A [Homo sapiens]
Length = 61
Score = 140 bits (353), Expect = 2e-34
Identities = 55/61 (90%), Positives = 58/61 (95%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC AG SC CAGSCKCK+CKCTSCKKSCCSCCP+GCAKCAQGCICKGAS+KCSCC
Sbjct: 1 MDPNCSCAAGDSCTCAGSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCICKGASDKCSCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|71274113 metallothionein 1A [Homo sapiens]
Length = 61
Score = 139 bits (350), Expect = 5e-34
Identities = 54/61 (88%), Positives = 56/61 (91%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC GGSC C GSCKCK+CKCTSCKKSCCSCCP+ CAKCAQGCICKGASEKCSCC
Sbjct: 1 MDPNCSCATGGSCTCTGSCKCKECKCTSCKKSCCSCCPMSCAKCAQGCICKGASEKCSCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|27414495 metallothionein 1B [Homo sapiens]
Length = 61
Score = 139 bits (349), Expect = 6e-34
Identities = 53/61 (86%), Positives = 57/61 (93%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC GGSCACAGSCKCK+CKCTSCKK CCSCCP+GCAKCAQGC+CKG+SEKC CC
Sbjct: 1 MDPNCSCTTGGSCACAGSCKCKECKCTSCKKCCCSCCPVGCAKCAQGCVCKGSSEKCRCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|10835230 metallothionein 1G [Homo sapiens]
Length = 61
Score = 138 bits (348), Expect = 8e-34
Identities = 55/61 (90%), Positives = 57/61 (93%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC AG SC CA SCKCK+CKCTSCKKSCCSCCP+GCAKCAQGCICKGASEKCSCC
Sbjct: 1 MDPNCSCAAGVSCTCASSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCICKGASEKCSCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|10835232 metallothionein 1X [Homo sapiens]
Length = 61
Score = 138 bits (347), Expect = 1e-33
Identities = 54/61 (88%), Positives = 57/61 (93%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC GSCACAGSCKCK+CKCTSCKKSCCSCCP+GCAKCAQGCICKG S+KCSCC
Sbjct: 1 MDPNCSCSPVGSCACAGSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCICKGTSDKCSCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|28866947 metallothionein 1F [Homo sapiens]
Length = 61
Score = 137 bits (346), Expect = 1e-33
Identities = 53/60 (88%), Positives = 57/60 (95%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC AG SC CAGSCKCK+CKCTSCKKSCCSCCP+GC+KCAQGC+CKGASEKCSCC
Sbjct: 1 MDPNCSCAAGVSCTCAGSCKCKECKCTSCKKSCCSCCPVGCSKCAQGCVCKGASEKCSCC 60
>gi|28866966 metallothionein 1M [Homo sapiens]
Length = 61
Score = 131 bits (329), Expect = 1e-31
Identities = 50/61 (81%), Positives = 53/61 (86%)
Query: 1 MDPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
MDPNCSC G SCAC GSCKCK+CKCTSCKKSCCSCCP+GCAKCA GC+CKG E CSCC
Sbjct: 1 MDPNCSCTTGVSCACTGSCKCKECKCTSCKKSCCSCCPVGCAKCAHGCVCKGTLENCSCC 60
Query: 61 A 61
A
Sbjct: 61 A 61
>gi|5174762 metallothionein 3 [Homo sapiens]
Length = 68
Score = 107 bits (268), Expect = 2e-24
Identities = 44/67 (65%), Positives = 49/67 (73%), Gaps = 7/67 (10%)
Query: 1 MDPN-CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGA------ 53
MDP C C +GGSC CA SCKC+ CKCTSCKKSCCSCCP C KCA+ C+CKG
Sbjct: 1 MDPETCPCPSGGSCTCADSCKCEGCKCTSCKKSCCSCCPAECEKCAKDCVCKGGEAAEAE 60
Query: 54 SEKCSCC 60
+EKCSCC
Sbjct: 61 AEKCSCC 67
>gi|14269578 metallothionein 4 [Homo sapiens]
Length = 62
Score = 106 bits (265), Expect = 4e-24
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 1 MDPN-CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
MDP C C +GG C C +CKC C C +C+KSCC CCP GCAKCA+GCICKG S+KCSC
Sbjct: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
Query: 60 C 60
C
Sbjct: 61 C 61
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 52.0 bits (123), Expect = 1e-07
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCCS--------CCPLGC-AKCAQGCICKGAS 54
C C +G GS C SC C +SC K CCS CC GC + C Q CK
Sbjct: 135 CCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCC 194
Query: 55 EKCSCC 60
+ SCC
Sbjct: 195 SQSSCC 200
Score = 50.1 bits (118), Expect = 4e-07
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCCSCCPLGC-AKCAQGCICKGASEKCSCC 60
C C +G GS C SC C +SC K C CC GC + C Q CK S + SCC
Sbjct: 174 CCCSSGCGSSCCQSSCCKPCCSQSSCCKPC--CCSSGCGSSCCQSSCCKPCSSQSSCC 229
Score = 48.1 bits (113), Expect = 1e-06
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 10 GGSCACAGSCKCKKCKCTSCKKSCC-------SCCPLGCAK--CAQGCICKGASEKCSCC 60
GGS GSC C +C SC K CC SCC C K C+Q CK + SCC
Sbjct: 115 GGSKGGCGSCGCSQC---SCYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCC 171
Score = 38.9 bits (89), Expect = 9e-04
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 3 PNCSCEAGGSCACA-GSCKCK---KCKCTSCKKSCCS-----CCPLGC-AKCAQGCICKG 52
P C + GSC + G C + K C SC S CS CC GC + C Q CK
Sbjct: 94 PVCCSSSCGSCGGSKGVCGFRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKP 153
Query: 53 ASEKCSCC 60
+ + SCC
Sbjct: 154 SCSQSSCC 161
Score = 36.6 bits (83), Expect = 0.004
Identities = 26/77 (33%), Positives = 28/77 (36%), Gaps = 20/77 (25%)
Query: 3 PNCSCEAGGSCA----CAGSCKCKKCKCTS-------CKKSCC--SCCPLGCAKC-AQGC 48
P CSC + GSC GSC K C S C SCC CC C C
Sbjct: 50 PACSCSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVCCSSSCGSCGGSKG 109
Query: 49 IC------KGASEKCSC 59
+C KG C C
Sbjct: 110 VCGFRGGSKGGCGSCGC 126
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 21/61 (34%)
Query: 5 CSCEAGGSCACAGSCK--------CKKCKCTS------CKKSCC-------SCCPLGCAK 43
CS G SC + CK CK C C+S C+ SCC SCC C +
Sbjct: 176 CSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICCQ 235
Query: 44 C 44
C
Sbjct: 236 C 236
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCK--KSCCSCCPLGCAKCAQGC---ICKGASEKC 57
P C C SC+ GSC K C SC K C C C C +C S C
Sbjct: 44 PVCCCVPACSCSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVC--CSSSC 101
Query: 58 SCC 60
C
Sbjct: 102 GSC 104
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 11/61 (18%)
Query: 11 GSCACAGSCKCKKCKCT--SCKKSCCSCCP------LGCAKCAQGC-ICKGASEKC--SC 59
GS C C CK C +C S C C C C GC C G+ C SC
Sbjct: 32 GSGCCVPVCCCKPVCCCVPACSCSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSC 91
Query: 60 C 60
C
Sbjct: 92 C 92
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 12/68 (17%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTS----CKKSCC--------SCCPLGCAKCAQGCICKG 52
CS +GG + G C C S C CC CC + C+ C G
Sbjct: 3 CSGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGSCGG 62
Query: 53 ASEKCSCC 60
+ C C
Sbjct: 63 SKGVCGSC 70
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGC------AKCAQGCICKGASEK 56
P CSC + G C GSC K C SC S CSCC C + C Q CK +
Sbjct: 50 PACSCSSCGKRGC-GSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQ 108
Query: 57 CSCC 60
CSCC
Sbjct: 109 CSCC 112
Score = 45.8 bits (107), Expect = 7e-06
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 11 GSCACAGSCKCKKCKCTS-CKKSC--CSCCPLGCAKCA--QGCICKGASEKCSCC 60
GSC C+ CK C C+S C SC CSCC C++C+ + C C + SCC
Sbjct: 73 GSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPC-CSSSGRGSSCC 126
Score = 45.4 bits (106), Expect = 1e-05
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 CS-CEAGGSCACAGSCKCKKCKCTSCKKSC--CSCCPLGCAKCAQGCICKGASEKCSCCA 61
CS C C C+ C C+C+ CK C CSCC C+ +G C +S CC+
Sbjct: 77 CSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCCS 136
Score = 43.1 bits (100), Expect = 5e-05
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 19/75 (25%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCC-------SCCPLGCAK-----------CA 45
C C +G GS C SC C SC K CC SCC C K C
Sbjct: 86 CCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGCGSSCC 145
Query: 46 QGCICKGASEKCSCC 60
Q CK + CC
Sbjct: 146 QSSCCKPCCSQSRCC 160
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCA---QGCICKGASEKCSCC 60
C G CA CK C SC SC GC C GC G S+ CSCC
Sbjct: 28 CRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQ-CSCC 83
Score = 37.7 bits (86), Expect = 0.002
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Query: 11 GSCACAGSC--KCKKC--KCTSCKKSCCSCCPLGCAK---CAQGCICKGASEKCSC 59
G C C+G C C C C SC C C P CA C C C A CSC
Sbjct: 2 GCCGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPA---CSC 54
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK---CAQGCI-CK 51
P CS GS C SC C + C SCC SCC C++ C C CK
Sbjct: 114 PCCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCK 168
Score = 35.8 bits (81), Expect = 0.008
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 10/64 (15%)
Query: 5 CSCEAGGSCACAGSC--KCKKC--KCTSCKKSCCS---CCPLGCAKCAQGCICKGASEK- 56
C C +GG + G C C C C C SCC+ CC C C C C ++
Sbjct: 4 CGC-SGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCC-CVPACSCSSCGKRG 61
Query: 57 CSCC 60
C C
Sbjct: 62 CGSC 65
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 50.1 bits (118), Expect = 4e-07
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCCSCCPLGC-AKCAQGCICKGASEKCSCC 60
CSC +G GS C SC C +SC K C CC GC + C Q CK + SCC
Sbjct: 123 CSCSSGCGSSCCQSSCCKPCCSQSSCCKPC--CCSSGCGSSCCQSSCCKPCCSQSSCC 178
Score = 47.0 bits (110), Expect = 3e-06
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 17/73 (23%)
Query: 5 CSCEAGGSCACAGSCK--------CKKCKCTS-CKKSCC--SCCPLGCAK--CAQGCIC- 50
CS G SC + CK CK C C+S C SCC SCC C++ C + C C
Sbjct: 96 CSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCS 155
Query: 51 KGASEKC---SCC 60
G C SCC
Sbjct: 156 SGCGSSCCQSSCC 168
Score = 46.6 bits (109), Expect = 4e-06
Identities = 29/78 (37%), Positives = 33/78 (42%), Gaps = 20/78 (25%)
Query: 3 PNCSCEAGGSC--------ACAGS------CKCKKCKCTSCKKSCCS-----CCPLGC-A 42
P CSC + GSC +C GS C K C SC S CS CC GC +
Sbjct: 43 PACSCSSCGSCGGSKGGRGSCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGS 102
Query: 43 KCAQGCICKGASEKCSCC 60
C Q CK + SCC
Sbjct: 103 SCCQSSCCKPCCSQSSCC 120
Score = 44.3 bits (103), Expect = 2e-05
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCCSCCPLGC-AKCAQGCICKGASEKCSCC 60
C C +G GS C SC C +SC K C C GC + C Q CK + SCC
Sbjct: 94 CCCSSGCGSSCCQSSCCKPCCSQSSCCKPCS--CSSGCGSSCCQSSCCKPCCSQSSCC 149
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
C GS C C CK C SC SC G +K +G C G+ C C
Sbjct: 21 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGRGS-CGGSKGDCGSC 73
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 11 GSCACAGSC--KCKKC--KCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
G C C+G C C C C C SC C P+ C K C+ + C C
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSSC--CVPICCCKPVCCCVPACSCSSCGSC 53
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKC 44
C C +G GS C SC CK C C +S C C P+ C +C
Sbjct: 152 CCCSSGCGSSCCQSSC-CKPC----CSQSSC-CVPI-CCQC 185
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCP-LGCAKCAQGCICKGASEKC 57
C GG + G C C C K C C P C+ C KG C
Sbjct: 10 CGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGRGSC 63
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 49.3 bits (116), Expect = 7e-07
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKC-TSCKKSCCSCCPLGC-AKCAQGCICKGASEKCSCC 60
C C +G GS C SC CK C C +SC K C CC GC + C Q C + SCC
Sbjct: 101 CCCSSGCGSSCCQSSC-CKPCCCQSSCCKPC--CCSSGCGSSCCQSSCCNPCCSQSSCC 156
Score = 45.1 bits (105), Expect = 1e-05
Identities = 29/78 (37%), Positives = 33/78 (42%), Gaps = 20/78 (25%)
Query: 3 PNCSCEAGGSC--------ACAGS------CKCKKCKCTSCKKSCCS-----CCPLGC-A 42
P CSC + GSC +C GS C K C SC S CS CC GC +
Sbjct: 50 PACSCSSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGS 109
Query: 43 KCAQGCICKGASEKCSCC 60
C Q CK + SCC
Sbjct: 110 SCCQSSCCKPCCCQSSCC 127
Score = 37.0 bits (84), Expect = 0.003
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 21/61 (34%)
Query: 5 CSCEAGGSCACAGSCK--------CKKCKCTS------CKKSCC-------SCCPLGCAK 43
CS G SC + CK CK C C+S C+ SCC SCC C +
Sbjct: 103 CSSGCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQ 162
Query: 44 C 44
C
Sbjct: 163 C 163
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCP-LGCAKCAQGCICKGASEKCSCC 60
C GG + G C C C K C C P C+ C C G+ C C
Sbjct: 17 CGSGCGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGS---CGGSKGGCGSC 70
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
C GS C C CK C SC SC G +K G C G+ C C
Sbjct: 28 CGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGGSKGGCGS-CGGSKGGCGSC 80
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 10/58 (17%)
Query: 5 CSCEAGGSCACAG-SCKCKKCK--CTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
C C G C G C C C C SCC P+ C C C C A CSC
Sbjct: 4 CGCSEGCGSGCGGCGSGCGGCGSGCGGCGSSCC--VPVCC--CKPVCCCVPA---CSC 54
Score = 29.6 bits (65), Expect = 0.54
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 7/38 (18%)
Query: 26 CTSCKKSC---CSCCPLGCAKCAQGCICKGASEKCSCC 60
C C + C C C GC C GC G+ SCC
Sbjct: 3 CCGCSEGCGSGCGGCGSGCGGCGSGCGGCGS----SCC 36
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 48.9 bits (115), Expect = 9e-07
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 5 CSCEAGGSCA-CAGSCKCKKCKCTSCKKSCCSCCPLGC-AKCAQGCICKGASEKCSCC 60
CSC + GSCA G C +C+ CK CCS GC + C Q CK + SCC
Sbjct: 215 CSCSSCGSCAGSKGGCGSSCSQCSCCKPCCCSS---GCGSSCCQSSCCKPCCSQSSCC 269
Score = 41.6 bits (96), Expect = 1e-04
Identities = 27/86 (31%), Positives = 30/86 (34%), Gaps = 27/86 (31%)
Query: 3 PNCSCEAGGSCAC-----AGSCKCKKCKCTSC---KKSCCSC----------------CP 38
P C C SC+ GSC C K C SC K C SC C
Sbjct: 139 PMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCG 198
Query: 39 LGCAKCAQGC---ICKGASEKCSCCA 61
GC C GC +C + C CA
Sbjct: 199 SGCGGCGSGCGVPVCCCSCSSCGSCA 224
Score = 40.8 bits (94), Expect = 2e-04
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
Query: 7 CEAGGSCACAGSCKCKK-------CKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
C GS C C CK C C+SC K C C GC+K A G C G+ C
Sbjct: 123 CGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSC--GCSKGACGS-CGGSKGGCGS 179
Query: 60 C 60
C
Sbjct: 180 C 180
Score = 35.8 bits (81), Expect = 0.008
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 24/78 (30%)
Query: 7 CEAGGSCACAGSCKCK-------KCKCTSC-----------KKSCCSC--CPLGCAKCA- 45
C GS C C CK C C+SC K C SC C GC C
Sbjct: 35 CGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGG 94
Query: 46 --QGC-ICKGASEKCSCC 60
GC C G+ C C
Sbjct: 95 SKGGCGSCGGSKGGCGSC 112
Score = 35.4 bits (80), Expect = 0.010
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 28/86 (32%)
Query: 3 PNCSCEA---------GGS---CACAGSCK--CKKC-----KCTSC---KKSCCSC---- 36
P CSC + GGS C G CK C C C SC K C SC
Sbjct: 57 PTCSCSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSK 116
Query: 37 --CPLGCAKCAQGCICKGASEKCSCC 60
C GC C C K CC
Sbjct: 117 GGCGSGCGGCGSSCCVPVCCCKPMCC 142
Score = 34.3 bits (77), Expect = 0.022
Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 14/62 (22%)
Query: 10 GGSCACAGSCKCKKCKCTS----CKKSCC---SCC-PLGCAKCAQGCIC----KGASEKC 57
GGS GSC K C S C SCC CC P+ C C C C KG C
Sbjct: 103 GGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCC--CVPACSCSSCGKGGCGSC 160
Query: 58 SC 59
C
Sbjct: 161 GC 162
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 4 NCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCP-LGCAKCAQG----CIC-KGASEKC 57
+C GG + G C C C K C C P C+ C +G C C KGA C
Sbjct: 111 SCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSC 170
Score = 32.3 bits (72), Expect = 0.084
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 19/58 (32%)
Query: 11 GSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC-----ICKGASEKCS---CC 60
G C C+G C S C C GC C GC C G+ C CC
Sbjct: 2 GCCGCSGGCG-----------SSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCC 48
Score = 32.3 bits (72), Expect = 0.084
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 15/72 (20%)
Query: 4 NCSCEAGGSCACAG------SCKCKKCKCTSCKKSCCSCC--PLGCAKCAQGCICKGAS- 54
+C GG +C G SC K C S C S C P+ C C+ C G+
Sbjct: 169 SCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKG 228
Query: 55 ------EKCSCC 60
+CSCC
Sbjct: 229 GCGSSCSQCSCC 240
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKC 44
C C +G GS C SC CK C C +S SCC C +C
Sbjct: 243 CCCSSGCGSSCCQSSC-CKPC----CSQS--SCCVPVCCQC 276
Score = 28.9 bits (63), Expect = 0.93
Identities = 28/116 (24%), Positives = 29/116 (25%), Gaps = 59/116 (50%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKS------------------------------ 32
P CSC + G C GSC C K C SC S
Sbjct: 145 PACSCSSCGKGGC-GSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGG 203
Query: 33 ----------CCSCCPLG--------CAKCAQGCIC-------KGASEKC---SCC 60
CCSC G C C C G C SCC
Sbjct: 204 CGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCC 259
>gi|60099478 keratin associated protein 5-6 [Homo sapiens]
Length = 129
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/78 (38%), Positives = 33/78 (42%), Gaps = 20/78 (25%)
Query: 3 PNCSCEAGGSCA----CAGSCK-----CKKCK-----CTSCKKSCCSCC-PLGC-----A 42
P CSC + GSC C GSC C C C SC S CSCC P C +
Sbjct: 43 PACSCTSCGSCGGSKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGCGS 102
Query: 43 KCAQGCICKGASEKCSCC 60
C Q CK + SCC
Sbjct: 103 SCCQSSCCKPCCSQASCC 120
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCC---PLGCAKCA---QGCICKGASEK 56
P C C+ C C +C C C K CC C GC C GC G S+
Sbjct: 31 PICCCKP--VCCCVPACSCTSCGSCGGSKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQ- 87
Query: 57 CSCC 60
CSCC
Sbjct: 88 CSCC 91
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 13/47 (27%)
Query: 11 GSCACAGSCKCKKCKCTS------CKKSCC-------SCCPLGCAKC 44
GSC C+ CK C C+S C+ SCC SCC C +C
Sbjct: 81 GSCGCSQCSCCKPCYCSSGCGSSCCQSSCCKPCCSQASCCVPICCQC 127
Score = 35.0 bits (79), Expect = 0.013
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 12/62 (19%)
Query: 11 GSCACAGSC--KCKKC--KCTSCKKSCC--------SCCPLGCAKCAQGCICKGASEKCS 58
G C C+G C C C C C SCC CC + C C G+ C
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCTSCGSCGGSKGCCG 61
Query: 59 CC 60
C
Sbjct: 62 SC 63
Score = 33.1 bits (74), Expect = 0.049
Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 8/64 (12%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCP-LGCAKC-----AQGCI--CKGASEK 56
C GG + G C C C K C C P C C ++GC C G+
Sbjct: 10 CGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCTSCGSCGGSKGCCGSCGGSKGG 69
Query: 57 CSCC 60
C C
Sbjct: 70 CGSC 73
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 5 CSCEAG-GSCACAGSCKCKKC--KCTSCKKSCCSC 36
C C +G GS C SC CK C + + C CC C
Sbjct: 94 CYCSSGCGSSCCQSSC-CKPCCSQASCCVPICCQC 127
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 46.6 bits (109), Expect = 4e-06
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 11 GSCACAGSCKCKKCKCTS------CKKSCCS--CCPLGCA--KCAQGCICKGASEKCSCC 60
GSC C+ S CK C C+S C+ SCC CC C C Q CK + +CC
Sbjct: 109 GSCGCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPCCCQSNCC 168
Score = 41.2 bits (95), Expect = 2e-04
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 20/78 (25%)
Query: 3 PNCSCEAGGSC--------ACAGS------CKCKKCKCTSCKKSCCSCCPLGC------A 42
P CSC + GSC +C GS C K C SC S SCC C +
Sbjct: 71 PACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCCCSSGCGS 130
Query: 43 KCAQGCICKGASEKCSCC 60
C Q CK + SCC
Sbjct: 131 SCCQSSCCKPCCCQSSCC 148
Score = 39.3 bits (90), Expect = 7e-04
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKC 57
C C +G GS C SC CK C C+ SCC CC C K C Q C +C
Sbjct: 122 CCCSSGCGSSCCQSSC-CKPC---CCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQC 175
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/50 (28%), Positives = 15/50 (30%), Gaps = 15/50 (30%)
Query: 26 CTSCKKSC---CSCCPLGCAKCAQGC------------ICKGASEKCSCC 60
C C + C C C C C GC C G S C C
Sbjct: 3 CCGCSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGC 52
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
C GG + G C C S + C S C GC+ GC + C C
Sbjct: 10 CGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCG-GCSSSCGGCGSRCYVPVCCC 63
Score = 25.8 bits (55), Expect = 7.9
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGC-AKC-AQGCICKGASE---KCSC 59
C GG + G C + C S C S C GC ++C C CK CSC
Sbjct: 17 CGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCG-GCGSRCYVPVCCCKPVCSWVPACSC 75
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 45.8 bits (107), Expect = 7e-06
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 11 GSCACAGSCKCKKCKCTS-----CKKSCCS--CCPLGCA--KCAQGCICKGASEKCSCC 60
GSC C+ CK C C+S C+ SCC+ CC C C Q CK + SCC
Sbjct: 135 GSCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVPVCCQSSCCKPCCCQSSCC 193
Score = 43.1 bits (100), Expect = 5e-05
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 10 GGSCACAGSCKCKKCKCTSCKKSCCS-----CCPLGCAKCAQGCICKGASEKCSCC 60
GGS GSC K C SC S C+ CC GC C Q C + SCC
Sbjct: 118 GGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCC 173
Score = 38.5 bits (88), Expect = 0.001
Identities = 25/67 (37%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSC---KKSCCSC--CPLGCAKCA---QGC-ICKGA 53
P C C SC+ GSC K C SC K C SC GC C GC C G+
Sbjct: 51 PVCCCVPACSCSSCGSCGGSKGDCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGS 110
Query: 54 SEKCSCC 60
C C
Sbjct: 111 KGGCGSC 117
Score = 37.7 bits (86), Expect = 0.002
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKC 57
C C +G C SC C C C+ SCC CC C K C Q C +C
Sbjct: 148 CCCSSGCGSCCQSSC-CNPC---CCQSSCCVPVCCQSSCCKPCCCQSSCCVPVCCQC 200
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 10 GGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAK--CAQGCICKGASEKC---SCC 60
GGS GSC K C SC S C GC++ C + C C C SCC
Sbjct: 108 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQSSCC 163
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 5 CS-CEAGGSCACAGSCK--CKKCKCTSCKKSCC--SCC-PLGC-AKCAQGCICKGASEKC 57
CS C C C+ C C+ C C CC SCC P+ C + C + C C+ +
Sbjct: 139 CSQCNCCKPCCCSSGCGSCCQSSCCNPC---CCQSSCCVPVCCQSSCCKPCCCQSSCCVP 195
Query: 58 SCC 60
CC
Sbjct: 196 VCC 198
Score = 33.9 bits (76), Expect = 0.029
Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 10 GGSCACAGSCKCKKCKCTSC---KKSCCSC--CPLGCAKCA---QGCICKGASEKCSCC 60
GGS GSC K C SC K C SC GC C GC G S+ C+CC
Sbjct: 88 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQ-CNCC 145
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCP-LGCAKCAQGCICKGASEKCSCC 60
C GG + G C C C K C C P C+ C C G+ C C
Sbjct: 24 CGSGCGGYGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGS---CGGSKGDCGSC 77
Score = 32.7 bits (73), Expect = 0.064
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
C GS C C CK C SC SC G +K G C G+ C C
Sbjct: 35 CGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGGSKGDCGS-CGGSKGGCGSC 87
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 19/58 (32%)
Query: 11 GSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC-----ICKGASEKCS---CC 60
G C C+G C S C C GC C GC C G C CC
Sbjct: 2 GCCGCSGGCG-----------SGCGGCGSGCGGCGSGCGGYGSGCGGCGSSCCVPVCC 48
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 45.8 bits (107), Expect = 7e-06
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 20/78 (25%)
Query: 3 PNCSCEAGGSCAC----AGSC-----KCKKCKC--TSCKKSCCS-------CCPLGCAK- 43
P CSC + GSC GSC C C C ++C K CCS CC C+K
Sbjct: 50 PACSCSSCGSCGGSKGGCGSCGSSKGGCGSCGCSQSNCCKPCCSSSGCGSFCCQSSCSKP 109
Query: 44 -CAQGCICKGASEKCSCC 60
C Q C+ + K CC
Sbjct: 110 CCCQSSCCQSSCCKPCCC 127
Score = 39.7 bits (91), Expect = 5e-04
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKC------TSCKKSCC---SCCPLGCAK--CAQGCICK 51
P CS GS C SC K C C +SC K CC SCC C K C Q C
Sbjct: 90 PCCSSSGCGSFCCQSSCS-KPCCCQSSCCQSSCCKPCCCQSSCCQSSCFKPCCCQSSCCV 148
Query: 52 GASEKC 57
+C
Sbjct: 149 PVCCQC 154
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCP-LGCAKCAQGCICKGASEKCSCC 60
C +GG + G C C C K C C P C+ C C G+ C C
Sbjct: 17 CGSGSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGS---CGGSKGGCGSC 70
Score = 33.1 bits (74), Expect = 0.049
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAK--CAQGCICKGASEKCSC 59
C GS C C CK C SC SC G +K C KG C C
Sbjct: 28 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSSKGGCGSCGC 82
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 45.1 bits (105), Expect = 1e-05
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 11 GSCACAGSCKCKKCKCTS------CKKSCCS--CCPLGC-AKCAQGCICKGASEKCSCC 60
GSC C+ CK C C+S C+ SCC C GC + C Q CK + SCC
Sbjct: 192 GSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCC 250
Score = 45.1 bits (105), Expect = 1e-05
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
P CS GS C SC C +SC K CCS G + C C C + SCC
Sbjct: 223 PCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSC-CNPCCSQSSCC 279
Score = 43.5 bits (101), Expect = 4e-05
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK---CAQGCICKGASEKC- 57
C C +G GS C SC C + C SCC SCC C + C C G C
Sbjct: 205 CCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCC 264
Query: 58 --SCC 60
SCC
Sbjct: 265 QSSCC 269
Score = 39.7 bits (91), Expect = 5e-04
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 10 GGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKC--SCCA 61
GGS GSC K C SC S CSCC C C+ GC C CC+
Sbjct: 175 GGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCC--CSSGCGSSCCQSSCCKPCCS 226
Score = 39.3 bits (90), Expect = 7e-04
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 13/69 (18%)
Query: 5 CS-CEAGGSCACAGSCKCKKCKCTSCKKSC------CSCCPLGCAK--CAQGCICKG--A 53
CS C C C+ C C+ + CK C SCC C K C Q CK +
Sbjct: 196 CSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCS 255
Query: 54 SEKC--SCC 60
S C SCC
Sbjct: 256 SSGCGSSCC 264
Score = 36.6 bits (83), Expect = 0.004
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 10 GGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCA--QGCIC-KGASEKC---SCC 60
GGS GSC K C SC S C GC++C+ + C C G C SCC
Sbjct: 165 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCC 221
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 9/67 (13%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSC---KKSCCSC--CPLGCAKCA---QGC-ICKGA 53
P C C SC+ GSC K SC K C SC GC C GC C G+
Sbjct: 58 PVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGS 117
Query: 54 SEKCSCC 60
C C
Sbjct: 118 KGGCGSC 124
Score = 33.9 bits (76), Expect = 0.029
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 10 GGSCACAGSCKCKKCKCTSC---KKSCCSC--CPLGCAKCA---QGCI-CKGASEKCSCC 60
GGS GSC K C SC K C SC GC C GC+ C G+ C C
Sbjct: 105 GGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSC 164
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
C GS C C CK C SC SC G +K G C G+ C C
Sbjct: 42 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGS-CGGSKGGCVSC 94
Score = 33.1 bits (74), Expect = 0.049
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 13/56 (23%)
Query: 10 GGSCACAGSCKCKKCKCTSC---KKSCCSC--CPLGCAKCAQGCICKGASEKCSCC 60
GGS GSC K C SC K C SC GC C GC +CSCC
Sbjct: 155 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSC--GC------SQCSCC 202
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 16/55 (29%)
Query: 11 GSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC-----ICKGASEKCSCC 60
G C C+G C S C C GC C GC C G C C
Sbjct: 2 GCCGCSGGCG-----------SGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGC 45
Score = 31.2 bits (69), Expect = 0.19
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 10 GGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCI-CKGASEKCSCC 60
GGS GSC K C SC S C G +K GC+ C G+ C C
Sbjct: 95 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSK--GGCVSCGGSKGGCGSC 144
Score = 30.4 bits (67), Expect = 0.32
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKC 44
P CS GS C SC C C C +S SCC C +C
Sbjct: 252 PCCSSSGCGSSCCQSSC-CNPC----CSQS--SCCVPVCCQC 286
Score = 30.0 bits (66), Expect = 0.42
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
Query: 5 CSCEAGGSCACAGSC--KCKKC--KCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
C GG + G C C C C C SC C P+ C K C+ + C C
Sbjct: 17 CGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSC--CVPICCCKPVCCCVPACSCSSCGSC 74
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 13/65 (20%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTSCKKSCCS--CCPLGCAK---CAQGC---ICKGASE 55
C C +G GS C SC CK C+ SCC CC C K C GC C+ +
Sbjct: 163 CCCSSGCGSSCCQSSC----CKPYCCQSSCCKPYCCQSSCCKPCSCFSGCGSSCCQSSCY 218
Query: 56 KCSCC 60
K CC
Sbjct: 219 KPCCC 223
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 4 NCSCEAGGSCACAGS---CKCKKCKCTSCKKSCC-------SCCPLGCAK--CAQGCICK 51
+C GG +C GS C C +SC K CC SCC C K C Q CK
Sbjct: 131 SCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCCCSSGCGSSCCQSSCCKPYCCQSSCCK 190
Query: 52 GASEKCSCC 60
+ SCC
Sbjct: 191 PYCCQSSCC 199
Score = 42.7 bits (99), Expect = 6e-05
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 14/59 (23%)
Query: 11 GSCACAGSCKCKKCKCTS------CKKSCCS--CCPLGCAK--CAQGCICKGASEKCSC 59
GS C+ S CK C C+S C+ SCC CC C K C Q CK CSC
Sbjct: 150 GSYGCSQSSCCKPCCCSSGCGSSCCQSSCCKPYCCQSSCCKPYCCQSSCCK----PCSC 204
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 16/67 (23%)
Query: 10 GGSCACAGSCKCKKCKCTSC-------------KKSCCS--CCPLGC-AKCAQGCICKGA 53
GGS GSC K C SC + SCC CC GC + C Q CK
Sbjct: 123 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCCCSSGCGSSCCQSSCCKPY 182
Query: 54 SEKCSCC 60
+ SCC
Sbjct: 183 CCQSSCC 189
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCA---QGCICKGASE-KCSCC 60
C GS C C CK C SC SC GC C +GC+ G S+ C C
Sbjct: 55 CGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGSKRGCVSCGVSKGACGSC 112
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSC---KKSCCSC--CPLGCAKCA---QGC-ICKGA 53
P CSC + G C GSC K C SC K +C SC GC C GC C G+
Sbjct: 77 PACSCSSCGKGGC-GSCGGSKRGCVSCGVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGS 135
Query: 54 SEKCSCC 60
C C
Sbjct: 136 KGGCGSC 142
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKG---ASEKCSC 59
C GG + G C C C C C G C C CK CSC
Sbjct: 24 CGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSC 81
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 10/52 (19%)
Query: 11 GSCACAGSCKCKKCKCTSC--KKSCCSCCPLGCAKCAQGCICKGASEKCSCC 60
G C C+G C + C + S C C GC C G C G C C
Sbjct: 2 GCCGCSGGCG------SGCGGRGSGCGGCGSGCGGCGSG--CGGCGSGCGGC 45
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 5 CSCEAG-GSCACAGSCKCKKCKCTS--CKKSCCSC 36
CSC +G GS C SC K C C S C CC C
Sbjct: 202 CSCFSGCGSSCCQSSC-YKPCCCQSSCCVPVCCQC 235
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSC--CPLGCAKC---AQGCICKGASEKCSC 59
C G C C C C C C C GCA C GC K C
Sbjct: 14 CGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMC 73
Query: 60 C 60
C
Sbjct: 74 C 74
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 5 CSCEAGGSCACAGSCKC----KKCKCTSCKKSCC--SCCPLGCAKCAQGCICKGASEKCS 58
C C+ G C C GSC C C + C SCC SCC GC C C G S
Sbjct: 22 CCCQPG-CCGCCGSC-CGCGGSGCGGSGCGGSCCGSSCCGSGCGGCGGCGGCGGGCCGSS 79
Query: 59 CC 60
CC
Sbjct: 80 CC 81
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKC---SCC 60
C + C +C C++C C+ CC CC C GC G C SCC
Sbjct: 4 CPGDCFTCCTQEQNC-CEEC---CCQPGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCC 58
Score = 29.3 bits (64), Expect = 0.71
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 4 NCSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAKCAQGCICK 51
+C G C G C C + C SCC CC C + C K
Sbjct: 56 SCCGSGCGGCGGCGGCGGGCCGSSCCGSSCCGSGCCGPVCCQPTPICDTK 105
>gi|154146260 keratin associated protein 4-3 [Homo sapiens]
Length = 195
Score = 42.7 bits (99), Expect = 6e-05
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAKCAQGCICKGASEKCSCC 60
SC + CK C+ T C+ SCC SCC C C C CK + + +CC
Sbjct: 53 SCCISSCCKPSCCRTTCCRPSCCISSCCRPSC--CISSC-CKPSCCRTTCC 100
Score = 42.4 bits (98), Expect = 8e-05
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAKCAQGCICKGASEKCSCC 60
SC + CK C+ T C+ SCC SCC C C C CK + + +CC
Sbjct: 83 SCCISSCCKPSCCRTTCCRPSCCISSCCRPSC--CISSC-CKPSCCQTTCC 130
Score = 40.8 bits (94), Expect = 2e-04
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 2 DPNCSCEAGGSCACAGSCKCKK--CKCTSCKKSCC--SCCPLGCAKCAQGCICKGASEKC 57
D +C G C SC C+ C+ T C+ SCC SCC C C C CK + +
Sbjct: 12 DQSCGQGLGQESCCRPSC-CQTTCCRTTCCRPSCCISSCCRPSC--CISSC-CKPSCCRT 67
Query: 58 SCC 60
+CC
Sbjct: 68 TCC 70
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC-------SCCPLGC--AKCAQGCICKGASEKCSCC 60
SC + C+ C + CK SCC SCC C +C Q C+ A SCC
Sbjct: 103 SCCISSCCRPSCCISSCCKPSCCQTTCCRPSCCISSCYRPQCCQPSCCRPACCISSCC 160
Score = 38.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGC--AKCAQGCICKGASEKCSCC 60
SC + C+ C + CK SCC +CC C + C + C + K SCC
Sbjct: 43 SCCISSCCRPSCCISSCCKPSCCRTTCCRPSCCISSCCRPSCCISSCCKPSCC 95
Score = 38.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGC--AKCAQGCICKGASEKCSCC 60
SC + C+ C + CK SCC +CC C + C + C + K SCC
Sbjct: 73 SCCISSCCRPSCCISSCCKPSCCRTTCCRPSCCISSCCRPSCCISSCCKPSCC 125
Score = 32.7 bits (73), Expect = 0.064
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSC-KKSCC--SCCPLGCAK--CAQGCICKGASEKC 57
P+C C+ + C +C C +SC + SCC SCC C + C + C + +
Sbjct: 27 PSC-CQ---TTCCRTTCCRPSCCISSCCRPSCCISSCCKPSCCRTTCCRPSCCISSCCRP 82
Query: 58 SCC 60
SCC
Sbjct: 83 SCC 85
Score = 32.7 bits (73), Expect = 0.064
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 6 SCEAGGSC---ACAGSCKCKKCKCTSC-KKSCC--SCCPLGCAK--CAQGCICKGASEKC 57
SC C C +C C +SC + SCC SCC C + C + C + +
Sbjct: 53 SCCISSCCKPSCCRTTCCRPSCCISSCCRPSCCISSCCKPSCCRTTCCRPSCCISSCCRP 112
Query: 58 SCC 60
SCC
Sbjct: 113 SCC 115
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Query: 6 SCEAGGSC---ACAGSCKCKKCKCTSC-KKSCC--SCCPLGCAK--CAQGCICKGASEKC 57
SC C C +C C +SC + SCC SCC C + C + C + +
Sbjct: 83 SCCISSCCKPSCCRTTCCRPSCCISSCCRPSCCISSCCKPSCCQTTCCRPSCCISSCYRP 142
Query: 58 SCC 60
CC
Sbjct: 143 QCC 145
Score = 27.7 bits (60), Expect = 2.1
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 13/55 (23%)
Query: 15 CAGSCKCKKCKCTSC-KKSCC--SC-CPLGCAK--CAQGC---ICKGASEKCSCC 60
C SC C +SC SCC SC CP C C C IC G+ SCC
Sbjct: 145 CQPSCCRPACCISSCCHPSCCVSSCRCPFSCPTTCCRTTCFHPICCGS----SCC 195
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCC 37
P+C SC C SC C+ T CC SCC
Sbjct: 162 PSCCVS---SCRCPFSCPTTCCRTTCFHPICCGSSCC 195
>gi|46250735 keratin associated protein 10-2 [Homo sapiens]
Length = 255
Score = 42.4 bits (98), Expect = 8e-05
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC---SCCPLGCAKCAQGCICKGASEKC 57
P CS E+ SC SC+ C + C++SCC C P+ C +C GAS C
Sbjct: 153 PTCS-ESSSSCCQQSSCQPACCTSSPCQQSCCVSVCCKPVCCKSICCVPVCSGASSPC 209
Score = 40.0 bits (92), Expect = 4e-04
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 19/71 (26%)
Query: 6 SCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC--------ICKGASEKC 57
+C++G + +C SC C+ +SC+ +CC+ P A C C +C GAS C
Sbjct: 66 ACQSGCTSSCTPSC----CQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCCGASSCC 121
Query: 58 -------SCCA 61
+CCA
Sbjct: 122 QQSSCQPACCA 132
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 7 CEAGGSCACAGSCKCKKCKCTSCKKSC-------CSCCPLGCAKCAQGCICKGASEKCSC 59
C SC SC+ C +SC++SC CC C++ + C C+ +S + +C
Sbjct: 114 CCGASSCCQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSC-CQQSSCQPAC 172
Query: 60 C 60
C
Sbjct: 173 C 173
Score = 32.3 bits (72), Expect = 0.084
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 17/74 (22%)
Query: 4 NCSCEAGGSCACAGSCKCKKC--------KCTSCKKSCC---SCCPLGC--AKCAQGC-- 48
+C S +C SC+ C C+ SCC SC P C + C Q C
Sbjct: 125 SCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCTSSPCQQSCCV 184
Query: 49 --ICKGASEKCSCC 60
CK K CC
Sbjct: 185 SVCCKPVCCKSICC 198
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 10/68 (14%)
Query: 3 PNCSCEAG-GSCACAGSCKCKKCKCT--SCKKS-CC------SCCPLGCAKCAQGCICKG 52
P CE G+ +C C CT SC S CC S C GC C+
Sbjct: 23 PESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQAACEPSACQSGCTSSCTPSCCQQ 82
Query: 53 ASEKCSCC 60
+S + +CC
Sbjct: 83 SSCQPACC 90
Score = 26.6 bits (57), Expect = 4.6
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 10/62 (16%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC---SCCPLGCAK-CAQGCICKGASEKCS 58
P CS G S C C+ CTS SCC S L C C++ C +S + S
Sbjct: 200 PVCS---GASSPCCQQSSCQPACCTS---SCCRPSSSVSLLCRPVCSRPASCSFSSGQKS 253
Query: 59 CC 60
C
Sbjct: 254 SC 255
>gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1
[Homo sapiens]
Length = 210
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 5 CSCEAGGSCACAGSCKCKK--CKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCS 58
CS + G C +C C+ C+ T C+ +CC SCC C + C Q C+ + S
Sbjct: 10 CSDQGCGQDLCQETC-CRPSCCETTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPS 68
Query: 59 CC 60
CC
Sbjct: 69 CC 70
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCS--CCPLGCAK--CAQGCICKGASEKCS 58
P+C CE +C C+ C + C+ CC CC C++ C Q C+ + S
Sbjct: 27 PSC-CET--TCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPSCCQTTCCRTTCYRPS 83
Query: 59 CC 60
CC
Sbjct: 84 CC 85
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCC---SCCPLGCAK--CAQGCICKGASEKCSC 59
C + S C +C C T+C ++ C SCC C + C Q C+ + SC
Sbjct: 50 CRPQCCQSVCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPVCCQPTCCRPSC 109
Query: 60 C 60
C
Sbjct: 110 C 110
Score = 34.7 bits (78), Expect = 0.017
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGC-------AKCAQGCICKGASEKCSCC 60
SC + C+ + C+ C+ +CC SCC C + C + C + K CC
Sbjct: 83 SCCVSSCCRPQCCQPVCCQPTCCRPSCCETTCCHPRCCISSCCRPSCCVSSCCKPQCC 140
Score = 34.7 bits (78), Expect = 0.017
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 9/48 (18%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC-------SCCPLGC--AKCAQGCIC 50
SC + CK + C+ C+ +CC SCC C + C + C C
Sbjct: 128 SCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCESSCCRPCCC 175
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 12 SCACAGSCKCKKCKCTSC-KKSCC--SCCPLGCAK--CAQGCICKGASEKCSCC 60
SC C +C +C +SC + SCC SCC C + C Q C+ + SCC
Sbjct: 108 SC-CETTCCHPRCCISSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCC 160
Score = 33.5 bits (75), Expect = 0.038
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCSCC 60
S C C + C C+++CC SCC C + C + C + + CC
Sbjct: 3 SSCCGSVCSDQGCGQDLCQETCCRPSCCETTCCRTTCCRPSCCVSSCCRPQCC 55
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC 48
PNC C SC+ + C+ C+ + C+ CC G C C
Sbjct: 147 PNC-CRP--SCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTC 189
>gi|225690551 keratin associated protein 4-9 [Homo sapiens]
Length = 210
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 5 CSCEAGGSCACAGSCKCKK--CKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCS 58
CS + G C +C C+ C+ T C+ +CC SCC C + C Q C+ + S
Sbjct: 10 CSDQGCGQDLCQETC-CRPSCCETTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPS 68
Query: 59 CC 60
CC
Sbjct: 69 CC 70
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCS--CCPLGCAK--CAQGCICKGASEKCS 58
P+C CE +C C+ C + C+ CC CC C++ C Q C+ + S
Sbjct: 27 PSC-CET--TCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPSCCQTTCCRTTCYRPS 83
Query: 59 CC 60
CC
Sbjct: 84 CC 85
Score = 35.4 bits (80), Expect = 0.010
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCC---SCCPLGCAK--CAQGCICKGASEKCSC 59
C + S C +C C T+C ++ C SCC C + C Q C+ + SC
Sbjct: 50 CRPQCCQSVCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPACCQPTCCRPSC 109
Query: 60 C 60
C
Sbjct: 110 C 110
Score = 34.7 bits (78), Expect = 0.017
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGC-------AKCAQGCICKGASEKCSCC 60
SC + C+ + C+ C+ +CC SCC C + C + C + K CC
Sbjct: 83 SCCVSSCCRPQCCQPACCQPTCCRPSCCETTCCHPRCCISSCCRPSCCVSSCCKPQCC 140
Score = 34.7 bits (78), Expect = 0.017
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 9/48 (18%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC-------SCCPLGC--AKCAQGCIC 50
SC + CK + C+ C+ +CC SCC C + C + C C
Sbjct: 128 SCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCESSCCRPCCC 175
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 12 SCACAGSCKCKKCKCTSC-KKSCC--SCCPLGCAK--CAQGCICKGASEKCSCC 60
SC C +C +C +SC + SCC SCC C + C Q C+ + SCC
Sbjct: 108 SC-CETTCCHPRCCISSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCC 160
Score = 33.5 bits (75), Expect = 0.038
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCSCC 60
S C C + C C+++CC SCC C + C + C + + CC
Sbjct: 3 SSCCGSVCSDQGCGQDLCQETCCRPSCCETTCCRTTCCRPSCCVSSCCRPQCC 55
Score = 33.1 bits (74), Expect = 0.049
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 8/60 (13%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAKCAQGCICKGASEKCSCC 60
P C C+ +C C+ C+ T C CC SCC C C C CK + CC
Sbjct: 92 PQC-CQP--ACCQPTCCRPSCCETTCCHPRCCISSCCRPSC--CVSSC-CKPQCCQSVCC 145
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC 48
PNC C SC+ + C+ C+ + C+ CC G C C
Sbjct: 147 PNC-CRP--SCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTC 189
>gi|118572608 keratin associated protein 4-5 [Homo sapiens]
Length = 181
Score = 41.6 bits (96), Expect = 1e-04
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCS 58
P C CE+ SC C+ C+ T C+ +CC SCC C + C Q C+ + S
Sbjct: 68 PYC-CES--SCCRPCCCQTTCCRTTCCRTTCCCPSCCVSSCCRPQCCQSVCCQPTCCRPS 124
Query: 59 CC 60
CC
Sbjct: 125 CC 126
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCSCC 60
SC C+ C+ T C+ +CC SCC C + C Q C + SCC
Sbjct: 14 SCGLENCCRPSCCQTTCCRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCISSCC 66
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 19/68 (27%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC------------SCCPLGCAK-------CAQGCICKG 52
SC C+ C+ + CK CC SCC C + C + C C+
Sbjct: 24 SCCQTTCCRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCISSCCRPYCCESSCCRPCCCQT 83
Query: 53 ASEKCSCC 60
+ +CC
Sbjct: 84 TCCRTTCC 91
Score = 33.9 bits (76), Expect = 0.029
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAKCAQGCICKGASEKCSCC 60
SC + C+ C+ + C+ CC +CC C C C C SCC
Sbjct: 59 SCCISSCCRPYCCESSCCRPCCCQTTCCRTTC--CRTTCCCPSCCVS-SCC 106
Score = 30.8 bits (68), Expect = 0.24
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
Query: 3 PNCSCEAGGSCACAGSCKCKK--CKCTSCKKSCC--SCCPLGCAKCAQGCICKGASEKCS 58
P+C + C S C+ C+ + C SCC SCC C C C + + S
Sbjct: 98 PSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSCCHPSCCESSC--CRPCCCVRPVCGRVS 155
Query: 59 C 59
C
Sbjct: 156 C 156
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 8/50 (16%)
Query: 15 CAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCSCC 60
C SC C C+ CC SCC C + C + C+ SCC
Sbjct: 56 CHPSCCISSC----CRPYCCESSCCRPCCCQTTCCRTTCCRTTCCCPSCC 101
Score = 25.8 bits (55), Expect = 7.9
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC 48
SC + C C+ + C+ CC G C C
Sbjct: 124 SCCISSCCHPSCCESSCCRPCCCVRPVCGRVSCHTTC 160
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 41.2 bits (95), Expect = 2e-04
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 17/72 (23%)
Query: 5 CSCEAGG----SCACAGSCKCKKCKC-------TSCK------KSCCSCCPLGCAKCAQG 47
CSC++ G SC+C S C C TSC S CSC G + +
Sbjct: 213 CSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSGTSSTSCS 272
Query: 48 CICKGASEKCSC 59
C G S CSC
Sbjct: 273 CQSSGTSSTCSC 284
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
CSC++ G+ + + SC+ +S S CSC G + + C G S CSC
Sbjct: 190 CSCQSSGTSSTSYSCQ------SSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSC 238
Score = 35.4 bits (80), Expect = 0.010
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 16/72 (22%)
Query: 4 NCSCEAG---GSCACAGSCKCKKCKC-------TSCK------KSCCSCCPLGCAKCAQG 47
+CSC++ +C+C S C C TSC S CSC G + +
Sbjct: 17 SCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSCS 76
Query: 48 CICKGASEKCSC 59
C S CSC
Sbjct: 77 CQSSETSSTCSC 88
Score = 35.0 bits (79), Expect = 0.013
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 5 CSCEAGG----SCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKG---ASEKC 57
CSC++ G SC+C S C C S S S C ++ + C C+ +S C
Sbjct: 63 CSCQSSGTSSTSCSCQSSETSSTCSCQSSGTSSTS-CSWQFSRTSSTCCCQSSRTSSTSC 121
Query: 58 SC 59
SC
Sbjct: 122 SC 123
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 17/72 (23%)
Query: 5 CSCE----AGGSCACAGSCKCKKCKC-------TSCK------KSCCSCCPLGCAKCAQG 47
CSC+ + SC+ S C C TSC S CSC G + +
Sbjct: 144 CSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSYS 203
Query: 48 CICKGASEKCSC 59
C G S CSC
Sbjct: 204 CQSSGTSSTCSC 215
Score = 34.3 bits (77), Expect = 0.022
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 5 CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
CSC++ G+ + + SC+ +S S CSC G + + C S CSC
Sbjct: 259 CSCQSSGTSSTSCSCQ------SSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSC 307
Score = 34.3 bits (77), Expect = 0.022
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 19/74 (25%)
Query: 5 CSCEAGG----SCACAGSCKCKKCKC-------TSCK------KSCCSCCPLGCAKCAQG 47
CSC++ G SC+C S C C TSC S CSC G + +
Sbjct: 282 CSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTS--STS 339
Query: 48 CICKGASEKCSCCA 61
CIC + + C+
Sbjct: 340 CICWSSGTSSTSCS 353
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 5 CSCEAGG----SCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGA--SEKCS 58
CSC++ G SC+ S C C S + S SC + C C+ + S CS
Sbjct: 86 CSCQSSGTSSTSCSWQFSRTSSTCCCQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCS 145
Query: 59 C 59
C
Sbjct: 146 C 146
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 4 NCSCEAGG----SCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
+CSC++ SC+C S C C + + S S C ++ + C C+ + +
Sbjct: 120 SCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTS-CSYQSSRTSSTCSCQSSGTSSTS 178
Query: 60 C 60
C
Sbjct: 179 C 179
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 9 AGGSCACAGSCKCKKCKCTSCK-KSCCSCCPLGCAKCAQGCICKGASEKCSC 59
+ SC+C S C C S + S CSC G + + S CSC
Sbjct: 14 SSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRTSSTCSC 65
Score = 29.3 bits (64), Expect = 0.71
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Query: 5 CSCE----AGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGC---ICKGASEKC 57
CSC+ + SC+C S C C S S SC + C +S C
Sbjct: 305 CSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTSCICWSSGTSSTSCSGRFSGTSSTSC 364
Query: 58 SC 59
+C
Sbjct: 365 NC 366
>gi|14210534 keratin associated protein 4.4 [Homo sapiens]
Length = 166
Score = 41.2 bits (95), Expect = 2e-04
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCSCC 60
SC + C+ + C+ T C+ +CC SCC C + C Q C+ + CC
Sbjct: 39 SCCVSSCCRPQCCQTTCCRTTCCHPSCCVSSCCRPQCCQSVCCQPTCCRPQCC 91
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 2 DPNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKC 57
D C E +C C+ C+ T C+ SCC SCC C + C + C +
Sbjct: 12 DQGCGLE---NCCRPSYCQTTCCRTTCCRPSCCVSSCCRPQCCQTTCCRTTCCHPSCCVS 68
Query: 58 SCC 60
SCC
Sbjct: 69 SCC 71
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Query: 3 PNCSCEAGGSCACAGSCKCKKCKCTSCKKSCC--SCCPLGCAK--CAQGCICKGASEKCS 58
P+C SC C+ C+ T C+ CC +CC C + C + C+ + +
Sbjct: 63 PSCCVS---SCCRPQCCQSVCCQPTCCRPQCCQTTCCRTTCCRPSCCRPQCCQSVCCQPT 119
Query: 59 CC 60
CC
Sbjct: 120 CC 121
Score = 33.1 bits (74), Expect = 0.049
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 14/63 (22%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCCS-------------CCPLGC-AKCAQGCICKGASEKC 57
+C C+ C+ T C+ SCC CCP C + C + C+ +
Sbjct: 84 TCCRPQCCQTTCCRTTCCRPSCCRPQCCQSVCCQPTCCCPSYCVSSCCRPQCCQTTCCRT 143
Query: 58 SCC 60
+CC
Sbjct: 144 TCC 146
Score = 30.8 bits (68), Expect = 0.24
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 9/48 (18%)
Query: 12 SCACAGSCKCKKCKCTSCKKSCC-------SCCPLGCAK--CAQGCIC 50
+C C C C+ C+ +CC SCC C + C Q C
Sbjct: 119 TCCCPSYCVSSCCRPQCCQTTCCRTTCCRPSCCVSRCYRPHCGQSLCC 166
Score = 29.6 bits (65), Expect = 0.54
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 3 PNCSCEAG--GSCACAGSCKCKKCKCTSCKKSCC 34
P C C + SC C+ C+ T C+ SCC
Sbjct: 118 PTCCCPSYCVSSCCRPQCCQTTCCRTTCCRPSCC 151
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.134 0.549
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,207,087
Number of Sequences: 37866
Number of extensions: 155443
Number of successful extensions: 3632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 1196
Number of HSP's gapped (non-prelim): 1358
length of query: 61
length of database: 18,247,518
effective HSP length: 34
effective length of query: 27
effective length of database: 16,960,074
effective search space: 457921998
effective search space used: 457921998
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.