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Search of human proteins with 239749340
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749340 PREDICTED: hypothetical protein XP_002347000 [Homo
sapiens]
(349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749340 PREDICTED: hypothetical protein XP_002347000 [Homo ... 747 0.0
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 64 2e-10
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 64 2e-10
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 59 8e-09
gi|239755199 PREDICTED: hypothetical protein [Homo sapiens] 54 2e-07
gi|239753972 PREDICTED: hypothetical protein [Homo sapiens] 52 6e-07
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 52 1e-06
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 51 1e-06
gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo ... 50 4e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 2e-05
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 47 3e-05
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 47 3e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 47 3e-05
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 47 3e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 46 4e-05
gi|116284392 mucin 2 precursor [Homo sapiens] 46 6e-05
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 46 6e-05
gi|54860079 nadrin isoform 1 [Homo sapiens] 44 2e-04
gi|54860105 nadrin isoform 2 [Homo sapiens] 44 2e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 44 2e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 44 2e-04
gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens] 44 2e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 42 6e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 42 6e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 42 6e-04
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 41 0.001
gi|239749927 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 40 0.003
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 40 0.004
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.005
>gi|239749340 PREDICTED: hypothetical protein XP_002347000 [Homo
sapiens]
Length = 349
Score = 747 bits (1928), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MGLEHGVGEQVQPRGLQELWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQ 60
MGLEHGVGEQVQPRGLQELWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQ
Sbjct: 1 MGLEHGVGEQVQPRGLQELWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQ 60
Query: 61 NGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRI 120
NGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRI
Sbjct: 61 NGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRI 120
Query: 121 ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTA 180
ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTA
Sbjct: 121 ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTA 180
Query: 181 PFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAP 240
PFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAP
Sbjct: 181 PFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAP 240
Query: 241 FQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPS 300
FQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPS
Sbjct: 241 FQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPS 300
Query: 301 RTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAPFQDSSLSGWLPSS 349
RTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAPFQDSSLSGWLPSS
Sbjct: 301 RTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAPFQDSSLSGWLPSS 349
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 64.3 bits (155), Expect = 2e-10
Identities = 82/306 (26%), Positives = 94/306 (30%), Gaps = 8/306 (2%)
Query: 37 PSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTL 96
PS T + P PS P S T + P PS T +
Sbjct: 4 PSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNT 63
Query: 97 PGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLP 156
P PS T SS P P I + S T S P PS T P
Sbjct: 64 PTLTPSSTPTLTPSSTPTLTPQPILT-----RSSTPTLTPSSPPTLTPSNTPTLTPSNTP 118
Query: 157 GWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPG 216
PS T ++ P PS T SS P S + SSR S P
Sbjct: 119 TLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP--SSRPI-LTRSSTPT 175
Query: 217 QHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDN 276
PS T S+ PS T SS P S T SS P S T +
Sbjct: 176 LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPS 235
Query: 277 TLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAP 336
+ P S T + P PS T SN P PS T + P PS
Sbjct: 236 SRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPT 295
Query: 337 FQDSSL 342
SSL
Sbjct: 296 LTPSSL 301
Score = 54.7 bits (130), Expect = 1e-07
Identities = 68/249 (27%), Positives = 76/249 (30%), Gaps = 16/249 (6%)
Query: 101 PSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLP 160
PS T SS P PS T S P S T + P P
Sbjct: 4 PSNTPTLTPSSPPTLTPSS-----------TPTLTPSSQPILTRSSTPTLTPSSPPTLTP 52
Query: 161 SRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPS 220
S T + P PS T SS P P I + S T S P PS
Sbjct: 53 SNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQPILT-----RSSTPTLTPSSPPTLTPS 107
Query: 221 RTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPG 280
T SN PS T SS P PS T SS P S T ++ P
Sbjct: 108 NTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPI 167
Query: 281 QHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAPFQDS 340
S T + P PS T S+ P PS + P PS S
Sbjct: 168 LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPS 227
Query: 341 SLSGWLPSS 349
S PSS
Sbjct: 228 STPTLTPSS 236
Score = 40.4 bits (93), Expect = 0.002
Identities = 62/244 (25%), Positives = 70/244 (28%), Gaps = 30/244 (12%)
Query: 19 LWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDD 78
L R T + P PS T P PS P PS T
Sbjct: 88 LTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPS 147
Query: 79 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGS 138
+ P S T ++ P S T SS P PS S
Sbjct: 148 SRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPS-------------------S 188
Query: 139 LPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASF 198
P PS T + P S T ++ P PS T SS P I +
Sbjct: 189 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRP------ILT- 241
Query: 199 QGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQ 258
S T S P PS T SN PS T SS P PS T
Sbjct: 242 ----RSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLT 297
Query: 259 HSSL 262
SSL
Sbjct: 298 PSSL 301
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 64.3 bits (155), Expect = 2e-10
Identities = 82/306 (26%), Positives = 94/306 (30%), Gaps = 8/306 (2%)
Query: 37 PSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTL 96
PS T + P PS P S T + P PS T +
Sbjct: 4 PSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNT 63
Query: 97 PGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLP 156
P PS T SS P P I + S T S P PS T P
Sbjct: 64 PTLTPSSTPTLTPSSTPTLTPQPILT-----RSSTPTLTPSSPPTLTPSNTPTLTPSNTP 118
Query: 157 GWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPG 216
PS T ++ P PS T SS P S + SSR S P
Sbjct: 119 TLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP--SSRPI-LTRSSTPT 175
Query: 217 QHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDN 276
PS T S+ PS T SS P S T SS P S T +
Sbjct: 176 LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPS 235
Query: 277 TLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAP 336
+ P S T + P PS T SN P PS T + P PS
Sbjct: 236 SRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPT 295
Query: 337 FQDSSL 342
SSL
Sbjct: 296 LTPSSL 301
Score = 54.7 bits (130), Expect = 1e-07
Identities = 68/249 (27%), Positives = 76/249 (30%), Gaps = 16/249 (6%)
Query: 101 PSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLP 160
PS T SS P PS T S P S T + P P
Sbjct: 4 PSNTPTLTPSSPPTLTPSS-----------TPTLTPSSQPILTRSSTPTLTPSSPPTLTP 52
Query: 161 SRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPS 220
S T + P PS T SS P P I + S T S P PS
Sbjct: 53 SNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQPILT-----RSSTPTLTPSSPPTLTPS 107
Query: 221 RTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPG 280
T SN PS T SS P PS T SS P S T ++ P
Sbjct: 108 NTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPI 167
Query: 281 QHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAPFQDS 340
S T + P PS T S+ P PS + P PS S
Sbjct: 168 LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPS 227
Query: 341 SLSGWLPSS 349
S PSS
Sbjct: 228 STPTLTPSS 236
Score = 40.4 bits (93), Expect = 0.002
Identities = 62/244 (25%), Positives = 70/244 (28%), Gaps = 30/244 (12%)
Query: 19 LWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDD 78
L R T + P PS T P PS P PS T
Sbjct: 88 LTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPS 147
Query: 79 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGS 138
+ P S T ++ P S T SS P PS S
Sbjct: 148 SRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPS-------------------S 188
Query: 139 LPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASF 198
P PS T + P S T ++ P PS T SS P I +
Sbjct: 189 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRP------ILT- 241
Query: 199 QGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQ 258
S T S P PS T SN PS T SS P PS T
Sbjct: 242 ----RSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLT 297
Query: 259 HSSL 262
SSL
Sbjct: 298 PSSL 301
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 58.5 bits (140), Expect = 8e-09
Identities = 71/269 (26%), Positives = 82/269 (30%), Gaps = 15/269 (5%)
Query: 84 LPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSR---TAPFQDGSLP 140
L R Q HP P + G S + G + R T S P
Sbjct: 2 LMEREMRTQSGEAAKEHPMAV-PGESGGRTGNWVSSVGEMTGPYGPREMGTPTLTPSSPP 60
Query: 141 GQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQG 200
PS T + P P T + P PS T SS P PS +
Sbjct: 61 TLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLT- 119
Query: 201 RHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHS 260
S T S P PS T S+ PS T SS P PS T S
Sbjct: 120 --PSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPS 177
Query: 261 SLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTP 320
S P S ++ P PS T P PS T SN P +PS T
Sbjct: 178 STPTLTPSSRPILTRSSTPTLTPSST--------PTLTPSSTPTLTPSNTPTLIPSSTPT 229
Query: 321 FQDGTLPGQHPSRMAPFQDSSLSGWLPSS 349
+ P PS SS PSS
Sbjct: 230 LTPSSTPTLTPSSRPTLTRSSTPTLTPSS 258
Score = 55.8 bits (133), Expect = 5e-08
Identities = 69/256 (26%), Positives = 81/256 (31%), Gaps = 17/256 (6%)
Query: 7 VGEQVQPRGLQELWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPG 66
VGE P G +E+ P TL PS T + P P P
Sbjct: 37 VGEMTGPYGPREMGTPTLTPSSPPTLT---PSNTPTLTPCSTPTLTPCST--------PT 85
Query: 67 RHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGR 126
PS T + P PS T ++ P PS T SS P PS +
Sbjct: 86 LTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLT-- 143
Query: 127 HSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSS 186
S T S P PS T + P PS T ++ P S T SS
Sbjct: 144 -RSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSS 202
Query: 187 FPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSL 246
P PS + S T S P PS T S+ S T SS
Sbjct: 203 TPTLTPSSTPTLT---PSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPSST 259
Query: 247 PRKHPSRTAPFQHSSL 262
P PS T SSL
Sbjct: 260 PTLTPSSTPTLTPSSL 275
>gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 279
Score = 54.3 bits (129), Expect = 2e-07
Identities = 59/205 (28%), Positives = 64/205 (31%), Gaps = 17/205 (8%)
Query: 132 APFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQH 191
AP L GQ P P PS P + P HPS P S P
Sbjct: 32 APVSGEGLLGQGAEGIGP---SIHPSIHPSTHPPIHPSIHPSIHPSIHPPVHPSIHPPTR 88
Query: 192 PSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNL----LGQHPSRTAPFQDSSLP 247
PS H S P + P HPS P S L HPS P P
Sbjct: 89 PSI-------HPSIHPPVHLSTHPSTHPSIHPPIHPSIYPSIHLSTHPSIHPPIHPFIHP 141
Query: 248 RKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQD 307
HP S+ P H T P T P HPS P HPS +P
Sbjct: 142 SIHPPTHPSIHASTHPLIHHPSTHP---PTHPSTHPSIHPTIHPRAHPPIHPSIHSPTHP 198
Query: 308 SNLPGRLPSRTTPFQDGTLPGQHPS 332
S P PS T P HP+
Sbjct: 199 SIHPSTHPSTHPLTHPSTYPSIHPT 223
Score = 53.5 bits (127), Expect = 3e-07
Identities = 65/248 (26%), Positives = 77/248 (31%), Gaps = 45/248 (18%)
Query: 9 EQVQPRGLQELWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRH 68
E +Q G +E WR AP + L G+ P P PS P I P H
Sbjct: 17 EALQSPGREE-WRAGPAPVSGEGLLGQGAEGIGP---SIHPSIHPSTHPPIHPSIHPSIH 72
Query: 69 PSRTAPFQDD----TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQ 124
PS P T P PS P +T P HPS P S +P H S
Sbjct: 73 PSIHPPVHPSIHPPTRPSIHPSIHPPVHLSTHPSTHPSIHPPIHPSIYPSIHLS------ 126
Query: 125 GRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQD 184
H S P P HP T P HPS P
Sbjct: 127 -THPSIHPPIHPFIHPSIHPPTHPSIHASTHP---------------LIHHPSTHPPTHP 170
Query: 185 SSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDS 244
S+ P HP+ + P HPS +P S HPS S
Sbjct: 171 STHPSIHPT---------------IHPRAHPPIHPSIHSPTHPSIHPSTHPSTHPLTHPS 215
Query: 245 SLPRKHPS 252
+ P HP+
Sbjct: 216 TYPSIHPT 223
Score = 45.8 bits (107), Expect = 6e-05
Identities = 50/195 (25%), Positives = 62/195 (31%), Gaps = 16/195 (8%)
Query: 8 GEQVQPRGLQELWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGR 67
GE + +G + + T P HPS P PS P + I P
Sbjct: 36 GEGLLGQGAEGIGPSIHPSIHPSTHPPIHPSIHPSIHPSIHPPVHPSIHPPTRPSIHPSI 95
Query: 68 HPSRTAPFQDDTLPGWLPSRTAPFQDNTLP----GRHPSGTAPFQDSSFPGQHPSRIASF 123
HP P T P PS P + P HPS P P HP S
Sbjct: 96 HP----PVHLSTHPSTHPSIHPPIHPSIYPSIHLSTHPSIHPPIHPFIHPSIHPPTHPSI 151
Query: 124 QGR-----HSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSG 178
H T P + P HPS P PS +P + P HPS
Sbjct: 152 HASTHPLIHHPSTHP---PTHPSTHPSIHPTIHPRAHPPIHPSIHSPTHPSIHPSTHPST 208
Query: 179 TAPFQDSSFPGQHPS 193
S++P HP+
Sbjct: 209 HPLTHPSTYPSIHPT 223
Score = 31.2 bits (69), Expect = 1.4
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 279 PGQHPSRTAPFQDDTLPGQHPSRTAPFQDS----NLPGRLPSRTTPFQDGTLPGQHPSRM 334
P HPS P P HPS P S P PS P T P HPS
Sbjct: 53 PSIHPSTHPPIHPSIHPSIHPSIHPPVHPSIHPPTRPSIHPSIHPPVHLSTHPSTHPSIH 112
Query: 335 APFQDS 340
P S
Sbjct: 113 PPIHPS 118
>gi|239753972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 298
Score = 52.4 bits (124), Expect = 6e-07
Identities = 68/242 (28%), Positives = 79/242 (32%), Gaps = 33/242 (13%)
Query: 95 TLPGRHPSGT-APFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDD 153
T P HPS T P S+ HPS H S P + P HPS P
Sbjct: 48 THPTIHPSSTHPPIHPSTHLPIHPSTHLPI---HPSTHPPIHPSTNPPIHPSTNPPIHPS 104
Query: 154 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQH------PSRIASFQGRHSSRTA 207
T P PS P +T HPS P H P+ HSS
Sbjct: 105 THPTIHPSTHPP---STYLPIHPSAHPLIHPFIHPLTHLFIHPPPTHSPIHPPTHSSIHL 161
Query: 208 PFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSR-------TAPFQHS 260
P P +PS P HPS P S+ P HPS T P H
Sbjct: 162 PTHLSIYPPTYPSIHPPPTP------HPSIHPPIHPSTHPLIHPSTHTSTHPPTHPPTHP 215
Query: 261 -SLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAP------FQDSNLPGR 313
S P H S P T P HP + T HP +P F+ +L R
Sbjct: 216 PSNPSIHSSIHPPIHPPTHPSTHPPIHSSTHPSTYFSTHPPLLSPKVLQKAFRPFSLSSR 275
Query: 314 LP 315
+P
Sbjct: 276 IP 277
Score = 50.4 bits (119), Expect = 2e-06
Identities = 61/229 (26%), Positives = 70/229 (30%), Gaps = 35/229 (15%)
Query: 31 TLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAP 90
T P HPS T P PS P HPS P T P PS P
Sbjct: 48 THPTIHPSSTHP-------PIHPSTHLPIHPSTHLPIHPSTHPPIHPSTNPPIHPSTNPP 100
Query: 91 FQDNTLPGRH-----PSGTAPFQDSSFPGQH--------------PSRIASFQGRHSSRT 131
+T P H PS P S+ P H P+ HSS
Sbjct: 101 IHPSTHPTIHPSTHPPSTYLPIHPSAHPLIHPFIHPLTHLFIHPPPTHSPIHPPTHSSIH 160
Query: 132 APFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQH 191
P P +PS P P PS P +T P HPS + P H
Sbjct: 161 LPTHLSIYPPTYPSIHPP------PTPHPSIHPPIHPSTHPLIHPSTHTSTHPPTHPPTH 214
Query: 192 PSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAP 240
P S HSS P + P HP + S HP +P
Sbjct: 215 PPSNPSI---HSSIHPPIHPPTHPSTHPPIHSSTHPSTYFSTHPPLLSP 260
Score = 41.2 bits (95), Expect = 0.001
Identities = 41/141 (29%), Positives = 45/141 (31%), Gaps = 20/141 (14%)
Query: 215 PGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQ 274
P HPS P S L HPS P S+ P HPS P S+ P H S P
Sbjct: 59 PPIHPSTHLPIHPSTHLPIHPSTHPPIHPSTNPPIHPSTNPPIHPSTHPTIHPSTHPPST 118
Query: 275 DNTL-PGQHP-------------SRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTP 320
+ P HP P P H S P S P PS P
Sbjct: 119 YLPIHPSAHPLIHPFIHPLTHLFIHPPPTHSPIHPPTHSSIHLPTHLSIYPPTYPSIHPP 178
Query: 321 FQDGTLPGQHPSRMAPFQDSS 341
P HPS P S+
Sbjct: 179 ------PTPHPSIHPPIHPST 193
Score = 37.4 bits (85), Expect = 0.020
Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 15/110 (13%)
Query: 242 QDSSLPRKHPSRTAPFQHSSLPGKHL--SRTAPFQD-------------NTLPGQHPSRT 286
++S L P+ P + S L G L SR + +D +T P HPS
Sbjct: 7 EESELTSPKPAYQIPGKSSLLTGAWLCLSRGSILKDVLNQPTHPTIHPSSTHPPIHPSTH 66
Query: 287 APFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAP 336
P T HPS P S P PS P T P HPS P
Sbjct: 67 LPIHPSTHLPIHPSTHPPIHPSTNPPIHPSTNPPIHPSTHPTIHPSTHPP 116
Score = 37.4 bits (85), Expect = 0.020
Identities = 23/70 (32%), Positives = 27/70 (38%)
Query: 235 PSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTL 294
P+ S+ P HPS P S+ H S P +T P HPS P T
Sbjct: 47 PTHPTIHPSSTHPPIHPSTHLPIHPSTHLPIHPSTHPPIHPSTNPPIHPSTNPPIHPSTH 106
Query: 295 PGQHPSRTAP 304
P HPS P
Sbjct: 107 PTIHPSTHPP 116
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 51.6 bits (122), Expect = 1e-06
Identities = 58/240 (24%), Positives = 89/240 (37%), Gaps = 31/240 (12%)
Query: 78 DTLPGWLPSRTAPFQDNTLPGRHPSG---TAPFQDSSFPGQHPSRIASFQGRHSSRTAPF 134
D LP P++T+ NT PG+ P G + P+ + S P PS + + P
Sbjct: 9 DALPEHSPAKTSAVS-NTKPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPA 67
Query: 135 QDGSLPGQHPSRTAPFQDDTLPGWLPSRT---APFQDNTLPGRHPSGTAPFQDSSFPG-- 189
G P P+ P P PS P+ T+PG P+G P + FP
Sbjct: 68 PTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELP 127
Query: 190 ------QHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQD 243
P+ S + P+ G + GQ+P+ P+ G +P+ P
Sbjct: 128 RPYGAPTDPAAAGPLGPWGSMSSGPWAPG-MGGQYPTPNMPYPSP---GPYPAPPPP--- 180
Query: 244 SSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNT----LPGQHPSRTAPFQDDTLPGQHP 299
+ P P ++P AP+ T PG +P+ + PFQ + P P
Sbjct: 181 -----QAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTPGLYPTPSNPFQVPSGPSGAP 235
Score = 43.9 bits (102), Expect = 2e-04
Identities = 51/202 (25%), Positives = 74/202 (36%), Gaps = 20/202 (9%)
Query: 33 PGRHPSRTAPFQDGTLPGQRPSRM--APFQNGILPGRHPSRTAPFQDDTLPGWLPSRT-- 88
P +PS + G P PS + P G+ P P+ P P PS
Sbjct: 39 PWNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPP 98
Query: 89 -APFQDNTLPGRHPSGTAPFQDSSFP--------GQHPSRIASFQGRHSSRTAPFQDGSL 139
P+ T+PG P+G P + FP P+ S + P+ G +
Sbjct: 99 GGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPG-M 157
Query: 140 PGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASF- 198
GQ+P+ P+ PG P+ P P P GT P P +P+ S+
Sbjct: 158 GGQYPTPNMPYPS---PGPYPAPPPPQAPGAAP-PVPWGTVPPGAWGPPAPYPAPTGSYP 213
Query: 199 -QGRHSSRTAPFQDGSLPGQHP 219
G + + + PFQ S P P
Sbjct: 214 TPGLYPTPSNPFQVPSGPSGAP 235
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 51.2 bits (121), Expect = 1e-06
Identities = 59/206 (28%), Positives = 67/206 (32%), Gaps = 18/206 (8%)
Query: 97 PGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLP 156
P HPS P S P HP S P + P HP P
Sbjct: 32 PSIHPSIHPPTHPSIHPSIHPPTHPSIHTH-----PPIHPHTHPPIHPPTHPSIHPLIHP 86
Query: 157 GWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQ-GRHSSRTAPFQDGSLP 215
PS P + P HP + S P HP S HSS P
Sbjct: 87 SIHPSLHPPTHSSIHPSTHPPTHSSIHPSIHPSTHPLIHPSIHPSTHSSIHPPTHS---- 142
Query: 216 GQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLP-GKHLSRTAPFQ 274
HPS T P ++ HP +P S P HP T P HSS+ H S P
Sbjct: 143 --HPS-THPLIHPSI---HPPTHSPIHPSIHPPTHPP-THPSIHSSIHLPTHSSIHPPTH 195
Query: 275 DNTLPGQHPSRTAPFQDDTLPGQHPS 300
P HP +P T P HPS
Sbjct: 196 SFIHPSIHPPTHSPIHPLTHPFIHPS 221
Score = 35.8 bits (81), Expect = 0.059
Identities = 44/171 (25%), Positives = 54/171 (31%), Gaps = 15/171 (8%)
Query: 26 PFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLP 85
P T P HP P PS P + I P HP P P P
Sbjct: 63 PIHPHTHPPIHPPTHPSIHPLIHPSIHPSLHPPTHSSIHPSTHP----PTHSSIHPSIHP 118
Query: 86 SRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPS 145
S + P H S P S P HP S H +P P HP
Sbjct: 119 STHPLIHPSIHPSTHSSIHPP--THSHPSTHPLIHPSI---HPPTHSPIHPSIHPPTHPP 173
Query: 146 RTAPFQDDTLPGWLPSRTA---PFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
T P ++ LP+ ++ P P HP +P + P HPS
Sbjct: 174 -THPSIHSSI--HLPTHSSIHPPTHSFIHPSIHPPTHSPIHPLTHPFIHPS 221
Score = 35.0 bits (79), Expect = 0.100
Identities = 54/190 (28%), Positives = 57/190 (30%), Gaps = 28/190 (14%)
Query: 31 TLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAP 90
T P HP P T P P I P HPS P P P P
Sbjct: 60 THPPIHPHTHPPIHPPTHPSIHPL--------IHPSIHPSLHPPTHSSIHPSTHP----P 107
Query: 91 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPF 150
+ P HPS T P P HPS HSS P S P HP
Sbjct: 108 THSSIHPSIHPS-THPL---IHPSIHPS-------THSSIHPPTH--SHPSTHPLIHPSI 154
Query: 151 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQ 210
T PS P T P H S P S P H S H +P
Sbjct: 155 HPPTHSPIHPSIHPPTHPPTHPSIHSSIHLPTHSSIHPPTHSFIHPSI---HPPTHSPIH 211
Query: 211 DGSLPGQHPS 220
+ P HPS
Sbjct: 212 PLTHPFIHPS 221
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/122 (27%), Positives = 39/122 (31%), Gaps = 16/122 (13%)
Query: 213 SLPGQ---HPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSR 269
S PG+ HP P ++ HPS P S P HP T P H+
Sbjct: 14 SPPGKICIHPPLHPPTHSPSI---HPSIHPPTHPSIHPSIHPP-THPSIHTH-------- 61
Query: 270 TAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQ 329
P +T P HP P HPS P S P P + P
Sbjct: 62 -PPIHPHTHPPIHPPTHPSIHPLIHPSIHPSLHPPTHSSIHPSTHPPTHSSIHPSIHPST 120
Query: 330 HP 331
HP
Sbjct: 121 HP 122
>gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo
sapiens]
Length = 475
Score = 49.7 bits (117), Expect = 4e-06
Identities = 67/240 (27%), Positives = 74/240 (30%), Gaps = 40/240 (16%)
Query: 66 GRHPSRTAPFQDDTLPGWLPSRTA-----PFQDNTLPGRHPSGTAPFQDSSFPGQHPSRI 120
G H ++ FQ G ++ A P + P HPS P S+ P H
Sbjct: 42 GTHGPHSSGFQPHNRSGLRVNKGAASIHPPIHLHIHPPIHPSIHPPMHSSTHPSIH---- 97
Query: 121 ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTA 180
F HSS P HPS T P PS P HP
Sbjct: 98 -LFIHIHSSTHPSIHPFIHPSVHPSNHPSVHPSTHPSTHPS--------IHPFIHPPVHP 148
Query: 181 PFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAP 240
P P HPS S T P P HPS P S L HPS P
Sbjct: 149 PIHLHIHPPIHPSVHPS--------THPLIH---PPIHPSIHPPIHPSTHLSTHPSIRPP 197
Query: 241 FQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPS 300
S+ P HP P P H S P P HPS T P HPS
Sbjct: 198 VHPSTHPSTHPLIHPPIHPPIHPSIHPSTHPPTHP---PVPHPS--------THPSIHPS 246
Score = 45.4 bits (106), Expect = 7e-05
Identities = 57/210 (27%), Positives = 66/210 (31%), Gaps = 36/210 (17%)
Query: 141 GQHPSRTAPFQDDTLPGWLPSRTA-----PFQDNTLPGRHPSGTAPFQDSSFPGQHPSRI 195
G H ++ FQ G ++ A P + P HPS P S+ P H
Sbjct: 42 GTHGPHSSGFQPHNRSGLRVNKGAASIHPPIHLHIHPPIHPSIHPPMHSSTHPSIH---- 97
Query: 196 ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTA 255
F HSS P HPS HPS S+ P HPS
Sbjct: 98 -LFIHIHSSTHPSIHPFIHPSVHPSN------------HPS----VHPSTHPSTHPS-IH 139
Query: 256 PFQHSSL-PGKHLSRTAPFQDNTLPGQHP--------SRTAPFQDDTLPGQHPSRTAPFQ 306
PF H + P HL P + P HP S P T HPS P
Sbjct: 140 PFIHPPVHPPIHLHIHPPIHPSVHPSTHPLIHPPIHPSIHPPIHPSTHLSTHPSIRPPVH 199
Query: 307 DSNLPGRLPSRTTPFQDGTLPGQHPSRMAP 336
S P P P P HPS P
Sbjct: 200 PSTHPSTHPLIHPPIHPPIHPSIHPSTHPP 229
Score = 41.6 bits (96), Expect = 0.001
Identities = 60/201 (29%), Positives = 67/201 (33%), Gaps = 36/201 (17%)
Query: 140 PGQHPSRTAPFQDDTLPG-----WLPSRTAPFQDNTL-PGRHPSGTAPFQDSSFPGQHPS 193
P HPS P T P + S T P + P HPS S+ P HPS
Sbjct: 78 PPIHPSIHPPMHSSTHPSIHLFIHIHSSTHPSIHPFIHPSVHPSNHPSVHPSTHPSTHPS 137
Query: 194 RIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSR 253
I F H P P HPS HPS T P P HPS
Sbjct: 138 -IHPFI--HPPVHPPIHLHIHPPIHPS------------VHPS-THPLIH---PPIHPSI 178
Query: 254 TAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGR 313
P S+ H S P +T P HP P P HPS P ++ P
Sbjct: 179 HPPIHPSTHLSTHPSIRPPVHPSTHPSTHPLIHPPIHPPIHPSIHPSTHPP---THPPVP 235
Query: 314 LPSRTTPFQDGTLPGQHPSRM 334
PS T P HPS M
Sbjct: 236 HPS--------THPSIHPSYM 248
Score = 38.1 bits (87), Expect = 0.012
Identities = 64/252 (25%), Positives = 75/252 (29%), Gaps = 42/252 (16%)
Query: 33 PGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQ 92
P HPS T P PS + P H P P P P
Sbjct: 116 PSVHPSNHPSVHPSTHPSTHPSIHPFIHPPVHPPIHLHIHPPIHPSVHPSTHPLIHPPIH 175
Query: 93 DNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQD 152
+ P HPS S P HPS + P HP P
Sbjct: 176 PSIHPPIHPSTHLSTHPSIRPPVHPS-------------------THPSTHPLIHPPIHP 216
Query: 153 DTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDG 212
P PS T P HP P S+ P HPS + + S R+ F
Sbjct: 217 PIHPSIHPS--------THPPTHPPVPHP---STHPSIHPSYMGCIEVLRSMRSLDFNTR 265
Query: 213 --------SLPGQHPSR-TAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLP 263
SLP S TAP D + Q +R P + L AP S P
Sbjct: 266 TQVTRDACSLPWDVGSTGTAPPGDGYV--QADARGPPDHEEHLYVNTQGLDAPEPEDS-P 322
Query: 264 GKHLSRTAPFQD 275
K L PF+D
Sbjct: 323 KKDLFDMRPFED 334
Score = 33.1 bits (74), Expect = 0.38
Identities = 31/110 (28%), Positives = 36/110 (32%), Gaps = 5/110 (4%)
Query: 26 PFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLP 85
P P HP P P PS I P HPS T P T P P
Sbjct: 157 PIHPSVHPSTHPLIHPPIHPSIHPPIHPSTHLSTHPSIRPPVHPS-THP---STHPLIHP 212
Query: 86 SRTAPFQDNTLPGRHPSGTAPF-QDSSFPGQHPSRIASFQGRHSSRTAPF 134
P + P HP P S+ P HPS + + S R+ F
Sbjct: 213 PIHPPIHPSIHPSTHPPTHPPVPHPSTHPSIHPSYMGCIEVLRSMRSLDF 262
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.4 bits (111), Expect = 2e-05
Identities = 85/319 (26%), Positives = 109/319 (34%), Gaps = 34/319 (10%)
Query: 10 QVQPRGLQELWRRWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHP 69
Q +P+GLQ L P + D P P ++P + S+ P LP
Sbjct: 271 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP----TLPATPH 326
Query: 70 SRTAPFQDDT-LPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHS 128
S + Q T LP PS +AP TLP P T P Q ++ G + Q HS
Sbjct: 327 SSSLTCQLATPLPLAPPSPSAPPSLQTLPS--PPATPPSQATTSLGS-----PTLQATHS 379
Query: 129 SRTAPFQD--GSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSS 186
+P + P Q P A LP AP P P T Q +
Sbjct: 380 FLPSPPLSPLATPPPQAPPALA----------LPPLQAPPSPPASPPLSPLATPSPQAPN 429
Query: 187 FPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSL 246
H + APF + P PS T P Q L P + P +S
Sbjct: 430 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS- 488
Query: 247 PRKHPSRTAPFQHS---SLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTA 303
P PS T P Q + P L++ P L P + P + PGQ A
Sbjct: 489 PPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL-ATPPLQALPSPPASFPGQ-----A 542
Query: 304 PFQDSNLPGRLPSRTTPFQ 322
PF S P T P Q
Sbjct: 543 PFSPSASLPMSPLATPPPQ 561
Score = 32.7 bits (73), Expect = 0.50
Identities = 74/295 (25%), Positives = 100/295 (33%), Gaps = 56/295 (18%)
Query: 49 PGQRPSRMAPFQNGILPG-RHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPF 107
P P+R P G HPS+ P L P + P + + P P ++P
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPKP---KGLQALRPPQVTPPRKDAAPALGPLSSSPL 304
Query: 108 QDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDT-LPGWLPSRTAPF 166
PS A+ Q S+ P +LP S + Q T LP PS +AP
Sbjct: 305 AT-------PSPSAALQ----SQAPP----TLPATPHSSSLTCQLATPLPLAPPSPSAPP 349
Query: 167 QDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQ 226
TLP P T P Q ++ G + Q HS +P P T P Q
Sbjct: 350 SLQTLPS--PPATPPSQATTSLGS-----PTLQATHSFLPSP-------PLSPLATPPPQ 395
Query: 227 DSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRT 286
L P + P +S P + +P ++L HL +
Sbjct: 396 APPALALPPLQAPPSPPASPPLSPLATPSPQAPNAL-AVHLLQ----------------- 437
Query: 287 APFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAPFQDSS 341
APF P P APF P PS T P Q P ++ P +S
Sbjct: 438 APFS----PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS 488
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 46.6 bits (109), Expect = 3e-05
Identities = 59/305 (19%), Positives = 110/305 (36%), Gaps = 10/305 (3%)
Query: 40 TAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGR 99
T P + + P+ P + + P+ T T P P+ T P + +
Sbjct: 257 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE-PAPTTPKKPAPTTPK 315
Query: 100 HPSGTAPFQDSSFPGQHPSRI----ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTL 155
P+ T P + + + P+ A + + TAP + + P+ T P +
Sbjct: 316 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 375
Query: 156 PGWLPSRTAPFQDN-TLPGRHPSGT---APFQDSSFPGQHPSRIASFQGRHSSRTAPFQD 211
PS T P + T P+ T AP S P P + + + T P +
Sbjct: 376 TTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKEPSPTTTKEPAPTTPKEP 434
Query: 212 GSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTA 271
+ P+ T P + + + P+ T + + K P+ T P + + K L+ T
Sbjct: 435 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 494
Query: 272 PFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHP 331
P + + P+ T P + + P+ T P + + + + TP + + P
Sbjct: 495 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 554
Query: 332 SRMAP 336
+ P
Sbjct: 555 APTTP 559
Score = 39.3 bits (90), Expect = 0.005
Identities = 51/258 (19%), Positives = 89/258 (34%), Gaps = 16/258 (6%)
Query: 35 RHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQD-DTLPGWLPSRT---AP 90
+ P+ TAP + + P+ P + + PS T P + T P+ T AP
Sbjct: 346 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 405
Query: 91 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPF 150
+ P T P + S + P A + + T P + + P+ T P
Sbjct: 406 TTTKSAP------TTPKEPSPTTTKEP---APTTPKEPAPTTPKKPAPTTPKEPAPTTPK 456
Query: 151 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQ 210
+ P+ T P + P TAP P ++A + T P +
Sbjct: 457 EPAPTTTKKPAPTTPKEPAPTT---PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 513
Query: 211 DGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRT 270
+ P+ T P + + + + P + + K P+ T P + + K + T
Sbjct: 514 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 573
Query: 271 APFQDNTLPGQHPSRTAP 288
P + P+ T P
Sbjct: 574 TPKGTAPTTLKEPAPTTP 591
Score = 38.1 bits (87), Expect = 0.012
Identities = 55/302 (18%), Positives = 108/302 (35%), Gaps = 11/302 (3%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGW 83
T P + + P+ T P + + P+ P + + P+ T P +
Sbjct: 296 TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTT-KEPAPTTPKEPAPTAPK 354
Query: 84 LPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRT-APFQDGSLPG- 141
P+ T P + + P+ T + S + P+ + +++ AP S P
Sbjct: 355 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 414
Query: 142 -QHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQG 200
+ PS T + P+ T P + + P+ T P + + + P+ +
Sbjct: 415 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 474
Query: 201 RHSS--RTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQ 258
++ TAP L P + AP + P+ T P + + + P+ T P +
Sbjct: 475 APTTPKETAPTTPKKLTPTTPEKLAPTTP-----EKPAPTTPEELAPTTPEEPTPTTPEE 529
Query: 259 HSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRT 318
+ K + P + + P+ T P + + + T P + + P+ T
Sbjct: 530 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 589
Query: 319 TP 320
TP
Sbjct: 590 TP 591
Score = 36.6 bits (83), Expect = 0.034
Identities = 62/312 (19%), Positives = 96/312 (30%), Gaps = 20/312 (6%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRT-----APFQDD 78
T P + + P+ T P + ++P+ P + + P+ T AP
Sbjct: 413 TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPK 472
Query: 79 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDG- 137
P TAP L P AP P +A + T P +
Sbjct: 473 EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAP 532
Query: 138 ----SLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
+ P AP P AP P GTAP P
Sbjct: 533 TTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK 592
Query: 194 RIASFQGRHSSRTAPFQ---DGSLPGQHPSRTAPF---QDSNLLGQHPSRTAPFQDSSLP 247
+ A + ++ P D P P TAP + + + P+ T P +
Sbjct: 593 KPAPKELAPTTTKEPTSTTCDKPAPTT-PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 651
Query: 248 RKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQD 307
K P+ T P + + K L+ T + P+ T P + + P+ T P +
Sbjct: 652 LKEPAPTTPKKPAP---KELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 708
Query: 308 SNLPGRLPSRTT 319
+ P TT
Sbjct: 709 APTTPETPPPTT 720
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 46.6 bits (109), Expect = 3e-05
Identities = 59/305 (19%), Positives = 110/305 (36%), Gaps = 10/305 (3%)
Query: 40 TAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGR 99
T P + + P+ P + + P+ T T P P+ T P + +
Sbjct: 298 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE-PAPTTPKKPAPTTPK 356
Query: 100 HPSGTAPFQDSSFPGQHPSRI----ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTL 155
P+ T P + + + P+ A + + TAP + + P+ T P +
Sbjct: 357 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 416
Query: 156 PGWLPSRTAPFQDN-TLPGRHPSGT---APFQDSSFPGQHPSRIASFQGRHSSRTAPFQD 211
PS T P + T P+ T AP S P P + + + T P +
Sbjct: 417 TTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKEPSPTTTKEPAPTTPKEP 475
Query: 212 GSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTA 271
+ P+ T P + + + P+ T + + K P+ T P + + K L+ T
Sbjct: 476 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 535
Query: 272 PFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHP 331
P + + P+ T P + + P+ T P + + + + TP + + P
Sbjct: 536 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 595
Query: 332 SRMAP 336
+ P
Sbjct: 596 APTTP 600
Score = 39.3 bits (90), Expect = 0.005
Identities = 51/258 (19%), Positives = 89/258 (34%), Gaps = 16/258 (6%)
Query: 35 RHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQD-DTLPGWLPSRT---AP 90
+ P+ TAP + + P+ P + + PS T P + T P+ T AP
Sbjct: 387 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 446
Query: 91 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPF 150
+ P T P + S + P A + + T P + + P+ T P
Sbjct: 447 TTTKSAP------TTPKEPSPTTTKEP---APTTPKEPAPTTPKKPAPTTPKEPAPTTPK 497
Query: 151 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQ 210
+ P+ T P + P TAP P ++A + T P +
Sbjct: 498 EPAPTTTKKPAPTTPKEPAPTT---PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 554
Query: 211 DGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRT 270
+ P+ T P + + + + P + + K P+ T P + + K + T
Sbjct: 555 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 614
Query: 271 APFQDNTLPGQHPSRTAP 288
P + P+ T P
Sbjct: 615 TPKGTAPTTLKEPAPTTP 632
Score = 38.1 bits (87), Expect = 0.012
Identities = 55/302 (18%), Positives = 108/302 (35%), Gaps = 11/302 (3%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGW 83
T P + + P+ T P + + P+ P + + P+ T P +
Sbjct: 337 TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTT-KEPAPTTPKEPAPTAPK 395
Query: 84 LPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRT-APFQDGSLPG- 141
P+ T P + + P+ T + S + P+ + +++ AP S P
Sbjct: 396 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 455
Query: 142 -QHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQG 200
+ PS T + P+ T P + + P+ T P + + + P+ +
Sbjct: 456 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 515
Query: 201 RHSS--RTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQ 258
++ TAP L P + AP + P+ T P + + + P+ T P +
Sbjct: 516 APTTPKETAPTTPKKLTPTTPEKLAPTTP-----EKPAPTTPEELAPTTPEEPTPTTPEE 570
Query: 259 HSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRT 318
+ K + P + + P+ T P + + + T P + + P+ T
Sbjct: 571 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 630
Query: 319 TP 320
TP
Sbjct: 631 TP 632
Score = 36.6 bits (83), Expect = 0.034
Identities = 62/312 (19%), Positives = 96/312 (30%), Gaps = 20/312 (6%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRT-----APFQDD 78
T P + + P+ T P + ++P+ P + + P+ T AP
Sbjct: 454 TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPK 513
Query: 79 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDG- 137
P TAP L P AP P +A + T P +
Sbjct: 514 EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAP 573
Query: 138 ----SLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
+ P AP P AP P GTAP P
Sbjct: 574 TTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK 633
Query: 194 RIASFQGRHSSRTAPFQ---DGSLPGQHPSRTAPF---QDSNLLGQHPSRTAPFQDSSLP 247
+ A + ++ P D P P TAP + + + P+ T P +
Sbjct: 634 KPAPKELAPTTTKEPTSTTCDKPAPTT-PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 692
Query: 248 RKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQD 307
K P+ T P + + K L+ T + P+ T P + + P+ T P +
Sbjct: 693 LKEPAPTTPKKPAP---KELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 749
Query: 308 SNLPGRLPSRTT 319
+ P TT
Sbjct: 750 APTTPETPPPTT 761
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 46.6 bits (109), Expect = 3e-05
Identities = 59/305 (19%), Positives = 110/305 (36%), Gaps = 10/305 (3%)
Query: 40 TAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGR 99
T P + + P+ P + + P+ T T P P+ T P + +
Sbjct: 350 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE-PAPTTPKKPAPTTPK 408
Query: 100 HPSGTAPFQDSSFPGQHPSRI----ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTL 155
P+ T P + + + P+ A + + TAP + + P+ T P +
Sbjct: 409 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 468
Query: 156 PGWLPSRTAPFQDN-TLPGRHPSGT---APFQDSSFPGQHPSRIASFQGRHSSRTAPFQD 211
PS T P + T P+ T AP S P P + + + T P +
Sbjct: 469 TTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKEPSPTTTKEPAPTTPKEP 527
Query: 212 GSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTA 271
+ P+ T P + + + P+ T + + K P+ T P + + K L+ T
Sbjct: 528 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 587
Query: 272 PFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHP 331
P + + P+ T P + + P+ T P + + + + TP + + P
Sbjct: 588 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 647
Query: 332 SRMAP 336
+ P
Sbjct: 648 APTTP 652
Score = 39.3 bits (90), Expect = 0.005
Identities = 51/258 (19%), Positives = 89/258 (34%), Gaps = 16/258 (6%)
Query: 35 RHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQD-DTLPGWLPSRT---AP 90
+ P+ TAP + + P+ P + + PS T P + T P+ T AP
Sbjct: 439 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 498
Query: 91 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPF 150
+ P T P + S + P A + + T P + + P+ T P
Sbjct: 499 TTTKSAP------TTPKEPSPTTTKEP---APTTPKEPAPTTPKKPAPTTPKEPAPTTPK 549
Query: 151 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQ 210
+ P+ T P + P TAP P ++A + T P +
Sbjct: 550 EPAPTTTKKPAPTTPKEPAPTT---PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 606
Query: 211 DGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRT 270
+ P+ T P + + + + P + + K P+ T P + + K + T
Sbjct: 607 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 666
Query: 271 APFQDNTLPGQHPSRTAP 288
P + P+ T P
Sbjct: 667 TPKGTAPTTLKEPAPTTP 684
Score = 38.1 bits (87), Expect = 0.012
Identities = 55/302 (18%), Positives = 108/302 (35%), Gaps = 11/302 (3%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGW 83
T P + + P+ T P + + P+ P + + P+ T P +
Sbjct: 389 TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTT-KEPAPTTPKEPAPTAPK 447
Query: 84 LPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRT-APFQDGSLPG- 141
P+ T P + + P+ T + S + P+ + +++ AP S P
Sbjct: 448 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 507
Query: 142 -QHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQG 200
+ PS T + P+ T P + + P+ T P + + + P+ +
Sbjct: 508 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 567
Query: 201 RHSS--RTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQ 258
++ TAP L P + AP + P+ T P + + + P+ T P +
Sbjct: 568 APTTPKETAPTTPKKLTPTTPEKLAPTTP-----EKPAPTTPEELAPTTPEEPTPTTPEE 622
Query: 259 HSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRT 318
+ K + P + + P+ T P + + + T P + + P+ T
Sbjct: 623 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 682
Query: 319 TP 320
TP
Sbjct: 683 TP 684
Score = 36.6 bits (83), Expect = 0.034
Identities = 62/312 (19%), Positives = 96/312 (30%), Gaps = 20/312 (6%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRT-----APFQDD 78
T P + + P+ T P + ++P+ P + + P+ T AP
Sbjct: 506 TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPK 565
Query: 79 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDG- 137
P TAP L P AP P +A + T P +
Sbjct: 566 EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAP 625
Query: 138 ----SLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
+ P AP P AP P GTAP P
Sbjct: 626 TTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK 685
Query: 194 RIASFQGRHSSRTAPFQ---DGSLPGQHPSRTAPF---QDSNLLGQHPSRTAPFQDSSLP 247
+ A + ++ P D P P TAP + + + P+ T P +
Sbjct: 686 KPAPKELAPTTTKEPTSTTCDKPAPTT-PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 744
Query: 248 RKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQD 307
K P+ T P + + K L+ T + P+ T P + + P+ T P +
Sbjct: 745 LKEPAPTTPKKPAP---KELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 801
Query: 308 SNLPGRLPSRTT 319
+ P TT
Sbjct: 802 APTTPETPPPTT 813
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 46.6 bits (109), Expect = 3e-05
Identities = 59/305 (19%), Positives = 110/305 (36%), Gaps = 10/305 (3%)
Query: 40 TAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGR 99
T P + + P+ P + + P+ T T P P+ T P + +
Sbjct: 391 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE-PAPTTPKKPAPTTPK 449
Query: 100 HPSGTAPFQDSSFPGQHPSRI----ASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTL 155
P+ T P + + + P+ A + + TAP + + P+ T P +
Sbjct: 450 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 509
Query: 156 PGWLPSRTAPFQDN-TLPGRHPSGT---APFQDSSFPGQHPSRIASFQGRHSSRTAPFQD 211
PS T P + T P+ T AP S P P + + + T P +
Sbjct: 510 TTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKEPSPTTTKEPAPTTPKEP 568
Query: 212 GSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTA 271
+ P+ T P + + + P+ T + + K P+ T P + + K L+ T
Sbjct: 569 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 628
Query: 272 PFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHP 331
P + + P+ T P + + P+ T P + + + + TP + + P
Sbjct: 629 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 688
Query: 332 SRMAP 336
+ P
Sbjct: 689 APTTP 693
Score = 39.3 bits (90), Expect = 0.005
Identities = 51/258 (19%), Positives = 89/258 (34%), Gaps = 16/258 (6%)
Query: 35 RHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQD-DTLPGWLPSRT---AP 90
+ P+ TAP + + P+ P + + PS T P + T P+ T AP
Sbjct: 480 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 539
Query: 91 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPF 150
+ P T P + S + P A + + T P + + P+ T P
Sbjct: 540 TTTKSAP------TTPKEPSPTTTKEP---APTTPKEPAPTTPKKPAPTTPKEPAPTTPK 590
Query: 151 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQ 210
+ P+ T P + P TAP P ++A + T P +
Sbjct: 591 EPAPTTTKKPAPTTPKEPAPTT---PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 647
Query: 211 DGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRT 270
+ P+ T P + + + + P + + K P+ T P + + K + T
Sbjct: 648 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 707
Query: 271 APFQDNTLPGQHPSRTAP 288
P + P+ T P
Sbjct: 708 TPKGTAPTTLKEPAPTTP 725
Score = 38.1 bits (87), Expect = 0.012
Identities = 55/302 (18%), Positives = 108/302 (35%), Gaps = 11/302 (3%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGW 83
T P + + P+ T P + + P+ P + + P+ T P +
Sbjct: 430 TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTT-KEPAPTTPKEPAPTAPK 488
Query: 84 LPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRT-APFQDGSLPG- 141
P+ T P + + P+ T + S + P+ + +++ AP S P
Sbjct: 489 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 548
Query: 142 -QHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQG 200
+ PS T + P+ T P + + P+ T P + + + P+ +
Sbjct: 549 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 608
Query: 201 RHSS--RTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQ 258
++ TAP L P + AP + P+ T P + + + P+ T P +
Sbjct: 609 APTTPKETAPTTPKKLTPTTPEKLAPTTP-----EKPAPTTPEELAPTTPEEPTPTTPEE 663
Query: 259 HSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRT 318
+ K + P + + P+ T P + + + T P + + P+ T
Sbjct: 664 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 723
Query: 319 TP 320
TP
Sbjct: 724 TP 725
Score = 36.6 bits (83), Expect = 0.034
Identities = 62/312 (19%), Positives = 96/312 (30%), Gaps = 20/312 (6%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRT-----APFQDD 78
T P + + P+ T P + ++P+ P + + P+ T AP
Sbjct: 547 TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPK 606
Query: 79 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDG- 137
P TAP L P AP P +A + T P +
Sbjct: 607 EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAP 666
Query: 138 ----SLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
+ P AP P AP P GTAP P
Sbjct: 667 TTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK 726
Query: 194 RIASFQGRHSSRTAPFQ---DGSLPGQHPSRTAPF---QDSNLLGQHPSRTAPFQDSSLP 247
+ A + ++ P D P P TAP + + + P+ T P +
Sbjct: 727 KPAPKELAPTTTKEPTSTTCDKPAPTT-PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 785
Query: 248 RKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQD 307
K P+ T P + + K L+ T + P+ T P + + P+ T P +
Sbjct: 786 LKEPAPTTPKKPAP---KELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 842
Query: 308 SNLPGRLPSRTT 319
+ P TT
Sbjct: 843 APTTPETPPPTT 854
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 46.2 bits (108), Expect = 4e-05
Identities = 77/292 (26%), Positives = 100/292 (34%), Gaps = 33/292 (11%)
Query: 36 HPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNT 95
HPS+ P L RP ++ P + P P ++P + P PS +AP T
Sbjct: 259 HPSQPKP---KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS-PSAPPSPSAPPSLQT 314
Query: 96 LPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQD--GSLPGQHPSRTAPFQDD 153
LP P T P Q ++ G + Q HS +P + P Q P A
Sbjct: 315 LPS--PPATPPSQATTSLGS-----PTLQATHSFLPSPPLSPLATPPPQAPPALA----- 362
Query: 154 TLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGS 213
LP AP P P T Q + H + APF +
Sbjct: 363 -----LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 417
Query: 214 LPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHS---SLPGKHLSRT 270
P PS T P Q L P + P +S P PS T P Q + P L++
Sbjct: 418 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS-PPMSPSATPPPQAPPPLAAPPLQLAKP 476
Query: 271 APFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQ 322
P L P + P + PGQ APF S P T P Q
Sbjct: 477 PPQAPPAL-ATPPLQALPSPPASFPGQ-----APFSPSASLPMSPLATPPPQ 522
Score = 32.3 bits (72), Expect = 0.65
Identities = 54/209 (25%), Positives = 69/209 (33%), Gaps = 28/209 (13%)
Query: 143 HPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRH 202
HPS+ P L P + P + + P P ++P S P PS
Sbjct: 259 HPSQPKP---KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS-PSAPPSP-------- 306
Query: 203 SSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHS-- 260
+AP +LP P T P Q + LG P+ A P P T P Q
Sbjct: 307 ---SAPPSLQTLPS--PPATPPSQATTSLGS-PTLQATHSFLPSPPLSPLATPPPQAPPA 360
Query: 261 -SLPGKHLSRTAPFQDNTLPGQHPSRTAP-------FQDDTLPGQHPSRTAPFQDSNLPG 312
+LP + P P PS AP Q P P APF P
Sbjct: 361 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 420
Query: 313 RLPSRTTPFQDGTLPGQHPSRMAPFQDSS 341
PS T P Q P ++ P +S
Sbjct: 421 VSPSATPPSQAPPSLAAPPLQVPPSPPAS 449
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 45.8 bits (107), Expect = 6e-05
Identities = 64/304 (21%), Positives = 89/304 (29%), Gaps = 26/304 (8%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGW 83
T P T P P+ T T P P P + + P T P
Sbjct: 1397 TTPSPPTTTPSPPPTSTTTLPPTTTPSP------PTTTTTTPPPTTTPSPPITTTTTPPP 1450
Query: 84 LPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQH 143
+ + P T P + + P S P PS + T P + P
Sbjct: 1451 TTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1510
Query: 144 PSRTAPFQDDTLPG-------WLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIA 196
P+ T T P P T P T P P+ T ++ P P+
Sbjct: 1511 PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT--- 1567
Query: 197 SFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAP 256
++ T P P P+ T P + P T P ++ P T P
Sbjct: 1568 ------TTTTPPPTTTPSP---PTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTP 1618
Query: 257 FQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPS 316
++ P + T T P P+ T T P P+ T P P
Sbjct: 1619 SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSP-PTTTTPSPPITTTTTPPP 1677
Query: 317 RTTP 320
TTP
Sbjct: 1678 TTTP 1681
Score = 42.4 bits (98), Expect = 6e-04
Identities = 60/264 (22%), Positives = 75/264 (28%), Gaps = 12/264 (4%)
Query: 69 PSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSF-----PGQHPSRIASF 123
P T P T LP T P T P T P + P PS S
Sbjct: 1401 PPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPIST 1460
Query: 124 QGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQ 183
T P + P P T P T P T P T P P+ T
Sbjct: 1461 TTTPPPTTTPSPPTTTPS--PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLP 1518
Query: 184 DSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQD 243
P PS + T P + P P+ T + P+ T
Sbjct: 1519 ----PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1574
Query: 244 SSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTA 303
++ P P+ T P + T P T P T P T P P+ T
Sbjct: 1575 TTTPSP-PTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTT 1633
Query: 304 PFQDSNLPGRLPSRTTPFQDGTLP 327
+ P P+ TT T P
Sbjct: 1634 TLPPTTTPSPPPTTTTTPPPTTTP 1657
Score = 40.4 bits (93), Expect = 0.002
Identities = 67/317 (21%), Positives = 93/317 (29%), Gaps = 21/317 (6%)
Query: 26 PFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLP 85
P T P + + P T P + P P P T P T P P
Sbjct: 1425 PTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTP---PPTTTPSPPTTTPS--P 1479
Query: 86 SRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPS 145
T P T P T P ++ P P+ + T P + P
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLP----PTTTPSPPTTTTTTPPP 1535
Query: 146 RTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQH----PSRIASFQGR 201
T P T P P+ T T P P+ T ++ P PS
Sbjct: 1536 TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTT 1595
Query: 202 HSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSS 261
T P + P T P + P+ T ++ P P+ T ++
Sbjct: 1596 PPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT 1655
Query: 262 LPGKHLSRTA--PFQDNTLPGQHPSRTAPFQDDTLPGQHPSRT--APFQDSNLPGRLPSR 317
P + T P T P P T P T P+ T P + + +
Sbjct: 1656 TPSPPTTTTPSPPITTTTTP---PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTT 1712
Query: 318 TTPFQDGTLPGQHPSRM 334
TTP T P P+ M
Sbjct: 1713 TTP-SSTTTPSPPPTTM 1728
Score = 32.7 bits (73), Expect = 0.50
Identities = 38/177 (21%), Positives = 56/177 (31%), Gaps = 13/177 (7%)
Query: 163 TAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRT 222
T P T P P+ T ++ P P+ + ++ + P + P P T
Sbjct: 1397 TTPSPPTTTPSPPPTSTTTLPPTTTPSP-PTTTTTTPPPTTTPSPPITTTTTP---PPTT 1452
Query: 223 APFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQH 282
P + P T P ++ P P T P ++ T P T P
Sbjct: 1453 TPSPPISTTTTPPPTTTPSPPTTTPS--PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1510
Query: 283 PSRTA-------PFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPS 332
P+ T P T P T P + P P+ TT T P P+
Sbjct: 1511 PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 1567
Score = 32.0 bits (71), Expect = 0.85
Identities = 54/235 (22%), Positives = 71/235 (30%), Gaps = 21/235 (8%)
Query: 24 TAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGW 83
T T P P+ T T P P+ P I P T P T
Sbjct: 1553 TTTLPPTTTPSPPPTTTTTPPPTTTPSP-PTTTTPSPPTITTTTPPPTTTPSPPTTTTTT 1611
Query: 84 LPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQH 143
P T P T P P+ T ++ P P+ ++ T P P
Sbjct: 1612 PPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT---------TTTTPPPTTTPSP--- 1659
Query: 144 PSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHS 203
P+ T P T P T P T P+ T + P PS + S
Sbjct: 1660 PTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTT---MTTPSPTTTPSSPITTTTTPS 1716
Query: 204 SRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRT--APFQDSSLPRKHPSRTAP 256
S T P + T P + + P T +P + LP PS T P
Sbjct: 1717 STTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLP---PSITPP 1768
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 45.8 bits (107), Expect = 6e-05
Identities = 87/343 (25%), Positives = 118/343 (34%), Gaps = 52/343 (15%)
Query: 34 GRHPSRTAPFQDGTLPGQRP------SRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSR 87
G P+ T P+ G P S M P G P S + F P W P+
Sbjct: 1512 GISPAMT-PWNQGATPAYGAWSPSVGSGMTPGAAGFSPSA-ASDASGFSPGYSPAWSPTP 1569
Query: 88 TAPFQDNTLPGRHPSG----------TAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDG 137
+P PS T+P + PG + + S+ S T+P
Sbjct: 1570 GSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSY-----SPTSPSYSP 1624
Query: 138 SLPGQHP-----SRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHP 192
+ P P S T+P T P + P T+P T P P T+P + P P
Sbjct: 1625 TSPSYSPTSPNYSPTSPSYSPTSPSYSP--TSPSYSPTSPSYSP--TSPSYSPTSPSYSP 1680
Query: 193 -SRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHP 251
S S S T+P + P P T+P P T+P + P P
Sbjct: 1681 TSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSPTSPSYSP--TSPSYSPTSPSYSP 1736
Query: 252 SRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLP 311
T+P + P + S T+P T P P T+P T P P T+P P
Sbjct: 1737 --TSPSYSPTSP--NYSPTSPNYTPTSPSYSP--TSPSYSPTSPNYTP--TSPNYSPTSP 1788
Query: 312 GRLPSRTTPFQDGTLPGQHPSR-----MAPFQDSSLSGWLPSS 349
P T+P T P PS +P S + PSS
Sbjct: 1789 SYSP--TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 44.3 bits (103), Expect = 2e-04
Identities = 80/308 (25%), Positives = 107/308 (34%), Gaps = 55/308 (17%)
Query: 33 PGRHPSRTAPFQDG--TLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAP 90
PGR+ S+ A Q+ G M N P H R A + P+ P
Sbjct: 590 PGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKK--------PAPAPP 641
Query: 91 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPF 150
N PG HP G Q SS QHP + S P + S P QH +
Sbjct: 642 KPGNPPPG-HPGG----QSSSGTSQHPPSL--------SPKPPTRSPSPPTQHTGQ---- 684
Query: 151 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSF-PGQHPSRIASFQGRHSSRTAPF 209
P PS AP Q + P R+ S +P Q + P Q P++ + P
Sbjct: 685 -----PPGQPS--APSQ-LSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPP 736
Query: 210 QDGSLPGQH----PSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGK 265
+LP +H PS T P + P T P L +++PS AP +L G
Sbjct: 737 NPMALPSEHGLEQPSHTPPQTPT------PPSTPP-----LGKQNPSLPAP---QTLAGG 782
Query: 266 HLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGT 325
+ TA TLP P + P P DS+L P+ + D
Sbjct: 783 N-PETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAPTASKIVTDSN 841
Query: 326 LPGQHPSR 333
P R
Sbjct: 842 SRVSEPHR 849
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 44.3 bits (103), Expect = 2e-04
Identities = 80/308 (25%), Positives = 107/308 (34%), Gaps = 55/308 (17%)
Query: 33 PGRHPSRTAPFQDG--TLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAP 90
PGR+ S+ A Q+ G M N P H R A + P+ P
Sbjct: 512 PGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKK--------PAPAPP 563
Query: 91 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPF 150
N PG HP G Q SS QHP + S P + S P QH +
Sbjct: 564 KPGNPPPG-HPGG----QSSSGTSQHPPSL--------SPKPPTRSPSPPTQHTGQ---- 606
Query: 151 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSF-PGQHPSRIASFQGRHSSRTAPF 209
P PS AP Q + P R+ S +P Q + P Q P++ + P
Sbjct: 607 -----PPGQPS--APSQ-LSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPP 658
Query: 210 QDGSLPGQH----PSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGK 265
+LP +H PS T P + P T P L +++PS AP +L G
Sbjct: 659 NPMALPSEHGLEQPSHTPPQTPT------PPSTPP-----LGKQNPSLPAP---QTLAGG 704
Query: 266 HLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGT 325
+ TA TLP P + P P DS+L P+ + D
Sbjct: 705 N-PETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAPTASKIVTDSN 763
Query: 326 LPGQHPSR 333
P R
Sbjct: 764 SRVSEPHR 771
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.9 bits (102), Expect = 2e-04
Identities = 58/241 (24%), Positives = 80/241 (33%), Gaps = 16/241 (6%)
Query: 97 PGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLP 156
PG + PF S PG+ P G S P Q +P P + D++P
Sbjct: 131 PGGRSTSAKPFSPPSGPGRFP---VPSPGHRSGPPEP-QRNRMPPPRPD--VGSKPDSIP 184
Query: 157 GWLPSRTAPFQDNT-LPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLP 215
+PS P Q + G P P Q S P P F G +R GS+
Sbjct: 185 PPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPP-----FPG---NRGTALGGGSIR 236
Query: 216 GQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQD 275
S ++PF + L PSR + P +R + + + P + P
Sbjct: 237 QSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296
Query: 276 NTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMA 335
P P + PG P + + P RLP R T P P R
Sbjct: 297 TPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETP-RLPQRNLSLSSSTPPLPSPGRSG 355
Query: 336 P 336
P
Sbjct: 356 P 356
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.9 bits (102), Expect = 2e-04
Identities = 58/241 (24%), Positives = 80/241 (33%), Gaps = 16/241 (6%)
Query: 97 PGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLP 156
PG + PF S PG+ P G S P Q +P P + D++P
Sbjct: 131 PGGRSTSAKPFSPPSGPGRFP---VPSPGHRSGPPEP-QRNRMPPPRPD--VGSKPDSIP 184
Query: 157 GWLPSRTAPFQDNT-LPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLP 215
+PS P Q + G P P Q S P P F G +R GS+
Sbjct: 185 PPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPP-----FPG---NRGTALGGGSIR 236
Query: 216 GQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQD 275
S ++PF + L PSR + P +R + + + P + P
Sbjct: 237 QSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296
Query: 276 NTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMA 335
P P + PG P + + P RLP R T P P R
Sbjct: 297 TPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETP-RLPQRNLSLSSSTPPLPSPGRSG 355
Query: 336 P 336
P
Sbjct: 356 P 356
>gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens]
Length = 757
Score = 43.9 bits (102), Expect = 2e-04
Identities = 54/253 (21%), Positives = 87/253 (34%), Gaps = 24/253 (9%)
Query: 106 PFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAP 165
P+ + ++P P A HSS + + + HP+ + Q +P P+ +
Sbjct: 423 PYPEPTWP---PPLSAPRVPYHSSVLSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRD 479
Query: 166 FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAP- 224
Q + +P + +Q H ++ + Q P P P+ +P
Sbjct: 480 HQIPVIAANYPDLPSAYQPGILSVSHSAQPPAHQ-------PPMISTKYPELFPAHQSPM 532
Query: 225 FQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHS---SLPGKHLSRTAPFQDNTLPGQ 281
F D+ + G + P +P H P + RT Q +P
Sbjct: 533 FPDTRVAGTQTTTHLP----GIPPNHAPLVTTLGAQLPPQAPDALVLRTQATQLPIIPTA 588
Query: 282 HPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQDGTLPGQHPSRMAP----- 336
PS T + P S A Q + LP LPS++ Q + HP AP
Sbjct: 589 QPSLTTTSRSPVSPAHQISVPAATQPAALPTLLPSQSPTNQTSPISPTHPHSKAPQIPRE 648
Query: 337 -FQDSSLSGWLPS 348
L+ WLPS
Sbjct: 649 DGPSPKLALWLPS 661
Score = 37.7 bits (86), Expect = 0.015
Identities = 51/221 (23%), Positives = 73/221 (33%), Gaps = 28/221 (12%)
Query: 28 QDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRH----PSRTAPFQDDTLPGW 83
Q +P HP+ + Q + P + +Q GIL H P+ P P
Sbjct: 465 QPPVIPATHPALSRDHQIPVIAANYPDLPSAYQPGILSVSHSAQPPAHQPPMISTKYPEL 524
Query: 84 LPSRTAP-FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQ 142
P+ +P F D + G + P P H + + LP Q
Sbjct: 525 FPAHQSPMFPDTRVAGTQTTTHLP----GIPPNHAPLVTTL------------GAQLPPQ 568
Query: 143 HPS----RTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASF 198
P RT Q +P PS T + P S A Q ++ P PS+ +
Sbjct: 569 APDALVLRTQATQLPIIPTAQPSLTTTSRSPVSPAHQISVPAATQPAALPTLLPSQSPTN 628
Query: 199 QGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTA 239
Q +S +P S Q P P L P+ TA
Sbjct: 629 Q---TSPISPTHPHSKAPQIPREDGPSPKLALWLPSPAPTA 666
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 42.4 bits (98), Expect = 6e-04
Identities = 69/266 (25%), Positives = 82/266 (30%), Gaps = 35/266 (13%)
Query: 76 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIA-SFQGRHSSRTAPF 134
Q L P+ AP P P GT PG PS A QG ++ AP
Sbjct: 176 QQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPT---PGPTPSATAVPPQGSPTASQAPN 232
Query: 135 QDGSLPGQHPSRTAPFQD-DTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
Q Q P+ P P P R + P HPS P Q + PS
Sbjct: 233 QP-----QAPTAPVPHTHIQQAPALHPQRPP----SPHPPPHPSPHPPLQPLTGSAGQPS 283
Query: 194 RIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSR 253
+ Q P PG H + P L QHP PF LP +
Sbjct: 284 APSHAQ-------PPLHGQGPPGPHSLQAGP------LLQHPGPPQPF---GLPPQASQG 327
Query: 254 TAPFQHSSLPG-KHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQH--PSRTAPFQDSNL 310
AP S H S P + L Q P R P L H P T P L
Sbjct: 328 QAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPI--PQL 385
Query: 311 PGRLPSRTTPFQDGTLPGQHPSRMAP 336
P + P G P + + P
Sbjct: 386 PAPQAHKHPPHLSGPSPFSMNANLPP 411
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.4 bits (98), Expect = 6e-04
Identities = 69/266 (25%), Positives = 82/266 (30%), Gaps = 35/266 (13%)
Query: 76 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIA-SFQGRHSSRTAPF 134
Q L P+ AP P P GT PG PS A QG ++ AP
Sbjct: 730 QQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPT---PGPTPSATAVPPQGSPTASQAPN 786
Query: 135 QDGSLPGQHPSRTAPFQD-DTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
Q Q P+ P P P R + P HPS P Q + PS
Sbjct: 787 QP-----QAPTAPVPHTHIQQAPALHPQRPP----SPHPPPHPSPHPPLQPLTGSAGQPS 837
Query: 194 RIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSR 253
+ Q P PG H + P L QHP PF LP +
Sbjct: 838 APSHAQ-------PPLHGQGPPGPHSLQAGP------LLQHPGPPQPF---GLPPQASQG 881
Query: 254 TAPFQHSSLPG-KHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQH--PSRTAPFQDSNL 310
AP S H S P + L Q P R P L H P T P L
Sbjct: 882 QAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPI--PQL 939
Query: 311 PGRLPSRTTPFQDGTLPGQHPSRMAP 336
P + P G P + + P
Sbjct: 940 PAPQAHKHPPHLSGPSPFSMNANLPP 965
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.4 bits (98), Expect = 6e-04
Identities = 69/266 (25%), Positives = 82/266 (30%), Gaps = 35/266 (13%)
Query: 76 QDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIA-SFQGRHSSRTAPF 134
Q L P+ AP P P GT PG PS A QG ++ AP
Sbjct: 730 QQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPT---PGPTPSATAVPPQGSPTASQAPN 786
Query: 135 QDGSLPGQHPSRTAPFQD-DTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPS 193
Q Q P+ P P P R + P HPS P Q + PS
Sbjct: 787 QP-----QAPTAPVPHTHIQQAPALHPQRPP----SPHPPPHPSPHPPLQPLTGSAGQPS 837
Query: 194 RIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSR 253
+ Q P PG H + P L QHP PF LP +
Sbjct: 838 APSHAQ-------PPLHGQGPPGPHSLQAGP------LLQHPGPPQPF---GLPPQASQG 881
Query: 254 TAPFQHSSLPG-KHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQH--PSRTAPFQDSNL 310
AP S H S P + L Q P R P L H P T P L
Sbjct: 882 QAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPI--PQL 939
Query: 311 PGRLPSRTTPFQDGTLPGQHPSRMAP 336
P + P G P + + P
Sbjct: 940 PAPQAHKHPPHLSGPSPFSMNANLPP 965
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 41.2 bits (95), Expect = 0.001
Identities = 74/323 (22%), Positives = 102/323 (31%), Gaps = 49/323 (15%)
Query: 33 PGRHPSRTA-PFQDGTLPGQRPSRMAPFQNGILPGRH-PSRTAPFQDDTLPG----WLP- 85
PG +T P T Q + + F LPG H P T PG W+P
Sbjct: 1128 PGLADQKTGTPTVTSTSYSQHREKPSIFHQQALPGTHIPEEAQKVSAVTGPGNQKTWIPR 1187
Query: 86 -------SRTAP--FQDNTLPGRH-PSGTAPFQDSSFPGQHPSRI---ASFQGRHSSRTA 132
R P F TLPG H P P + S H+ +
Sbjct: 1188 VLSTFYSQREKPGIFYQQTLPGSHIPEEAQKVSPVLGPADQKTGTPTPTSASYSHTEKPG 1247
Query: 133 PFQDGSLPGQHPSRTA----------------PFQDDTLPGWLPSRTAPFQDNTLPGRHP 176
F LP HP+ A P T + + F +LP H
Sbjct: 1248 IFYQQVLPDNHPTEEALKISVASEPVDQTTGTPAVTSTSYSQYREKPSIFYQQSLPSSHL 1307
Query: 177 SGTAPFQDSSFPGQHPSR-----IASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLL 231
+ A S+ PG + + S H+ + F LP HP+ A
Sbjct: 1308 TEEAK-NVSAVPGPADQKTVIPILPSTFYSHTEKPGVFYQQVLPHSHPTEEALKISVASE 1366
Query: 232 GQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQD 291
+ P S+ +H + + F SLPG HL+ A + +PG +T
Sbjct: 1367 PVDQTTGTPTVTSTSYSQHTEKPSIFYQQSLPGSHLTEEAK-NVSAVPGPGDRKTG---I 1422
Query: 292 DTLPG---QHPSRTAPFQDSNLP 311
TLP H + F LP
Sbjct: 1423 PTLPSTFYSHTEKPGSFYQQVLP 1445
>gi|239749927 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 40.4 bits (93), Expect = 0.002
Identities = 67/237 (28%), Positives = 77/237 (32%), Gaps = 33/237 (13%)
Query: 22 RWTAPFQDDTLPGRHPSRTAPFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLP 81
RWT D+ P HPS + P PS I P HP T P
Sbjct: 3 RWTCVQSRDSHPSIHPSINSFIH----PSMHPS--------IHPFIHP---PTIHSSTHP 47
Query: 82 GWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSL-P 140
PS T P HPS PF P HPS S H S P +
Sbjct: 48 SIHPSIHPSIHPPTHPSIHPS-IHPF---IHPSIHPSIHLSI---HQSIIHPLIYPLIYL 100
Query: 141 GQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQG 200
HPS F P PS + P HPS +P S+ HPS
Sbjct: 101 SIHPSIHPSFHASIYPPIHPSIHLSTHLSIHPPIHPSVHSPIHLSTHLSIHPS------- 153
Query: 201 RHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPF 257
HSS + P HPS S L HP F +++L K SR F
Sbjct: 154 VHSSIHSSIHSSIHPSTHPSIHPLIHPSIHLSIHPEN---FYEAALSTKSTSRMCIF 207
Score = 35.4 bits (80), Expect = 0.077
Identities = 57/228 (25%), Positives = 69/228 (30%), Gaps = 33/228 (14%)
Query: 138 SLPGQHPSRTAPFQDDTLPGWLPSRTAP-FQDNTLPGRHPSGTAPFQDSSFPGQHPSRIA 196
S P HPS + P P P +T P HPS + P HPS
Sbjct: 12 SHPSIHPSINSFIHPSMHPSIHPFIHPPTIHSSTHPSIHPSIHPSIHPPTHPSIHPS--- 68
Query: 197 SFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNL---------LGQHPSRTAPFQDSSLP 247
PF S+ HPS S + L HPS F S P
Sbjct: 69 ---------IHPFIHPSI---HPSIHLSIHQSIIHPLIYPLIYLSIHPSIHPSFHASIYP 116
Query: 248 RKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQD 307
HPS S P H S +P +T HPS + HPS
Sbjct: 117 PIHPSIHLSTHLSIHPPIHPSVHSPIHLSTHLSIHPSVHSSIHSSIHSSIHPSTHPSIHP 176
Query: 308 SNLPG-RLPSRTTPFQDGTLPGQHPSRMAPF-------QDSSLSGWLP 347
P L F + L + SRM F + + WLP
Sbjct: 177 LIHPSIHLSIHPENFYEAALSTKSTSRMCIFGARGLLLSEGTRESWLP 224
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 40.0 bits (92), Expect = 0.003
Identities = 82/322 (25%), Positives = 104/322 (32%), Gaps = 61/322 (18%)
Query: 49 PGQRPSRMAPFQNG--ILPGRHPSRTAPFQDDTLPGWLPSR-TAPFQDNTLPGRHPSGTA 105
P Q P+ P G + P S+ +P +P P + P +LP + P G +
Sbjct: 729 PAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDS 788
Query: 106 PFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWL------ 159
P S P + PSR S R S + P S P HP P TLPG
Sbjct: 789 PHLPSPHPTRPPSRPPS---RPQSVSRP---PSEPPLHPC-PPPQAPPTLPGIFVIQNQL 841
Query: 160 ----------PSRTAPFQDNTLP-GRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAP 208
P+ P Q P + P G P P S +AS S AP
Sbjct: 842 GVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAP 901
Query: 209 ----FQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPG 264
FQ P Q P ++ + L P+ P PR T PF P
Sbjct: 902 TPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPP----PPPRTFQMVTTPFPALPQPK 957
Query: 265 KHLSR---------------TAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRT------- 302
L R AP T P T+P + GQ PS T
Sbjct: 958 ALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGP-LTSPAASVLVSGQAPSGTPTAPSHA 1016
Query: 303 ---APFQDSNLPGRLPSRTTPF 321
AP + LP LP+ F
Sbjct: 1017 PAPAPMAATGLPPLLPAENKAF 1038
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 39.7 bits (91), Expect = 0.004
Identities = 75/315 (23%), Positives = 102/315 (32%), Gaps = 33/315 (10%)
Query: 31 TLPGRHPSRTAPFQDGT---LPGQRPSRMAPFQNGILPGRHP-SRTAPFQDDTLPGWLPS 86
T P P T P + P R P G LP P S P DT G
Sbjct: 926 TSPPEPPYSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVG--SR 983
Query: 87 RTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSR 146
+ + LP H + P Q A H + G P P R
Sbjct: 984 EKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHA-----HPPHPPEMETGGSPDDPPPR 1038
Query: 147 TAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPG----QHPSRIASFQGRH 202
A +L GW +P P H S S P Q P R AS
Sbjct: 1039 LALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAMYV 1098
Query: 203 SSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSL 262
+R+ + G L Q P Q L PS T+P + P+ P+ AP + +S+
Sbjct: 1099 PARSGRGRKGPLVKQTKVEGEP-QKGGGLPPAPSPTSP----ASPQPPPAVAAPSEKNSI 1153
Query: 263 PGKHLSRTAP--------FQDNTLPGQHPSRTAPFQDDTLPGQHPS---RTAPFQDSNLP 311
P + AP Q ++ + P++ P G PS +P S P
Sbjct: 1154 PIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGSSPSPAPAMSPVPPS--P 1211
Query: 312 GRLPSRTTPFQDGTL 326
+P+ +P TL
Sbjct: 1212 SPVPTPASPSGPATL 1226
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 39.3 bits (90), Expect = 0.005
Identities = 72/283 (25%), Positives = 90/283 (31%), Gaps = 22/283 (7%)
Query: 69 PSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIAS--FQGR 126
P T + P P + P T P PS A + P Q P +AS QG
Sbjct: 552 PLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIA-----TPPPQAPPALASPPLQGL 606
Query: 127 HSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSS 186
S +P + P Q P A LP AP P P T Q +
Sbjct: 607 PSPPLSPL--ATPPPQAPPXLA----------LPPLQAPPSPPASPPLSPLATPSPQAPN 654
Query: 187 FPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSL 246
H + APF + P PS T P Q L P + P +S
Sbjct: 655 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS- 713
Query: 247 PRKHPSRTAPFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQ 306
P PS T P Q + P P P PS T P + L P + P
Sbjct: 714 PPMSPSATPPPQ-APPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP 772
Query: 307 DSNLPGRLPSRTTPFQDGTLPGQHPSRMAPFQDSSLSGWLPSS 349
++LP P P Q P + P +S G P S
Sbjct: 773 PASLP-MSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFS 814
Score = 37.4 bits (85), Expect = 0.020
Identities = 79/302 (26%), Positives = 106/302 (35%), Gaps = 36/302 (11%)
Query: 41 APFQDGTLPGQRPSRMAPFQNGILPGRHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRH 100
APF P P APF P PS T P Q PS AP +P
Sbjct: 663 APFS----PPPSPPVQAPFSPPASPPVSPSATPPSQAP------PSLAAP--PLQVPPSP 710
Query: 101 PSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDDTLPGWLP 160
P+ ++ P Q P +A+ P + P PS T P + L P
Sbjct: 711 PASPPMSPSATPPPQAPPPLAA-----PPLQVPPSPPASPPMSPSATPPPRVPPLLAAPP 765
Query: 161 SRTAPFQDNTLPG---RHPSGTAPFQDSSFPGQH-PSRIASFQGRHSSRTAPFQDGSLPG 216
+ P +LP P AP ++ P Q PS ASF G+ APF +
Sbjct: 766 LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQ-----APFSPSASLP 820
Query: 217 QHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSR-TAPFQHSSLPGKHLSRTAPFQD 275
P T P Q +L + P +S + P R P +S+ G L+
Sbjct: 821 MSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGP 880
Query: 276 NTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQ-----DSNLPGRLPSRTTPFQDGTLPGQH 330
P + PS T D L G S T+ + DS G + +P D L H
Sbjct: 881 PPPPSRSPSSTLSGPD--LAGHSSSATSTPEELRGYDSGPEG--GAAASPPPDAELAACH 936
Query: 331 PS 332
P+
Sbjct: 937 PA 938
Score = 28.9 bits (63), Expect = 7.2
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 218 HPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRTAPFQHSSLPGKHLSRTAPFQDN- 276
HPS+ P L P + P + + P P ++P S P +R P DN
Sbjct: 268 HPSQPKP---KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS-PSGTKARPVPPPDNA 323
Query: 277 ------TLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRLPSRTTPFQ 322
TLP P T LP PS +AP LP P T P Q
Sbjct: 324 ATPLPATLPPSPPLATP------LPLAPPSPSAPPSLQTLPS--PPATPPSQ 367
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,748,846
Number of Sequences: 37866
Number of extensions: 1161022
Number of successful extensions: 4482
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 3265
Number of HSP's gapped (non-prelim): 718
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.