LOC100290483 19952

Name: LOC100290483	Sequence: fasta or formatted (349aa)		NCBI GI: 239749340
Description: PREDICTED: hypothetical protein XP_002347000		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 20 1 C cysteine 0.0 0 0 D aspartate 6.0 21 2 E glutamate 0.9 3 1 F phenylalanine 6.6 23 1 G glycine 8.9 31 1 H histidine 5.2 18 1 I isoleucine 0.9 3 1 K lysine 0.6 2 1 L leucine 7.4 26 2 M methionine 0.9 3 1 N asparagine 1.7 6 1 P proline 15.8 55 1 Q glutamine 9.5 33 1 R arginine 8.6 30 2 S serine 11.7 41 2 T threonine 7.7 27 2 V valine 0.6 2 1 W tryptophan 1.4 5 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347000 LOC100128719 0.054 PREDICTED: hypothetical protein, partial LOC100128719 0.054 PREDICTED: hypothetical protein, partial LOC100134147 0.047 PREDICTED: hypothetical protein LOC100131525 0.040 PREDICTED: hypothetical protein LOC100293557 0.037 PREDICTED: hypothetical protein MAPK1IP1L 0.037 MAPK-interacting and spindle-stabilizing protein [Ho... LOC100288473 0.036 PREDICTED: hypothetical protein XP_002343336 LOC100291393 0.035 PREDICTED: hypothetical protein XP_002347924 FLJ22184 0.030 PREDICTED: hypothetical protein FLJ22184 PRG4 0.030 proteoglycan 4 isoform D PRG4 0.030 proteoglycan 4 isoform C PRG4 0.030 proteoglycan 4 isoform B PRG4 0.030 proteoglycan 4 isoform A FLJ22184 0.029 PREDICTED: hypothetical protein LOC80164 MUC2 0.029 mucin 2 precursor POLR2A 0.029 DNA-directed RNA polymerase II A ARHGAP17 0.026 nadrin isoform 1 ARHGAP17 0.026 nadrin isoform 2 WIPF1 0.026 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.026 WAS/WASL interacting protein family, member 1 CD248 0.026 tumor endothelial marker 1 precursor RERE 0.024 atrophin-1 like protein isoform b RERE 0.024 atrophin-1 like protein isoform a RERE 0.024 atrophin-1 like protein isoform a ALMS1 0.022 Alstrom syndrome 1 LOC100133439 0.021 PREDICTED: hypothetical protein GLTSCR1 0.021 glioma tumor suppressor candidate region gene 1 [Ho... SHANK1 0.021 SH3 and multiple ankyrin repeat domains 1 FLJ22184 0.019 PREDICTED: hypothetical protein FLJ22184 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.