RERE 960

Name: RERE	Sequence: fasta or formatted (1566aa)		NCBI GI: 112382216
Description: atrophin-1 like protein isoform a		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt mRNA [1566aa] atrophin-1 like protein isoform a alt prot [1012aa] atrophin-1 like protein isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 129 3 C cysteine 1.3 20 2 D aspartate 5.1 80 2 E glutamate 6.9 108 2 F phenylalanine 2.3 36 2 G glycine 5.4 84 2 H histidine 4.7 74 3 I isoleucine 2.6 40 1 K lysine 5.0 79 3 L leucine 7.2 113 2 M methionine 1.8 28 1 N asparagine 2.7 43 2 P proline 14.4 225 5 Q glutamine 5.2 81 3 R arginine 6.9 108 2 S serine 9.5 148 3 T threonine 5.2 82 3 V valine 3.0 47 2 W tryptophan 0.4 6 1 Y tyrosine 2.2 35 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 atrophin-1 like protein isoform a RERE 1.000 atrophin-1 like protein isoform a RERE 0.644 atrophin-1 like protein isoform b ATN1 0.211 atrophin-1 ATN1 0.211 atrophin-1 MTA3 0.042 metastasis associated 1 family, member 3 MTA2 0.041 metastasis-associated protein 2 MTA1 0.040 metastasis associated protein FLJ22184 0.040 PREDICTED: hypothetical protein FLJ22184 BRD4 0.038 bromodomain-containing protein 4 isoform long NACA 0.038 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.035 PREDICTED: hypothetical protein FLJ22184 RAPH1 0.034 Ras association and pleckstrin homology domains 1 is... PRG4 0.033 proteoglycan 4 isoform B FMN2 0.033 formin 2 PRG4 0.033 proteoglycan 4 isoform A FLJ22184 0.033 PREDICTED: hypothetical protein LOC80164 LOC646396 0.033 PREDICTED: similar to hCG2042704 PRG4 0.032 proteoglycan 4 isoform D PRG4 0.032 proteoglycan 4 isoform C PRB2 0.031 proline-rich protein BstNI subfamily 2 MLL2 0.030 myeloid/lymphoid or mixed-lineage leukemia 2 SF1 0.028 splicing factor 1 isoform 1 MUC2 0.028 mucin 2 precursor PRB1 0.027 proline-rich protein BstNI subfamily 1 isoform 1 pre... WIPF1 0.027 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.027 WAS/WASL interacting protein family, member 1 CCNK 0.027 cyclin K isoform 1 GLTSCR1 0.026 glioma tumor suppressor candidate region gene 1 [Ho... KIAA1522 0.026 hypothetical protein LOC57648 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.