| Name: CD248 | Sequence: fasta or formatted (757aa) | NCBI GI: 9966885 | |
|
Description: tumor endothelial marker 1 precursor
|
Referenced in:
| ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.0 83 3 C cysteine 4.6 35 1 D aspartate 4.4 33 2 E glutamate 5.7 43 2 F phenylalanine 2.4 18 1 G glycine 8.1 61 2 H histidine 3.0 23 1 I isoleucine 2.5 19 2 K lysine 0.9 7 1 L leucine 8.9 67 3 M methionine 1.1 8 1 N asparagine 1.1 8 1 P proline 12.5 95 3 Q glutamine 6.1 46 2 R arginine 5.3 40 3 S serine 6.6 50 2 T threonine 6.7 51 3 V valine 5.3 40 3 W tryptophan 2.1 16 1 Y tyrosine 1.8 14 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 tumor endothelial marker 1 precursor THBD 0.119 thrombomodulin precursor CD93 0.111 CD93 antigen precursor CLEC14A 0.064 C-type lectin domain family 14, member A MEGF6 0.045 EGF-like-domain, multiple 3 FBLN1 0.042 fibulin 1 isoform B precursor FBLN1 0.042 fibulin 1 isoform A precursor FBLN1 0.042 fibulin 1 isoform D FBLN1 0.042 fibulin 1 isoform C precursor FBLN2 0.040 fibulin 2 isoform b precursor FBLN2 0.040 fibulin 2 isoform a precursor VWCE 0.038 von Willebrand factor C and EGF domains SCUBE2 0.036 CEGP1 protein MATN2 0.036 matrilin 2 isoform b precursor MATN2 0.036 matrilin 2 isoform a precursor SCUBE3 0.036 signal peptide, CUB domain, EGF-like 3 FBLN5 0.035 fibulin 5 precursor LOC100128719 0.035 PREDICTED: hypothetical protein, partial LOC100128719 0.035 PREDICTED: hypothetical protein, partial SCUBE1 0.035 signal peptide, CUB domain, EGF-like 1 GAS6 0.034 growth arrest-specific 6 isoform 1 precursor MATN4 0.034 matrilin 4 isoform 1 precursor LRP2 0.034 low density lipoprotein-related protein 2 EFEMP2 0.033 EGF-containing fibulin-like extracellular matrix pr... FBN2 0.032 fibrillin 2 precursor FBN3 0.032 fibrillin 3 precursor LOC100134147 0.032 PREDICTED: hypothetical protein EFEMP1 0.031 EGF-containing fibulin-like extracellular matrix pro... EFEMP1 0.031 EGF-containing fibulin-like extracellular matrix pro... EFEMP1 0.031 EGF-containing fibulin-like extracellular matrix prot...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
