Guide to the Human Genome
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Name: PRR3 Sequence: fasta or formatted (188aa) NCBI GI: 117320535
Description:

proline-rich protein 3 isoform a

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [167aa] proline-rich protein 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7          5           1
 C cysteine            2.1          4           1
 D aspartate           4.3          8           2
 E glutamate           4.8          9           2
 F phenylalanine       2.1          4           1
 G glycine            12.8         24           2
 H histidine           4.3          8           2
 I isoleucine          2.1          4           1
 K lysine              6.4         12           2
 L leucine             6.9         13           2
 M methionine          1.6          3           1
 N asparagine          3.2          6           1
 P proline            20.7         39           4
 Q glutamine           3.7          7           3
 R arginine            8.5         16           2
 S serine              5.9         11           2
 T threonine           2.1          4           1
 V valine              2.1          4           1
 W tryptophan          2.1          4           2
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline-rich protein 3 isoform a 
PRR3                  0.855   proline-rich protein 3 isoform b 
PPP1R10               0.117   protein phosphatase 1, regulatory subunit 10 
PRB2                  0.077   proline-rich protein BstNI subfamily 2 
PRB1                  0.075   proline-rich protein BstNI subfamily 1 isoform 1 pre...
COL17A1               0.068   alpha 1 type XVII collagen 
WBP11                 0.068   WW domain binding protein 11 
PLEKHA6               0.062   phosphoinositol 3-phosphate-binding protein-3 
COL10A1               0.062   type X collagen alpha 1 precursor 
COL1A1                0.062   alpha 1 type I collagen preproprotein 
PRB4                  0.062   proline-rich protein BstNI subfamily 4 precursor [Ho...
COL5A2                0.060   alpha 2 type V collagen preproprotein 
PRB1                  0.060   proline-rich protein BstNI subfamily 1 isoform 2 pre...
PRB3                  0.060   proline-rich protein BstNI subfamily 3 precursor [H...
WIPF1                 0.058   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.058   WAS/WASL interacting protein family, member 1 
COL3A1                0.058   collagen type III alpha 1 preproprotein 
COL9A1                0.058   alpha 1 type IX collagen isoform 1 precursor 
COL9A1                0.058   alpha 1 type IX collagen isoform 2 precursor 
BCL9                  0.058   B-cell CLL/lymphoma 9 
COL16A1               0.058   alpha 1 type XVI collagen precursor 
ESX1                  0.058   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
WIPF2                 0.055   WIRE protein 
WAS                   0.055   Wiskott-Aldrich syndrome protein 
SFPQ                  0.055   splicing factor proline/glutamine rich (polypyrimidin...
COL5A1                0.055   alpha 1 type V collagen preproprotein 
CPSF6                 0.055   cleavage and polyadenylation specific factor 6, 68 ...
EMID2                 0.052   EMI domain containing 2 
COL22A1               0.052   collagen, type XXII, alpha 1 
COL1A2                0.050   alpha 2 type I collagen 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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