Guide to the Human Genome
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Name: WAS Sequence: fasta or formatted (502aa) NCBI GI: 4507909
Description:

Wiskott-Aldrich syndrome protein

Referenced in:

Cytoskeleton
Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         37           1
 C cysteine            0.8          4           1
 D aspartate           5.6         28           2
 E glutamate           4.8         24           2
 F phenylalanine       2.4         12           2
 G glycine            12.5         63           3
 H histidine           1.8          9           1
 I isoleucine          3.0         15           1
 K lysine              3.4         17           3
 L leucine             9.0         45           2
 M methionine          1.4          7           1
 N asparagine          2.8         14           2
 P proline            18.1         91          11
 Q glutamine           6.2         31           2
 R arginine            6.2         31           2
 S serine              6.0         30           2
 T threonine           3.0         15           1
 V valine              3.6         18           2
 W tryptophan          0.8          4           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Wiskott-Aldrich syndrome protein 
WASL                  0.406   Wiskott-Aldrich syndrome gene-like protein 
WASF2                 0.096   WAS protein family, member 2 
FMN2                  0.089   formin 2 
DIAPH1                0.077   diaphanous 1 isoform 2 
DIAPH1                0.077   diaphanous 1 isoform 1 
PRB2                  0.074   proline-rich protein BstNI subfamily 2 
CPSF6                 0.067   cleavage and polyadenylation specific factor 6, 68 ...
FMNL1                 0.065   formin-like 1 
FMN1                  0.065   formin 1 
PRB1                  0.065   proline-rich protein BstNI subfamily 1 isoform 1 pre...
INF2                  0.064   inverted formin 2 isoform 2 
INF2                  0.064   inverted formin 2 isoform 1 
WIPF1                 0.064   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.064   WAS/WASL interacting protein family, member 1 
CCNK                  0.062   cyclin K isoform 1 
SFPQ                  0.061   splicing factor proline/glutamine rich (polypyrimidin...
PRR12                 0.060   proline rich 12 
WASF3                 0.059   WAS protein family, member 3 
WBP11                 0.057   WW domain binding protein 11 
C6orf132              0.056   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.056   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.056   PREDICTED: hypothetical protein LOC647024 
PELP1                 0.056   proline, glutamic acid and leucine rich protein 1 [...
PRB1                  0.056   proline-rich protein BstNI subfamily 1 isoform 2 pre...
WIPF3                 0.055   WAS/WASL interacting protein family, member 3 [Homo...
SF3A2                 0.055   splicing factor 3a, subunit 2 
MLL4                  0.055   myeloid/lymphoid or mixed-lineage leukemia 4 
PRB4                  0.055   proline-rich protein BstNI subfamily 4 precursor [Ho...
RANBP9                0.054   RAN binding protein 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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