Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239746153
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746153 PREDICTED: similar to cytoskeletal beta actin
[Homo sapiens]
(378 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746153 PREDICTED: similar to cytoskeletal beta actin [Homo... 775 0.0
gi|169213772 PREDICTED: similar to actin alpha 1 skeletal muscle... 681 0.0
gi|169214234 PREDICTED: similar to actin alpha 1 skeletal muscle... 681 0.0
gi|4501885 beta actin [Homo sapiens] 245 4e-65
gi|4501887 actin, gamma 1 propeptide [Homo sapiens] 240 1e-63
gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens] 237 1e-62
gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens] 237 1e-62
gi|239741786 PREDICTED: kappa-actin [Homo sapiens] 237 1e-62
gi|239741769 PREDICTED: similar to protein expressed in prostate... 235 4e-62
gi|88953571 PREDICTED: similar to protein expressed in prostate,... 235 4e-62
gi|113413200 PREDICTED: similar to protein expressed in prostate... 234 1e-61
gi|134133226 protein expressed in prostate, ovary, testis, and p... 232 4e-61
gi|153791352 prostate, ovary, testis expressed protein on chromo... 232 4e-61
gi|4501883 alpha 2 actin [Homo sapiens] 230 1e-60
gi|213688375 alpha 2 actin [Homo sapiens] 230 1e-60
gi|4501889 actin, gamma 2 propeptide [Homo sapiens] 229 3e-60
gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens] 228 5e-60
gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens] 228 5e-60
gi|63055057 actin, beta-like 2 [Homo sapiens] 227 1e-59
gi|239750113 PREDICTED: similar to Actin, alpha 1, skeletal musc... 155 4e-38
gi|239755640 PREDICTED: similar to alpha actin [Homo sapiens] 152 5e-37
gi|11342680 ARP1 actin-related protein 1 homolog B, centractin b... 139 5e-33
gi|5031569 ARP1 actin-related protein 1 homolog A, centractin al... 136 3e-32
gi|29893808 actin-related protein M2 [Homo sapiens] 129 4e-30
gi|19923076 actin-related protein T1 [Homo sapiens] 126 3e-29
gi|5031571 actin-related protein 2 isoform b [Homo sapiens] 111 9e-25
gi|221139714 actin related protein M1 [Homo sapiens] 109 4e-24
gi|53692187 actin-related protein 2 isoform a [Homo sapiens] 107 2e-23
gi|5729720 actin-like 7A [Homo sapiens] 102 7e-22
gi|194097462 actin-like 9 [Homo sapiens] 96 5e-20
>gi|239746153 PREDICTED: similar to cytoskeletal beta actin [Homo
sapiens]
Length = 378
Score = 775 bits (2001), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Query: 1 MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG 60
MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG
Sbjct: 1 MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG 60
Query: 61 VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE 120
VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE
Sbjct: 61 VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE 120
Query: 121 NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP 180
NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP
Sbjct: 121 NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP 180
Query: 181 PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD 240
PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD
Sbjct: 181 PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD 240
Query: 241 SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN 300
SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN
Sbjct: 241 SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN 300
Query: 301 PKASHEKMTQIMSETFNSPSMYIAIQALLSLHVASSFSLKKRFQLPDSQVITISNERSPL 360
PKASHEKMTQIMSETFNSPSMYIAIQALLSLHVASSFSLKKRFQLPDSQVITISNERSPL
Sbjct: 301 PKASHEKMTQIMSETFNSPSMYIAIQALLSLHVASSFSLKKRFQLPDSQVITISNERSPL 360
Query: 361 SHGTFPAFLPGHGILWHP 378
SHGTFPAFLPGHGILWHP
Sbjct: 361 SHGTFPAFLPGHGILWHP 378
>gi|169213772 PREDICTED: similar to actin alpha 1 skeletal muscle
protein [Homo sapiens]
Length = 464
Score = 681 bits (1756), Expect = 0.0
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG 60
MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG
Sbjct: 1 MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG 60
Query: 61 VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE 120
VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE
Sbjct: 61 VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE 120
Query: 121 NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP 180
NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP
Sbjct: 121 NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP 180
Query: 181 PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD 240
PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD
Sbjct: 181 PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD 240
Query: 241 SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN 300
SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN
Sbjct: 241 SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN 300
Query: 301 PKASHEKMTQIMSETFNSPSMYIAIQALLSLH 332
PKASHEKMTQIMSETFNSPSMYIAIQALLSLH
Sbjct: 301 PKASHEKMTQIMSETFNSPSMYIAIQALLSLH 332
>gi|169214234 PREDICTED: similar to actin alpha 1 skeletal muscle
protein [Homo sapiens]
Length = 464
Score = 681 bits (1756), Expect = 0.0
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG 60
MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG
Sbjct: 1 MDIYSWYWMVNIPIGLSFFEKKCGKNTLSTVILLMGTEGPNGLFDVASPDGSATPADSCG 60
Query: 61 VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE 120
VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE
Sbjct: 61 VVQASVRRFLDYPGSIVTSATPRNTAQPTSPHEPHQSSERPDNTKEKVALRKQAPATKRE 120
Query: 121 NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP 180
NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP
Sbjct: 121 NWRAATSLPFGALEGAWLVVWAVGQDGTLQDSSFPPRGRNATAETASIPRAQSLALATLP 180
Query: 181 PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD 240
PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD
Sbjct: 181 PIHARCQLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKD 240
Query: 241 SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN 300
SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN
Sbjct: 241 SYVGEDAQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLN 300
Query: 301 PKASHEKMTQIMSETFNSPSMYIAIQALLSLH 332
PKASHEKMTQIMSETFNSPSMYIAIQALLSLH
Sbjct: 301 PKASHEKMTQIMSETFNSPSMYIAIQALLSLH 332
>gi|4501885 beta actin [Homo sapiens]
Length = 375
Score = 245 bits (626), Expect = 4e-65
Identities = 114/145 (78%), Positives = 131/145 (90%)
Query: 190 MDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQS 249
MDDDI LVV+NGSGMCK F GD+APRA+FPSIVG +HQGVMVG+GQKDSYVG++AQS
Sbjct: 1 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 250 KRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMT 309
KRG LTLKYPIE IVTNWDD+EKIWHHTFYNEL V+P+EHPVLLTEAPLNPKA+ EKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 310 QIMSETFNSPSMYIAIQALLSLHVA 334
QIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYAS 145
Score = 38.5 bits (88), Expect = 0.010
Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P+FL
Sbjct: 231 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 267
>gi|4501887 actin, gamma 1 propeptide [Homo sapiens]
Length = 375
Score = 240 bits (613), Expect = 1e-63
Identities = 110/145 (75%), Positives = 131/145 (90%)
Query: 190 MDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQS 249
M+++I LV++NGSGMCK F GD+APRA+FPSIVG +HQGVMVG+GQKDSYVG++AQS
Sbjct: 1 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 250 KRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMT 309
KRG LTLKYPIE IVTNWDD+EKIWHHTFYNEL V+P+EHPVLLTEAPLNPKA+ EKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 310 QIMSETFNSPSMYIAIQALLSLHVA 334
QIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYAS 145
Score = 38.5 bits (88), Expect = 0.010
Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P+FL
Sbjct: 231 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 267
>gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 237 bits (605), Expect = 1e-62
Identities = 107/148 (72%), Positives = 132/148 (89%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+AP+A+FPSIVG +HQG+M G+ QK+SYVG++
Sbjct: 547 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPQAVFPSIVGRPRHQGMMEGMHQKESYVGKE 606
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHP+LLTEAPLNPKA+ E
Sbjct: 607 AQSKRGMLTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 666
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 667 KMTQIMFETFNTPAMYVAIQAVLSLYTS 694
Score = 37.7 bits (86), Expect = 0.017
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 322 YIAIQALLSLHVA-SSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
Y+A+ + + +A SS S++K ++LPD QVITI NER F P FL
Sbjct: 767 YVALDSKQEMAMAASSSSVEKSYELPDGQVITIGNERFRCPEALFQPCFL 816
>gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 237 bits (605), Expect = 1e-62
Identities = 107/148 (72%), Positives = 132/148 (89%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+AP+A+FPSIVG +HQG+M G+ QK+SYVG++
Sbjct: 547 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPQAVFPSIVGRPRHQGMMEGMHQKESYVGKE 606
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHP+LLTEAPLNPKA+ E
Sbjct: 607 AQSKRGMLTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 666
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 667 KMTQIMFETFNTPAMYVAIQAVLSLYTS 694
Score = 37.4 bits (85), Expect = 0.022
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 322 YIAIQALLSLHVA-SSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
Y+A+ + + +A SS S++K ++LPD QVITI NER F P FL
Sbjct: 767 YVALDSEQEMAMAASSSSVEKSYELPDGQVITIGNERFRCPEALFQPCFL 816
>gi|239741786 PREDICTED: kappa-actin [Homo sapiens]
Length = 924
Score = 237 bits (605), Expect = 1e-62
Identities = 107/148 (72%), Positives = 132/148 (89%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+AP+A+FPSIVG +HQG+M G+ QK+SYVG++
Sbjct: 547 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPQAVFPSIVGRPRHQGMMEGMHQKESYVGKE 606
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHP+LLTEAPLNPKA+ E
Sbjct: 607 AQSKRGMLTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 666
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 667 KMTQIMFETFNTPAMYVAIQAVLSLYTS 694
Score = 37.4 bits (85), Expect = 0.022
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 322 YIAIQALLSLHVA-SSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
Y+A+ + + +A SS S++K ++LPD QVITI NER F P FL
Sbjct: 767 YVALDSEQEMAMAASSSSVEKSYELPDGQVITIGNERFRCPEALFQPCFL 816
>gi|239741769 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 952
Score = 235 bits (600), Expect = 4e-62
Identities = 107/148 (72%), Positives = 131/148 (88%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+APRA+FPSIVG + QG+M G+ QK+SYVG++
Sbjct: 575 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKE 634
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHP+LLTEAPLNPKA+ E
Sbjct: 635 AQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 694
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 695 KMTQIMFETFNTPAMYVAIQAMLSLYTS 722
Score = 35.0 bits (79), Expect = 0.11
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NE F P FL
Sbjct: 808 ASSSSLEKSYELPDGQVITIGNEWFRCPEALFQPCFL 844
>gi|88953571 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
Length = 1075
Score = 235 bits (600), Expect = 4e-62
Identities = 107/148 (72%), Positives = 131/148 (88%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+APRA+FPSIVG + QG+M G+ QK+SYVG++
Sbjct: 698 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKE 757
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHP+LLTEAPLNPKA+ E
Sbjct: 758 AQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 817
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 818 KMTQIMFETFNTPAMYVAIQAMLSLYTS 845
Score = 35.0 bits (79), Expect = 0.11
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NE F P FL
Sbjct: 931 ASSSSLEKSYELPDGQVITIGNEWFRCPEALFQPCFL 967
>gi|113413200 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 1038
Score = 234 bits (597), Expect = 1e-61
Identities = 107/148 (72%), Positives = 131/148 (88%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+APRA+FPSIVG + QG+M G+ QK+SYVG++
Sbjct: 661 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGCPRQQGMMGGMHQKESYVGKE 720
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHP+LLTEAPLNPKA+ E
Sbjct: 721 AQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 780
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 781 KMTQIMFETFNTPAMYVAIQAMLSLYTS 808
Score = 38.1 bits (87), Expect = 0.013
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 333 VASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
VASS SL+K ++LPD QVITISNE F P FL
Sbjct: 893 VASSSSLEKSYELPDGQVITISNEWFRCPEALFQPCFL 930
>gi|134133226 protein expressed in prostate, ovary, testis, and
placenta 2 [Homo sapiens]
Length = 1075
Score = 232 bits (592), Expect = 4e-61
Identities = 106/148 (71%), Positives = 130/148 (87%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+APRA+FPSIVG + QG+M G+ QK+SYVG++
Sbjct: 698 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKE 757
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHP+LLTEAPLNPKA+ E
Sbjct: 758 AQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 817
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+ SL+ +
Sbjct: 818 KMTQIMFETFNTPAMYVAIQAVPSLYTS 845
Score = 38.1 bits (87), Expect = 0.013
Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P FL
Sbjct: 931 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPCFL 967
>gi|153791352 prostate, ovary, testis expressed protein on
chromosome 2 [Homo sapiens]
Length = 1075
Score = 232 bits (592), Expect = 4e-61
Identities = 107/148 (72%), Positives = 130/148 (87%)
Query: 187 QLTMDDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGED 246
+LTMDDD VLV++NGSGMCK F GD+APRA+FPSIVG + QG+M G+ QK+SYVG++
Sbjct: 698 ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKE 757
Query: 247 AQSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHE 306
AQSKRG LTLKYP+E I+TNWDD+EKIWHHTFYNEL V+P+EHPVLLTEA LNPKA+ E
Sbjct: 758 AQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEATLNPKANRE 817
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLHVA 334
KMTQIM ETFN+P+MY+AIQA+LSL+ +
Sbjct: 818 KMTQIMFETFNTPAMYVAIQAVLSLYTS 845
Score = 39.7 bits (91), Expect = 0.005
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 333 VASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
VASS SL+K ++LPD QVITI NER F P FL
Sbjct: 930 VASSSSLEKSYELPDGQVITIGNERFRCPEALFQPCFL 967
>gi|4501883 alpha 2 actin [Homo sapiens]
Length = 377
Score = 230 bits (587), Expect = 1e-60
Identities = 105/144 (72%), Positives = 126/144 (87%)
Query: 191 DDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSK 250
++D LV +NGSG+CK F GD+APRA+FPSIVG +HQGVMVG+GQKDSYVG++AQSK
Sbjct: 4 EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63
Query: 251 RGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQ 310
RG LTLKYPIE I+TNWDD+EKIWHH+FYNEL V+P+EHP LLTEAPLNPKA+ EKMTQ
Sbjct: 64 RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123
Query: 311 IMSETFNSPSMYIAIQALLSLHVA 334
IM ETFN P+MY+AIQA+LSL+ +
Sbjct: 124 IMFETFNVPAMYVAIQAVLSLYAS 147
Score = 37.0 bits (84), Expect = 0.029
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P+F+
Sbjct: 233 ASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFI 269
>gi|213688375 alpha 2 actin [Homo sapiens]
Length = 377
Score = 230 bits (587), Expect = 1e-60
Identities = 105/144 (72%), Positives = 126/144 (87%)
Query: 191 DDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSK 250
++D LV +NGSG+CK F GD+APRA+FPSIVG +HQGVMVG+GQKDSYVG++AQSK
Sbjct: 4 EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63
Query: 251 RGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQ 310
RG LTLKYPIE I+TNWDD+EKIWHH+FYNEL V+P+EHP LLTEAPLNPKA+ EKMTQ
Sbjct: 64 RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123
Query: 311 IMSETFNSPSMYIAIQALLSLHVA 334
IM ETFN P+MY+AIQA+LSL+ +
Sbjct: 124 IMFETFNVPAMYVAIQAVLSLYAS 147
Score = 37.0 bits (84), Expect = 0.029
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P+F+
Sbjct: 233 ASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFI 269
>gi|4501889 actin, gamma 2 propeptide [Homo sapiens]
Length = 376
Score = 229 bits (584), Expect = 3e-60
Identities = 104/144 (72%), Positives = 126/144 (87%)
Query: 191 DDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSK 250
+++ LV +NGSG+CK F GD+APRA+FPSIVG +HQGVMVG+GQKDSYVG++AQSK
Sbjct: 3 EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 251 RGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQ 310
RG LTLKYPIE I+TNWDD+EKIWHH+FYNEL V+P+EHP LLTEAPLNPKA+ EKMTQ
Sbjct: 63 RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122
Query: 311 IMSETFNSPSMYIAIQALLSLHVA 334
IM ETFN P+MY+AIQA+LSL+ +
Sbjct: 123 IMFETFNVPAMYVAIQAVLSLYAS 146
Score = 37.0 bits (84), Expect = 0.029
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P+F+
Sbjct: 232 ASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFI 268
>gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens]
Length = 377
Score = 228 bits (582), Expect = 5e-60
Identities = 105/144 (72%), Positives = 125/144 (86%)
Query: 191 DDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSK 250
+D+ LV +NGSG+ K F GD+APRA+FPSIVG +HQGVMVG+GQKDSYVG++AQSK
Sbjct: 4 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63
Query: 251 RGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQ 310
RG LTLKYPIE I+TNWDD+EKIWHHTFYNEL V+P+EHP LLTEAPLNPKA+ EKMTQ
Sbjct: 64 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123
Query: 311 IMSETFNSPSMYIAIQALLSLHVA 334
IM ETFN P+MY+AIQA+LSL+ +
Sbjct: 124 IMFETFNVPAMYVAIQAVLSLYAS 147
Score = 37.0 bits (84), Expect = 0.029
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P+F+
Sbjct: 233 ASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFI 269
>gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens]
Length = 377
Score = 228 bits (582), Expect = 5e-60
Identities = 105/144 (72%), Positives = 125/144 (86%)
Query: 191 DDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSK 250
D++ LV +NGSG+ K F GD+APRA+FPSIVG +HQGVMVG+GQKDSYVG++AQSK
Sbjct: 4 DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63
Query: 251 RGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQ 310
RG LTLKYPIE I+TNWDD+EKIWHHTFYNEL V+P+EHP LLTEAPLNPKA+ EKMTQ
Sbjct: 64 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123
Query: 311 IMSETFNSPSMYIAIQALLSLHVA 334
IM ETFN P+MY+AIQA+LSL+ +
Sbjct: 124 IMFETFNVPAMYVAIQAVLSLYAS 147
Score = 37.0 bits (84), Expect = 0.029
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 334 ASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
ASS SL+K ++LPD QVITI NER F P+F+
Sbjct: 233 ASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFI 269
>gi|63055057 actin, beta-like 2 [Homo sapiens]
Length = 376
Score = 227 bits (579), Expect = 1e-59
Identities = 102/144 (70%), Positives = 126/144 (87%)
Query: 191 DDDIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSK 250
D+++ LVV+NGSGMCK F GD+APRA+FPS++G +HQGVMVG+GQKD YVG++AQSK
Sbjct: 3 DNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQSK 62
Query: 251 RGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQ 310
RG LTLKYPIE +VTNWDD+EKIW+HTFYNEL V+P EHP+LLTEAPLNPK + EKMTQ
Sbjct: 63 RGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122
Query: 311 IMSETFNSPSMYIAIQALLSLHVA 334
IM E FN+P+MY+AIQA+LSL+ +
Sbjct: 123 IMFEAFNTPAMYVAIQAVLSLYAS 146
Score = 33.9 bits (76), Expect = 0.25
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 331 LHVASSFSLKKRFQLPDSQVITISNERSPLSHGTF-PAFL 369
+ A+S S ++ ++LPD QVITI NER F P+FL
Sbjct: 229 VRAAASSSPERSYELPDGQVITIGNERFRCPEAIFQPSFL 268
>gi|239750113 PREDICTED: similar to Actin, alpha 1, skeletal muscle
[Homo sapiens]
Length = 420
Score = 155 bits (393), Expect = 4e-38
Identities = 72/179 (40%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
Query: 197 LVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRGNLTL 256
L+ + GSG KV F G +P +FP+++G L+H V+VG+ ++D ++GE+ Q K G L L
Sbjct: 6 LICDYGSGFSKVGFAGMESPMGMFPTVLGKLRHDNVLVGMEEEDWFIGEEVQKKXGKLNL 65
Query: 257 KYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQIMSETF 316
+YPI ++ TNWD++EKIWHH+FY LHV+P+++P+L+TE LNP S EK+TQ++ E F
Sbjct: 66 QYPISRATTTNWDNMEKIWHHSFYQVLHVAPEQYPMLVTEPSLNPTPSKEKVTQVLFEIF 125
Query: 317 NSPSMYIAIQALLSLHVA-SSFSLKKRFQLPDSQVITISNERSPLSHGTFPAFLPGHGI 374
N P++Y+A + +LSL+ + +F + + + I+ + PL TF + G +
Sbjct: 126 NIPALYLANRGVLSLYASGQTFGMTVESGEGMTHFVPIA-DGCPLHQSTFQVDIAGQDL 183
>gi|239755640 PREDICTED: similar to alpha actin [Homo sapiens]
Length = 369
Score = 152 bits (384), Expect = 5e-37
Identities = 71/179 (39%), Positives = 116/179 (64%), Gaps = 2/179 (1%)
Query: 197 LVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRGNLTL 256
L+ + SG KV F G +P +FP+++G L+H V+VG+ ++D ++GE+ Q K G L L
Sbjct: 6 LICDYCSGFSKVGFAGMESPMGMFPTVLGKLRHDNVLVGMEEEDWFIGEEVQKKXGKLNL 65
Query: 257 KYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQIMSETF 316
+YPI ++ TNWD++EKIWHH+FY LHV+P+++P+L+TE LNP S EK+TQ++ E F
Sbjct: 66 QYPISRATTTNWDNMEKIWHHSFYQVLHVAPEQYPMLVTEPSLNPTPSKEKVTQVLFEIF 125
Query: 317 NSPSMYIAIQALLSLHVA-SSFSLKKRFQLPDSQVITISNERSPLSHGTFPAFLPGHGI 374
N P++Y+A + +LSL+ + +F + + + I+ + PL TF + G +
Sbjct: 126 NIPALYLANRGVLSLYASGQTFGMTVESGEGMTHFVPIA-DGCPLHQSTFQVDIAGQDL 183
>gi|11342680 ARP1 actin-related protein 1 homolog B, centractin beta
[Homo sapiens]
Length = 376
Score = 139 bits (349), Expect = 5e-33
Identities = 62/137 (45%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
Query: 197 LVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRGNLTL 256
+V++NGSG+ K F GD P+ FP+ VG KH VM G + D ++G A+ RG LT+
Sbjct: 12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTI 71
Query: 257 KYPIEQSIVTNWDDIEKIWHHTF-YNELHVSPKEHPVLLTEAPLNPKASHEKMTQIMSET 315
+YP+E +V +W+D+E+IW + + ++L +EHPVLLTEAPLNP + EK ++ ET
Sbjct: 72 RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131
Query: 316 FNSPSMYIAIQALLSLH 332
FN P+++I++QA+LSL+
Sbjct: 132 FNVPALFISMQAVLSLY 148
>gi|5031569 ARP1 actin-related protein 1 homolog A, centractin alpha
[Homo sapiens]
Length = 376
Score = 136 bits (343), Expect = 3e-32
Identities = 61/137 (44%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Query: 197 LVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRGNLTL 256
+V++NGSG+ K F GD P+ FP+ VG KH VM G + D ++G A+ RG L++
Sbjct: 12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71
Query: 257 KYPIEQSIVTNWDDIEKIWHHTF-YNELHVSPKEHPVLLTEAPLNPKASHEKMTQIMSET 315
+YP+E IV +W+D+E+IW + + ++L +EHPVLLTEAPLNP+ + E+ ++ ET
Sbjct: 72 RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131
Query: 316 FNSPSMYIAIQALLSLH 332
FN P+++I++QA+LSL+
Sbjct: 132 FNVPALFISMQAVLSLY 148
>gi|29893808 actin-related protein M2 [Homo sapiens]
Length = 377
Score = 129 bits (324), Expect = 4e-30
Identities = 60/143 (41%), Positives = 88/143 (61%)
Query: 193 DIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRG 252
D ++ +NGSG CK G+ PR + SIVGHLK Q QK +VGE+A K+
Sbjct: 8 DSPAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQAPSAEANQKKYFVGEEALYKQE 67
Query: 253 NLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQIM 312
L L P E+ ++T WDD+E++W H F EL V P + P+L TE LNP+ + EKM ++M
Sbjct: 68 ALQLHSPFERGLITGWDDVERLWKHLFEWELGVKPSDQPLLATEPSLNPRENREKMAEVM 127
Query: 313 SETFNSPSMYIAIQALLSLHVAS 335
E F P+ Y++ QA+L+L+ ++
Sbjct: 128 FENFGVPAFYLSDQAVLALYASA 150
>gi|19923076 actin-related protein T1 [Homo sapiens]
Length = 376
Score = 126 bits (317), Expect = 3e-29
Identities = 58/143 (40%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Query: 193 DIEVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRG 252
D+ ++ +NGSG+CK G+ PR + S++GH K + + QK +VG++A K
Sbjct: 8 DVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQK-YFVGQEALYKYE 66
Query: 253 NLTLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQIM 312
L L YPIE+ +VT WDD+EK+W H F EL V P + PVL+TE LNP+ EK+ ++M
Sbjct: 67 ALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMM 126
Query: 313 SETFNSPSMYIAIQALLSLHVAS 335
ETF+ P Y++ A+ +L+ ++
Sbjct: 127 FETFSVPGFYLSNHAVAALYASA 149
>gi|5031571 actin-related protein 2 isoform b [Homo sapiens]
Length = 394
Score = 111 bits (278), Expect = 9e-25
Identities = 55/141 (39%), Positives = 88/141 (62%), Gaps = 3/141 (2%)
Query: 195 EVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGH--LKHQGVMVGIGQKDSYVGEDAQSKRG 252
+V+V +NG+G K + G N P IFP++VG ++ + I KD VG++A R
Sbjct: 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRS 66
Query: 253 NLTLKYPIEQSIVTNWDDIEKIWHHTFYNE-LHVSPKEHPVLLTEAPLNPKASHEKMTQI 311
L + YP+E IV NWDD++ +W +TF E L++ + +LLTE P+NP + EK+ ++
Sbjct: 67 MLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEV 126
Query: 312 MSETFNSPSMYIAIQALLSLH 332
M ET+ +Y+AIQA+L+L+
Sbjct: 127 MFETYQFSGVYVAIQAVLTLY 147
>gi|221139714 actin related protein M1 [Homo sapiens]
Length = 372
Score = 109 bits (273), Expect = 4e-24
Identities = 52/138 (37%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 197 LVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRGNLTL 256
+V++NGSGM K G P+ I+P+I+G K Q G + VG+ AQ R +L +
Sbjct: 8 VVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQS-RAAQGGLELCVGDQAQDWRSSLFI 66
Query: 257 KYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQIMSETF 316
YP+E+ ++T+W+D+E +W H + L + P + PVL+TE LNP A+ +++T++ E
Sbjct: 67 SYPVERGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHL 126
Query: 317 NSPSMYIAIQALLSLHVA 334
P+ Y++IQA+L+L A
Sbjct: 127 GVPAFYMSIQAVLALFAA 144
>gi|53692187 actin-related protein 2 isoform a [Homo sapiens]
Length = 399
Score = 107 bits (266), Expect = 2e-23
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 8/146 (5%)
Query: 195 EVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGH------LKHQGVMVGIGQK-DSYVGEDA 247
+V+V +NG+G K + G N P IFP++VG K + + +K D VG++A
Sbjct: 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKNNKKMDLMVGDEA 66
Query: 248 QSKRGNLTLKYPIEQSIVTNWDDIEKIWHHTFYNE-LHVSPKEHPVLLTEAPLNPKASHE 306
R L + YP+E IV NWDD++ +W +TF E L++ + +LLTE P+NP + E
Sbjct: 67 SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNRE 126
Query: 307 KMTQIMSETFNSPSMYIAIQALLSLH 332
K+ ++M ET+ +Y+AIQA+L+L+
Sbjct: 127 KIVEVMFETYQFSGVYVAIQAVLTLY 152
>gi|5729720 actin-like 7A [Homo sapiens]
Length = 435
Score = 102 bits (253), Expect = 7e-22
Identities = 45/138 (32%), Positives = 83/138 (60%)
Query: 195 EVLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRGNL 254
+ +VV+ G+G CK F G P + VG + G +K+++VG++ + +L
Sbjct: 70 KAVVVDLGTGYCKCGFAGLPRPTHKISTTVGKPYMETAKTGDNRKETFVGQELNNTNVHL 129
Query: 255 TLKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQIMSE 314
L P+ I+ +WD ++ IW + F E+ ++P+EH VL+++ PL+P + EK +++ E
Sbjct: 130 KLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFE 189
Query: 315 TFNSPSMYIAIQALLSLH 332
FN+P+M+IA Q+ LS++
Sbjct: 190 AFNTPAMHIAYQSRLSMY 207
>gi|194097462 actin-like 9 [Homo sapiens]
Length = 416
Score = 95.9 bits (237), Expect = 5e-20
Identities = 46/137 (33%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Query: 196 VLVVNNGSGMCKVNFVGDNAPRAIFPSIVGHLKHQGVMVGIGQKDSYVGEDAQSKRGNLT 255
V+V++ G+G CKV F G +P +I+G + G +++GE A+ LT
Sbjct: 51 VVVIDMGTGTCKVGFAGQASPTYTVATILGCQPKKPATSGQSGLQTFIGEAARVLP-ELT 109
Query: 256 LKYPIEQSIVTNWDDIEKIWHHTFYNELHVSPKEHPVLLTEAPLNPKASHEKMTQIMSET 315
L P+ IV +WD E IW H ++L V+ +HP+L ++ P +P + EK+ ++ E+
Sbjct: 110 LVQPLRSGIVVDWDAAELIWRHLLEHDLRVATHDHPLLFSDPPFSPATNREKLVEVAFES 169
Query: 316 FNSPSMYIAIQALLSLH 332
SP+MY+A Q++LS++
Sbjct: 170 LRSPAMYVASQSVLSVY 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,672,766
Number of Sequences: 37866
Number of extensions: 702300
Number of successful extensions: 2484
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2381
Number of HSP's gapped (non-prelim): 97
length of query: 378
length of database: 18,247,518
effective HSP length: 104
effective length of query: 274
effective length of database: 14,309,454
effective search space: 3920790396
effective search space used: 3920790396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.