LOC646048 18701

Name: LOC646048	Sequence: fasta or formatted (378aa)		NCBI GI: 239746153
Description: PREDICTED: similar to cytoskeletal beta actin		Referenced in: Actin and Related Proteins
Other entries for this name: alt prot [464aa] PREDICTED: similar to actin alpha 1 skeletal muscle protein alt prot [464aa] PREDICTED: similar to actin alpha 1 skeletal muscle protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 30 2 C cysteine 1.1 4 1 D aspartate 4.5 17 3 E glutamate 4.8 18 1 F phenylalanine 3.7 14 2 G glycine 6.6 25 1 H histidine 3.7 14 2 I isoleucine 5.6 21 1 K lysine 4.8 18 2 L leucine 8.2 31 2 M methionine 2.4 9 1 N asparagine 4.5 17 2 P proline 7.9 30 2 Q glutamine 4.2 16 1 R arginine 4.0 15 2 S serine 9.3 35 2 T threonine 6.3 24 1 V valine 6.6 25 2 W tryptophan 2.1 8 1 Y tyrosine 1.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cytoskeletal beta actin [Homo... LOC646048 0.875 PREDICTED: similar to actin alpha 1 skeletal muscle... LOC646048 0.875 PREDICTED: similar to actin alpha 1 skeletal muscle... ACTB 0.293 beta actin ACTG1 0.287 actin, gamma 1 propeptide ACTBL3 0.283 PREDICTED: actin, beta-like 3 ACTBL3 0.283 PREDICTED: actin, beta-like 3 ACTBL3 0.283 PREDICTED: kappa-actin LOC653269 0.280 PREDICTED: similar to protein expressed in prostate... LOC653269 0.280 PREDICTED: similar to protein expressed in prostate,... LOC653781 0.279 PREDICTED: similar to protein expressed in prostate... POTEE 0.276 protein expressed in prostate, ovary, testis, and p... POTEF 0.276 prostate, ovary, testis expressed protein on chromo... ACTA2 0.273 alpha 2 actin ACTA2 0.273 alpha 2 actin ACTG2 0.272 actin, gamma 2 propeptide ACTA1 0.271 actin, alpha 1, skeletal muscle ACTC1 0.271 cardiac muscle alpha actin 1 proprotein ACTBL2 0.269 actin, beta-like 2 LOC100128069 0.173 PREDICTED: similar to Actin, alpha 1, skeletal musc... LOC100128069 0.169 PREDICTED: similar to alpha actin ACTR1B 0.152 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.148 ARP1 actin-related protein 1 homolog A, centractin al... ACTRT2 0.139 actin-related protein M2 ACTRT1 0.135 actin-related protein T1 ACTR2 0.115 actin-related protein 2 isoform b ARPM1 0.112 actin related protein M1 ACTR2 0.109 actin-related protein 2 isoform a ACTL7A 0.103 actin-like 7A ACTL9 0.095 actin-like 9 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.