LOC100288864 18354

Name: LOC100288864	Sequence: fasta or formatted (492aa)		NCBI GI: 239745312
Description: PREDICTED: hypothetical protein XP_002343435		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 48 3 C cysteine 1.4 7 1 D aspartate 2.4 12 2 E glutamate 4.7 23 2 F phenylalanine 2.2 11 2 G glycine 15.4 76 5 H histidine 1.0 5 1 I isoleucine 1.8 9 2 K lysine 2.6 13 1 L leucine 8.5 42 2 M methionine 0.4 2 1 N asparagine 1.2 6 1 P proline 12.6 62 5 Q glutamine 4.1 20 1 R arginine 11.4 56 4 S serine 9.6 47 3 T threonine 5.5 27 1 V valine 3.9 19 2 W tryptophan 1.4 7 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343435 LOC100290783 1.000 PREDICTED: hypothetical protein XP_002347614 LOC100291843 0.649 PREDICTED: hypothetical protein XP_002344913 COL1A1 0.029 alpha 1 type I collagen preproprotein TAF4 0.028 TBP-associated factor 4 COL3A1 0.027 collagen type III alpha 1 preproprotein COL11A2 0.027 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.027 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.027 collagen, type XI, alpha 2 isoform 1 preproprotein ... AGAP2 0.026 centaurin, gamma 1 isoform PIKE-L COL12A1 0.026 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.026 collagen, type XII, alpha 1 long isoform precursor [... COL2A1 0.025 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.025 collagen, type II, alpha 1 isoform 2 precursor [Hom... BAT2 0.025 HLA-B associated transcript-2 SFPQ 0.025 splicing factor proline/glutamine rich (polypyrimidin... FLJ22184 0.024 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.024 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.024 PREDICTED: hypothetical protein LOC80164 COL4A4 0.023 alpha 4 type IV collagen precursor COL5A3 0.022 collagen, type V, alpha 3 preproprotein MLL 0.021 myeloid/lymphoid or mixed-lineage leukemia protein [... COL11A1 0.021 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.021 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.021 alpha 1 type XI collagen isoform A preproprotein [Ho... CPSF6 0.021 cleavage and polyadenylation specific factor 6, 68 ... LOC100292124 0.021 PREDICTED: hypothetical protein XP_002346387 SYNPO 0.021 synaptopodin isoform A FLJ37078 0.021 hypothetical protein LOC222183 SRRM2 0.021 splicing coactivator subunit SRm300 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.