Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239745181
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745181 PREDICTED: hypothetical protein XP_002343383 [Homo
sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750819 PREDICTED: hypothetical protein XP_002347583 [Homo ... 378 e-105
gi|239745181 PREDICTED: hypothetical protein XP_002343383 [Homo ... 378 e-105
gi|239756344 PREDICTED: hypothetical protein [Homo sapiens] 303 5e-83
gi|126090909 engrailed homeobox 1 [Homo sapiens] 45 3e-05
gi|55750053 atrophin-1 [Homo sapiens] 41 6e-04
gi|55750041 atrophin-1 [Homo sapiens] 41 6e-04
gi|54860105 nadrin isoform 2 [Homo sapiens] 41 6e-04
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 40 8e-04
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 40 8e-04
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 40 8e-04
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 40 8e-04
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 40 8e-04
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 40 8e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 40 8e-04
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 40 8e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 40 8e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 8e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 40 8e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 40 8e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 40 8e-04
gi|153792780 additional sex combs like 2 [Homo sapiens] 40 8e-04
gi|54860079 nadrin isoform 1 [Homo sapiens] 40 0.001
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.001
gi|119943102 CREB binding protein isoform b [Homo sapiens] 40 0.001
gi|119943104 CREB binding protein isoform a [Homo sapiens] 40 0.001
gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] 40 0.001
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 40 0.001
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 39 0.002
>gi|239750819 PREDICTED: hypothetical protein XP_002347583 [Homo
sapiens]
Length = 182
Score = 378 bits (971), Expect = e-105
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ 60
MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ
Sbjct: 1 MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ 60
Query: 61 ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL 120
ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL
Sbjct: 61 ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL 120
Query: 121 KPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPDLGA 180
KPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPDLGA
Sbjct: 121 KPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPDLGA 180
Query: 181 FF 182
FF
Sbjct: 181 FF 182
>gi|239745181 PREDICTED: hypothetical protein XP_002343383 [Homo
sapiens]
Length = 182
Score = 378 bits (971), Expect = e-105
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ 60
MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ
Sbjct: 1 MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ 60
Query: 61 ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL 120
ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL
Sbjct: 61 ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL 120
Query: 121 KPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPDLGA 180
KPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPDLGA
Sbjct: 121 KPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPDLGA 180
Query: 181 FF 182
FF
Sbjct: 181 FF 182
>gi|239756344 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 303 bits (776), Expect = 5e-83
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ 60
MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ
Sbjct: 1 MAAQIMRRSLSEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQ 60
Query: 61 ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL 120
ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL
Sbjct: 61 ILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPL 120
Query: 121 KPQPPGTTPAASSPHLEFSYRNYLRP 146
KPQPPGTTPAASSPHLEFSYRNYLRP
Sbjct: 121 KPQPPGTTPAASSPHLEFSYRNYLRP 146
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 45.4 bits (106), Expect = 3e-05
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 72 EVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPAA 131
E P P +R S+ + + T G L +PGA+G P+ PQP +P A
Sbjct: 3 EQQPEPKSQRDSALGAAAAATPGG-LSLSLSPGASGSSGSGSDGDSVPVSPQPAPPSPPA 61
Query: 132 SSPHLEFSYRNYLRPNPPPAPPPASATPS 160
+ ++ +L P+PPP PP A P+
Sbjct: 62 APCLPPLAHHPHLPPHPPPPPPQHLAAPA 90
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.8 bits (94), Expect = 6e-04
Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 26/139 (18%)
Query: 58 ESQILGVEGDGKPHEV-----SPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPR 112
+ + L +G P ++ S SPS +S GS V +GL + GP P
Sbjct: 109 DGRSLNDDGSSDPRDIDQDNRSTSPSI--YSPGS--VENDSDSSSGL-----SQGPARPY 159
Query: 113 RPKQHSPLKPQPPGTTP----AASSPHLEFSYRNYLRPNPPPA-----PPPASATPS--- 160
P P PQPP +TP A+ PH + Y P PP PP + P
Sbjct: 160 HPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL 219
Query: 161 FPSRVGGASLSPANRPDLG 179
+P GG P P G
Sbjct: 220 YPGGTGGVLSGPPMGPKGG 238
Score = 35.4 bits (80), Expect = 0.027
Identities = 41/152 (26%), Positives = 49/152 (32%), Gaps = 18/152 (11%)
Query: 42 TLGHYEGEEAGPTRAWESQILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTK--TGPTGL 99
T G G GP + +G GK H P+ SSG+ TK T P G
Sbjct: 224 TGGVLSGPPMGPKGGGAASSVGGPNGGKQHP-PPTTPISVSSSGASGAPPTKPPTTPVGG 282
Query: 100 VSTPGAAGP-EFPR-----------RPKQHSPLKPQPPGTTPAAS---SPHLEFSYRNYL 144
+ P A P FP RP ++ P G P SPH L
Sbjct: 283 GNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGL 342
Query: 145 RPNPPPAPPPASATPSFPSRVGGASLSPANRP 176
P P P A + S P A P P
Sbjct: 343 PPGPEKGPTLAPSPHSLPPASSSAPAPPMRFP 374
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 40.8 bits (94), Expect = 6e-04
Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 26/139 (18%)
Query: 58 ESQILGVEGDGKPHEV-----SPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPR 112
+ + L +G P ++ S SPS +S GS V +GL + GP P
Sbjct: 109 DGRSLNDDGSSDPRDIDQDNRSTSPSI--YSPGS--VENDSDSSSGL-----SQGPARPY 159
Query: 113 RPKQHSPLKPQPPGTTP----AASSPHLEFSYRNYLRPNPPPA-----PPPASATPS--- 160
P P PQPP +TP A+ PH + Y P PP PP + P
Sbjct: 160 HPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL 219
Query: 161 FPSRVGGASLSPANRPDLG 179
+P GG P P G
Sbjct: 220 YPGGTGGVLSGPPMGPKGG 238
Score = 35.4 bits (80), Expect = 0.027
Identities = 41/152 (26%), Positives = 49/152 (32%), Gaps = 18/152 (11%)
Query: 42 TLGHYEGEEAGPTRAWESQILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTK--TGPTGL 99
T G G GP + +G GK H P+ SSG+ TK T P G
Sbjct: 224 TGGVLSGPPMGPKGGGAASSVGGPNGGKQHP-PPTTPISVSSSGASGAPPTKPPTTPVGG 282
Query: 100 VSTPGAAGP-EFPR-----------RPKQHSPLKPQPPGTTPAAS---SPHLEFSYRNYL 144
+ P A P FP RP ++ P G P SPH L
Sbjct: 283 GNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGL 342
Query: 145 RPNPPPAPPPASATPSFPSRVGGASLSPANRP 176
P P P A + S P A P P
Sbjct: 343 PPGPEKGPTLAPSPHSLPPASSSAPAPPMRFP 374
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 40.8 bits (94), Expect = 6e-04
Identities = 47/168 (27%), Positives = 62/168 (36%), Gaps = 24/168 (14%)
Query: 13 PRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAG----PTRAWESQILGVEGDG 68
P ++ DL K K + SA + G + A P A S L + G
Sbjct: 482 PASMAVMEGDLVKKESPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSM---G 538
Query: 69 KPHEVS-PSPSCRRHSSGSQSVSKTKTG--PTGLVSTPGAAG-----PEFPRRPKQHSPL 120
+PH + PSP R + + + K G P G ++G P +P SP
Sbjct: 539 QPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPS 598
Query: 121 KP-----QPPGTTPAASSPHLEFSYRNYLRP----NPPPAPPPASATP 159
P QPPG A S Y + L P N PP PP ATP
Sbjct: 599 PPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATP 646
Score = 31.2 bits (69), Expect = 0.51
Identities = 24/96 (25%), Positives = 32/96 (33%), Gaps = 7/96 (7%)
Query: 68 GKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGT 127
G+P S + RR+SS + P P A P +P P P +
Sbjct: 609 GQPSAPSQLSAPRRYSSSLSPIQAPNHPPP---QPPTQATPLMHTKPNSQGPPNPMALPS 665
Query: 128 TPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPS 163
P S+ P PP PP PS P+
Sbjct: 666 EHGLEQP----SHTPPQTPTPPSTPPLGKQNPSLPA 697
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 40.4 bits (93), Expect = 8e-04
Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 57 WESQILGVEGDGKPHEVSPSPSC----------RRHSSGSQSVSKTKTGPTGLVSTPGAA 106
W S G +P +SP+P+ RR S + +G PG A
Sbjct: 77 WISTSSAGTGGAEPPALSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKPGGA 136
Query: 107 GPEFPRRPKQHSPL--KPQPPGTT----PAASSPHLEFSYRNYLRPNPPPAPPPASATPS 160
P RRP SP P+P G P +SSPH R PPPAP P +
Sbjct: 137 -PTSSRRPLLSSPSWGGPEPEGRAGGGIPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTT 195
Query: 161 FPSRVGG 167
++ GG
Sbjct: 196 SGAKAGG 202
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/130 (25%), Positives = 46/130 (35%), Gaps = 14/130 (10%)
Query: 48 GEEAGPTRAWESQILGVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTG-LVSTPGAA 106
G +AG + S++ E +GKP S +S S + + G G ST G
Sbjct: 197 GAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGV 256
Query: 107 GPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVG 166
G R K L P+ + +S L P PP PP P PS
Sbjct: 257 GAGAGARGK----LSPRKGKSKTLDNSD---------LHPGPPAGSPPPLTLPPTPSPAT 303
Query: 167 GASLSPANRP 176
+ + A P
Sbjct: 304 AVTAASAQPP 313
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.4 bits (93), Expect = 8e-04
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 19/121 (15%)
Query: 69 KPHEVSPSPSCRRHSSG-SQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGT 127
+PHE P P H +G ++ + + TGL+ + P R P SP P PP
Sbjct: 274 RPHEPPPPPPM--HGAGDAKPIPTCISSATGLIENRPQS-PATGRTPVFVSPTPPPPPPP 330
Query: 128 TPAASSPHLEFSYRNYLRPNPP-----PAPPPASA-------TPSFPSRVGGASLSPANR 175
P+A S S R + PP P PPPA+A P P ++ L PA
Sbjct: 331 LPSALSTS---SLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPP 387
Query: 176 P 176
P
Sbjct: 388 P 388
Score = 30.4 bits (67), Expect = 0.88
Identities = 33/129 (25%), Positives = 43/129 (33%), Gaps = 25/129 (19%)
Query: 70 PHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLK-------P 122
P P PS SS S++ T P P A + P P +PL+ P
Sbjct: 325 PPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHP 384
Query: 123 QPPGTTP---------AASSPHLEF---------SYRNYLRPNPPPAPPPASATPSFPSR 164
PP P A ++P E + P PPP PP PS P
Sbjct: 385 APPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVT 444
Query: 165 VGGASLSPA 173
V + P+
Sbjct: 445 VTALAHPPS 453
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.4 bits (93), Expect = 8e-04
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 19/121 (15%)
Query: 69 KPHEVSPSPSCRRHSSG-SQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGT 127
+PHE P P H +G ++ + + TGL+ + P R P SP P PP
Sbjct: 274 RPHEPPPPPPM--HGAGDAKPIPTCISSATGLIENRPQS-PATGRTPVFVSPTPPPPPPP 330
Query: 128 TPAASSPHLEFSYRNYLRPNPP-----PAPPPASA-------TPSFPSRVGGASLSPANR 175
P+A S S R + PP P PPPA+A P P ++ L PA
Sbjct: 331 LPSALSTS---SLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPP 387
Query: 176 P 176
P
Sbjct: 388 P 388
Score = 30.4 bits (67), Expect = 0.88
Identities = 33/129 (25%), Positives = 43/129 (33%), Gaps = 25/129 (19%)
Query: 70 PHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLK-------P 122
P P PS SS S++ T P P A + P P +PL+ P
Sbjct: 325 PPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHP 384
Query: 123 QPPGTTP---------AASSPHLEF---------SYRNYLRPNPPPAPPPASATPSFPSR 164
PP P A ++P E + P PPP PP PS P
Sbjct: 385 APPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVT 444
Query: 165 VGGASLSPA 173
V + P+
Sbjct: 445 VTALAHPPS 453
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.4 bits (93), Expect = 8e-04
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 19/121 (15%)
Query: 69 KPHEVSPSPSCRRHSSG-SQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGT 127
+PHE P P H +G ++ + + TGL+ + P R P SP P PP
Sbjct: 274 RPHEPPPPPPM--HGAGDAKPIPTCISSATGLIENRPQS-PATGRTPVFVSPTPPPPPPP 330
Query: 128 TPAASSPHLEFSYRNYLRPNPP-----PAPPPASA-------TPSFPSRVGGASLSPANR 175
P+A S S R + PP P PPPA+A P P ++ L PA
Sbjct: 331 LPSALSTS---SLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPP 387
Query: 176 P 176
P
Sbjct: 388 P 388
Score = 30.4 bits (67), Expect = 0.88
Identities = 33/129 (25%), Positives = 43/129 (33%), Gaps = 25/129 (19%)
Query: 70 PHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLK-------P 122
P P PS SS S++ T P P A + P P +PL+ P
Sbjct: 325 PPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHP 384
Query: 123 QPPGTTP---------AASSPHLEF---------SYRNYLRPNPPPAPPPASATPSFPSR 164
PP P A ++P E + P PPP PP PS P
Sbjct: 385 APPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVT 444
Query: 165 VGGASLSPA 173
V + P+
Sbjct: 445 VTALAHPPS 453
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.4 bits (93), Expect = 8e-04
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 19/121 (15%)
Query: 69 KPHEVSPSPSCRRHSSG-SQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGT 127
+PHE P P H +G ++ + + TGL+ + P R P SP P PP
Sbjct: 274 RPHEPPPPPPM--HGAGDAKPIPTCISSATGLIENRPQS-PATGRTPVFVSPTPPPPPPP 330
Query: 128 TPAASSPHLEFSYRNYLRPNPP-----PAPPPASA-------TPSFPSRVGGASLSPANR 175
P+A S S R + PP P PPPA+A P P ++ L PA
Sbjct: 331 LPSALSTS---SLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPP 387
Query: 176 P 176
P
Sbjct: 388 P 388
Score = 30.4 bits (67), Expect = 0.88
Identities = 33/129 (25%), Positives = 43/129 (33%), Gaps = 25/129 (19%)
Query: 70 PHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLK-------P 122
P P PS SS S++ T P P A + P P +PL+ P
Sbjct: 325 PPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHP 384
Query: 123 QPPGTTP---------AASSPHLEF---------SYRNYLRPNPPPAPPPASATPSFPSR 164
PP P A ++P E + P PPP PP PS P
Sbjct: 385 APPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVT 444
Query: 165 VGGASLSPA 173
V + P+
Sbjct: 445 VTALAHPPS 453
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 40.4 bits (93), Expect = 8e-04
Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 12/150 (8%)
Query: 34 ATTSALLTTLGHYEGEEAGPTRAWESQILGVEGDGKPHEVSPSP---SCRRHSSGSQSVS 90
A+ + T G EG A P A S LGV G H +P P S R G S+
Sbjct: 59 ASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLP 118
Query: 91 KTKTGPTGLV-STPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNP- 148
P+G S GA G R P S L PQPP + AAS+ P P
Sbjct: 119 GPAGRPSGRSRSRVGARG----RLPSGGSHL-PQPPRSLAAASAWQAVARELGLSGPRPT 173
Query: 149 --PPAPPPASATPSFPSRVGGASLSPANRP 176
PP P P P P R L RP
Sbjct: 174 EAPPFPAPRVRAPPPPQRPAQLRLLAGLRP 203
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 40.4 bits (93), Expect = 8e-04
Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
Query: 63 GVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQH---SP 119
G E G PH P R + +T++ P S G P RP QH S
Sbjct: 66 GTEVSGAPH-----PDSRTRPAARPPHPRTRSPPGR--SGSGTTFSAVPPRPSQHQSGSR 118
Query: 120 LKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANR 175
L+P PG P SS R +P PA P A+A + P R P +R
Sbjct: 119 LRPAAPGPRPGCSS----------ARASPAPAAPQAAARTA-PGRAASGGSGPGSR 163
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 40.4 bits (93), Expect = 8e-04
Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
Query: 63 GVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQH---SP 119
G E G PH P R + +T++ P S G P RP QH S
Sbjct: 66 GTEVSGAPH-----PDSRTRPAARPPHPRTRSPPGR--SGSGTTFSAVPPRPSQHQSGSR 118
Query: 120 LKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANR 175
L+P PG P SS R +P PA P A+A + P R P +R
Sbjct: 119 LRPAAPGPRPGCSS----------ARASPAPAAPQAAARTA-PGRAASGGSGPGSR 163
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 40.4 bits (93), Expect = 8e-04
Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
Query: 63 GVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQH---SP 119
G E G PH P R + +T++ P S G P RP QH S
Sbjct: 66 GTEVSGAPH-----PDSRTRPAARPPHPRTRSPPGR--SGSGTTFSAVPPRPSQHQSGSR 118
Query: 120 LKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANR 175
L+P PG P SS R +P PA P A+A + P R P +R
Sbjct: 119 LRPAAPGPRPGCSS----------ARASPAPAAPQAAARTA-PGRAASGGSGPGSR 163
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 40.4 bits (93), Expect = 8e-04
Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
Query: 63 GVEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQH---SP 119
G E G PH P R + +T++ P S G P RP QH S
Sbjct: 66 GTEVSGAPH-----PDSRTRPAARPPHPRTRSPPGR--SGSGTTFSAVPPRPSQHQSGSR 118
Query: 120 LKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANR 175
L+P PG P SS R +P PA P A+A + P R P +R
Sbjct: 119 LRPAAPGPRPGCSS----------ARASPAPAAPQAAARTA-PGRAASGGSGPGSR 163
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.4 bits (93), Expect = 8e-04
Identities = 30/113 (26%), Positives = 37/113 (32%), Gaps = 15/113 (13%)
Query: 82 HSSGSQSVSKTKTGPTGLVSTP---------------GAAGPEFPRRPKQHSPLKPQPPG 126
H + + +VS GP L+ P GAA P P P + P P
Sbjct: 208 HHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPA 267
Query: 127 TTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPDLG 179
P P R P PP PA P+ G A +PA P G
Sbjct: 268 AAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAG 320
Score = 32.7 bits (73), Expect = 0.18
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 103 PGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPA-----PPPASA 157
PG GP+ P P PL P P A P E S P P A P PA A
Sbjct: 97 PGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGS-AGSCAPVPAAAAVAAGPEPAPA 155
Query: 158 TPSFPSRVGGASLSPANRPDLG 179
P+ P+ G A+L+ P G
Sbjct: 156 GPAKPA--GPAALAARAGPGPG 175
Score = 32.0 bits (71), Expect = 0.30
Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 28/149 (18%)
Query: 42 TLGHYEGEEAGPTRAWESQILGVEGDGKPHEVSPSPSCRRHSSGSQSV-SKTKTGPTGLV 100
TL G AGP A P P+ + S+G+ + GP G+
Sbjct: 279 TLARPPGHPAGPPTA------------APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVS 326
Query: 101 STPG----AAGP------EFPRRPKQHSPLKPQP---PGTTPAASSPHLEFSYRNYLRPN 147
PG AA P E P+R Q +P Q G A+S + + + L P+
Sbjct: 327 GQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGAL-PS 385
Query: 148 PPPAPPPASATPS-FPSRVGGASLSPANR 175
P PPPA TP+ P GA +R
Sbjct: 386 PAAVPPPAPGTPTGLPKGAAGAVTQSLSR 414
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 40.4 bits (93), Expect = 8e-04
Identities = 47/184 (25%), Positives = 66/184 (35%), Gaps = 36/184 (19%)
Query: 11 SEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQILGVEGDGKP 70
S RQ + D E+ + T + EGE +S+ + EG P
Sbjct: 92 SNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESS----DSRSVNDEGSSDP 147
Query: 71 HEV-------SPS-PSCRRHSSGSQSVSKTKT---------GPTGLVSTPGAAGPEFPRR 113
++ SPS PS + + S S S ++ + PTG+ P +A P P+
Sbjct: 148 KDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQL 207
Query: 114 PK------------QHSPLKPQPPGT--TPAASSPHLEFSYRNYLRPNPPPAP-PPASAT 158
P Q SP Q P P A PH L P PP+P PP +
Sbjct: 208 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS 267
Query: 159 PSFP 162
P P
Sbjct: 268 PHPP 271
Score = 33.9 bits (76), Expect = 0.079
Identities = 25/102 (24%), Positives = 34/102 (33%), Gaps = 12/102 (11%)
Query: 71 HEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPA 130
H S P + SQ + + P GL + P P + PQPP
Sbjct: 425 HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPP----- 479
Query: 131 ASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSP 172
F+ ++ PPP PP + S P G S P
Sbjct: 480 -------FAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQP 514
Score = 28.5 bits (62), Expect = 3.3
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 20/87 (22%)
Query: 82 HSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQ------PPGTTPAASSPH 135
H G + GP L+ PG P Q L PQ P GT+PAA+ PH
Sbjct: 293 HGQGPPGPHSLQAGP--LLQHPG---------PPQPFGLPPQASQGQAPLGTSPAAAYPH 341
Query: 136 LEF---SYRNYLRPNPPPAPPPASATP 159
+ ++ L+ PP P P
Sbjct: 342 TSLQLPASQSALQSQQPPREQPLPPAP 368
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.4 bits (93), Expect = 8e-04
Identities = 47/184 (25%), Positives = 66/184 (35%), Gaps = 36/184 (19%)
Query: 11 SEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQILGVEGDGKP 70
S RQ + D E+ + T + EGE +S+ + EG P
Sbjct: 646 SNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESS----DSRSVNDEGSSDP 701
Query: 71 HEV-------SPS-PSCRRHSSGSQSVSKTKT---------GPTGLVSTPGAAGPEFPRR 113
++ SPS PS + + S S S ++ + PTG+ P +A P P+
Sbjct: 702 KDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQL 761
Query: 114 PK------------QHSPLKPQPPGT--TPAASSPHLEFSYRNYLRPNPPPAP-PPASAT 158
P Q SP Q P P A PH L P PP+P PP +
Sbjct: 762 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS 821
Query: 159 PSFP 162
P P
Sbjct: 822 PHPP 825
Score = 33.9 bits (76), Expect = 0.079
Identities = 25/102 (24%), Positives = 34/102 (33%), Gaps = 12/102 (11%)
Query: 71 HEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPA 130
H S P + SQ + + P GL + P P + PQPP
Sbjct: 979 HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPP----- 1033
Query: 131 ASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSP 172
F+ ++ PPP PP + S P G S P
Sbjct: 1034 -------FAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQP 1068
Score = 28.5 bits (62), Expect = 3.3
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 20/87 (22%)
Query: 82 HSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQ------PPGTTPAASSPH 135
H G + GP L+ PG P Q L PQ P GT+PAA+ PH
Sbjct: 847 HGQGPPGPHSLQAGP--LLQHPG---------PPQPFGLPPQASQGQAPLGTSPAAAYPH 895
Query: 136 LEF---SYRNYLRPNPPPAPPPASATP 159
+ ++ L+ PP P P
Sbjct: 896 TSLQLPASQSALQSQQPPREQPLPPAP 922
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.4 bits (93), Expect = 8e-04
Identities = 47/184 (25%), Positives = 66/184 (35%), Gaps = 36/184 (19%)
Query: 11 SEPRQWRLLGPDLEKDALAHKVQATTSALLTTLGHYEGEEAGPTRAWESQILGVEGDGKP 70
S RQ + D E+ + T + EGE +S+ + EG P
Sbjct: 646 SNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESS----DSRSVNDEGSSDP 701
Query: 71 HEV-------SPS-PSCRRHSSGSQSVSKTKT---------GPTGLVSTPGAAGPEFPRR 113
++ SPS PS + + S S S ++ + PTG+ P +A P P+
Sbjct: 702 KDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQL 761
Query: 114 PK------------QHSPLKPQPPGT--TPAASSPHLEFSYRNYLRPNPPPAP-PPASAT 158
P Q SP Q P P A PH L P PP+P PP +
Sbjct: 762 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS 821
Query: 159 PSFP 162
P P
Sbjct: 822 PHPP 825
Score = 33.9 bits (76), Expect = 0.079
Identities = 25/102 (24%), Positives = 34/102 (33%), Gaps = 12/102 (11%)
Query: 71 HEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPA 130
H S P + SQ + + P GL + P P + PQPP
Sbjct: 979 HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPP----- 1033
Query: 131 ASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSP 172
F+ ++ PPP PP + S P G S P
Sbjct: 1034 -------FAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQP 1068
Score = 28.5 bits (62), Expect = 3.3
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 20/87 (22%)
Query: 82 HSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQ------PPGTTPAASSPH 135
H G + GP L+ PG P Q L PQ P GT+PAA+ PH
Sbjct: 847 HGQGPPGPHSLQAGP--LLQHPG---------PPQPFGLPPQASQGQAPLGTSPAAAYPH 895
Query: 136 LEF---SYRNYLRPNPPPAPPPASATP 159
+ ++ L+ PP P P
Sbjct: 896 TSLQLPASQSALQSQQPPREQPLPPAP 922
>gi|153792780 additional sex combs like 2 [Homo sapiens]
Length = 1435
Score = 40.4 bits (93), Expect = 8e-04
Identities = 36/135 (26%), Positives = 47/135 (34%), Gaps = 9/135 (6%)
Query: 29 AHKVQATTSALLTTLGHYEGEEAGPTRAWESQILGVEGDGKPHEVSPSPSCRRHSSGSQS 88
A + A +A G GP G G P E + R S GS
Sbjct: 669 AQRAAAAAAAAAAAAASVGGTIPGP---------GPGGGQGPGEGGEGQTARGGSPGSDR 719
Query: 89 VSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNP 148
VS+T GPT ++ G+ G P TTP+ + PH + P
Sbjct: 720 VSETGKGPTLELAGTGSRGGTRELLPCGPETQPQSETKTTPSQAQPHSVSGAQLQQTPPV 779
Query: 149 PPAPPPASATPSFPS 163
PP P + A S PS
Sbjct: 780 PPTPAVSGACTSVPS 794
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 17/109 (15%)
Query: 68 GKPHEVS-PSPSCRRHSSGSQSVSKTKTG--PTGLVSTPGAAG-----PEFPRRPKQHSP 119
G+PH + PSP R + + + K G P G ++G P +P SP
Sbjct: 616 GQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSP 675
Query: 120 LKP-----QPPGTTPAASSPHLEFSYRNYLRP----NPPPAPPPASATP 159
P QPPG A S Y + L P N PP PP ATP
Sbjct: 676 SPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATP 724
Score = 31.2 bits (69), Expect = 0.51
Identities = 24/96 (25%), Positives = 32/96 (33%), Gaps = 7/96 (7%)
Query: 68 GKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGT 127
G+P S + RR+SS + P P A P +P P P +
Sbjct: 687 GQPSAPSQLSAPRRYSSSLSPIQAPNHPPP---QPPTQATPLMHTKPNSQGPPNPMALPS 743
Query: 128 TPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPS 163
P S+ P PP PP PS P+
Sbjct: 744 EHGLEQP----SHTPPQTPTPPSTPPLGKQNPSLPA 775
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 70 PHEVSPSPSCRRHSS--GSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQ---P 124
P PSP + S S VS + T P+ + A + P P P+ P P
Sbjct: 439 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP 498
Query: 125 PGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRP 176
P P ++P L+ + PPP PPA ATP + + P P
Sbjct: 499 PQAPPPLAAPPLQLA-------KPPPQAPPALATPPLQALPSPPASFPGQAP 543
Score = 37.0 bits (84), Expect = 0.009
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 108 PEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPA-SATPSFPSRVG 166
P P P +P +P PG + S P L + L P PPP P + S+T S P G
Sbjct: 575 PSPPASPTLQAPRRPPTPGPDTSVSGPRLTLA----LAPGPPPPPSRSPSSTLSGPDLAG 630
Query: 167 GASLSPANRPDLGAF 181
+S + + +L +
Sbjct: 631 HSSSATSTPEELRGY 645
Score = 32.7 bits (73), Expect = 0.18
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 96 PTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAP--- 152
P+ S PG A P P SPL PP P ++P L+ + P+PP +P
Sbjct: 532 PSPPASFPGQA-PFSPSASLPMSPLATPPPQAPPVLAAPLLQ------VPPSPPASPTLQ 584
Query: 153 -PPASATPSFPSRVGGASLSPANRP 176
P TP + V G L+ A P
Sbjct: 585 APRRPPTPGPDTSVSGPRLTLALAP 609
Score = 31.2 bits (69), Expect = 0.51
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 9/45 (20%)
Query: 118 SPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPAS--ATPS 160
SPL PP PA + P L+ P PPA PP S ATPS
Sbjct: 387 SPLATPPPQAPPALALPPLQ-------APPSPPASPPLSPLATPS 424
Score = 30.4 bits (67), Expect = 0.88
Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 28/156 (17%)
Query: 51 AGPTRAWESQILGVEGDGKPHEVSPSPSCRRHSSGS----QSVSKTKTGPTGLVSTPGAA 106
A P E V + PSP+ RR S + S++ + +S+P +
Sbjct: 196 ARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Query: 107 GPEF---PRRPKQHSPLKPQ------PPGTTP-----------AASSPHLEFSYRNYLRP 146
GP PR P S KP+ PP TP +SSP S L+
Sbjct: 256 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQS 315
Query: 147 NPPP----APPPASATPSFPSRVGGASLSPANRPDL 178
PP P +S T + + A SP+ P L
Sbjct: 316 QAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSL 351
Score = 28.5 bits (62), Expect = 3.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 114 PKQHSPLKPQPPGTTPA---ASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASL 170
P + L+ Q P T PA +SS + + L P P APP PS P+ +
Sbjct: 307 PSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAT 366
Query: 171 SPANRPDLGA 180
+ P L A
Sbjct: 367 TSLGSPTLQA 376
Score = 27.3 bits (59), Expect = 7.4
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 128 TPAASSPHLEFSYRNYLRPNPPPAP-PPASATPSFPSRVGGASLSPANRP 176
TPAA +P L L P PP +P PP TP+ RV GA+ + +P
Sbjct: 16 TPAARAPGL-------LTPRPPGSPRPPPPVTPA-ALRVLGAAGAVGRKP 57
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 70 PHEVSPSPSCRRHSS--GSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQ---P 124
P PSP + S S VS + T P+ + A + P P P+ P P
Sbjct: 400 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP 459
Query: 125 PGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRP 176
P P ++P L+ + PPP PPA ATP + + P P
Sbjct: 460 PQAPPPLAAPPLQLA-------KPPPQAPPALATPPLQALPSPPASFPGQAP 504
Score = 37.0 bits (84), Expect = 0.009
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 108 PEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPA-SATPSFPSRVG 166
P P P +P +P PG + S P L + L P PPP P + S+T S P G
Sbjct: 536 PSPPASPTLQAPRRPPTPGPDTSVSGPRLTLA----LAPGPPPPPSRSPSSTLSGPDLAG 591
Query: 167 GASLSPANRPDLGAF 181
+S + + +L +
Sbjct: 592 HSSSATSTPEELRGY 606
Score = 33.5 bits (75), Expect = 0.10
Identities = 39/146 (26%), Positives = 53/146 (36%), Gaps = 33/146 (22%)
Query: 51 AGPTRAWESQILGVEGDGKPHEVSPSPSCRRHSSGS----QSVSKTKTGPTGLVSTPGAA 106
A P E V + PSP+ RR S + S++ + +S+P +
Sbjct: 187 ARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 246
Query: 107 GPEF---PRRPKQHSPLKPQ------PPGTTPAA--SSPHL-EFSYRNYLRPNP------ 148
GP PR P S KP+ PP TP ++P L S P+P
Sbjct: 247 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSP 306
Query: 149 -----------PPAPPPASATPSFPS 163
PPA PP+ AT S S
Sbjct: 307 SAPPSLQTLPSPPATPPSQATTSLGS 332
Score = 32.7 bits (73), Expect = 0.18
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 96 PTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAP--- 152
P+ S PG A P P SPL PP P ++P L+ + P+PP +P
Sbjct: 493 PSPPASFPGQA-PFSPSASLPMSPLATPPPQAPPVLAAPLLQ------VPPSPPASPTLQ 545
Query: 153 -PPASATPSFPSRVGGASLSPANRP 176
P TP + V G L+ A P
Sbjct: 546 APRRPPTPGPDTSVSGPRLTLALAP 570
Score = 32.3 bits (72), Expect = 0.23
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 18/97 (18%)
Query: 74 SPSPSCRRHSSGSQSVSKTKTGP--------TGLVSTPGAAGPEFPRRPKQHSPLKPQPP 125
+PSPS S S+ + P T L S A F P SPL PP
Sbjct: 297 TPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL-SPLATPPP 355
Query: 126 GTTPAASSPHLEFSYRNYLRPNPPPAPPPAS--ATPS 160
PA + P L+ P PPA PP S ATPS
Sbjct: 356 QAPPALALPPLQ-------APPSPPASPPLSPLATPS 385
Score = 27.3 bits (59), Expect = 7.4
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 128 TPAASSPHLEFSYRNYLRPNPPPAP-PPASATPSFPSRVGGASLSPANRP 176
TPAA +P L L P PP +P PP TP+ RV GA+ + +P
Sbjct: 16 TPAARAPGL-------LTPRPPGSPRPPPPVTPA-ALRVLGAAGAVGRKP 57
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 39.7 bits (91), Expect = 0.001
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 22/109 (20%)
Query: 83 SSGSQSVSKTKTGPTGLVS---TPGAAGP-----------EFPRRPKQHSPLKPQPPGTT 128
SSG+ SV + VS PGAA P + P P SPL P PP +
Sbjct: 764 SSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPAS 823
Query: 129 PAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSR-VGGASLSPANRP 176
AA P L+ + PP PP A P+ PS V + +P P
Sbjct: 824 TAAGMPSLQHT-------TPPGMTPPQPAAPTQPSTPVSSSGQTPTPTP 865
Score = 30.8 bits (68), Expect = 0.67
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 96 PTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPA 155
P+ + A G + +P+ + L+PQ PG PA H + N L NP P
Sbjct: 440 PSSMQRAYAALGLPYMNQPQ--TQLQPQVPGQQPAQPQTHQQMRTLNPLGNNPMNIPAGG 497
Query: 156 SATPSFPSRVGGASLSPAN 174
T P + S P +
Sbjct: 498 ITTDQQPPNLISESALPTS 516
Score = 28.9 bits (63), Expect = 2.6
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 19/83 (22%)
Query: 92 TKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPG---TTPAASSPHLEFSYRNYLRPNP 148
T+ P + +P +A P P + + +P PQPP +P + SP + + R P
Sbjct: 1836 TRNVPQQSLPSPTSAPPGTPTQ-QPSTPQTPQPPAQPQPSPVSMSP---AGFPSVARTQP 1891
Query: 149 P------------PAPPPASATP 159
P PAPPP + P
Sbjct: 1892 PTTVSTGKPTSQVPAPPPPAQPP 1914
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 39.7 bits (91), Expect = 0.001
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 22/109 (20%)
Query: 83 SSGSQSVSKTKTGPTGLVS---TPGAAGP-----------EFPRRPKQHSPLKPQPPGTT 128
SSG+ SV + VS PGAA P + P P SPL P PP +
Sbjct: 802 SSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPAS 861
Query: 129 PAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSR-VGGASLSPANRP 176
AA P L+ + PP PP A P+ PS V + +P P
Sbjct: 862 TAAGMPSLQHT-------TPPGMTPPQPAAPTQPSTPVSSSGQTPTPTP 903
Score = 30.8 bits (68), Expect = 0.67
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 96 PTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPA 155
P+ + A G + +P+ + L+PQ PG PA H + N L NP P
Sbjct: 478 PSSMQRAYAALGLPYMNQPQ--TQLQPQVPGQQPAQPQTHQQMRTLNPLGNNPMNIPAGG 535
Query: 156 SATPSFPSRVGGASLSPAN 174
T P + S P +
Sbjct: 536 ITTDQQPPNLISESALPTS 554
Score = 28.9 bits (63), Expect = 2.6
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 19/83 (22%)
Query: 92 TKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPG---TTPAASSPHLEFSYRNYLRPNP 148
T+ P + +P +A P P + + +P PQPP +P + SP + + R P
Sbjct: 1874 TRNVPQQSLPSPTSAPPGTPTQ-QPSTPQTPQPPAQPQPSPVSMSP---AGFPSVARTQP 1929
Query: 149 P------------PAPPPASATP 159
P PAPPP + P
Sbjct: 1930 PTTVSTGKPTSQVPAPPPPAQPP 1952
>gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens]
Length = 981
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 64 VEGDGKPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQ 123
VE G P + P PS +V++T++ P G + A E+P RP+ H P
Sbjct: 358 VEAPGTPKSLIPGPS-----DPGPAVNRTES-PMGALQPDEAE--EWPGRPQSH---PPA 406
Query: 124 PPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPAN 174
PP P+ S L PPP P AS+ S P AS PAN
Sbjct: 407 PPVQAPSTSRRGLIRVTTQRALGQPPPPEPTASSMASAP-----ASSPPAN 452
Score = 29.6 bits (65), Expect = 1.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 109 EFPRRPKQHSPLKPQPPGTTPA-ASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGG 167
E P+R + PG P A P + S P P P PPAS P PS+
Sbjct: 287 ETPKRAGAEVSWEVSSPGPPPKQADLPDAKDS------PGPQPTDPPASEAPDRPSKPER 340
Query: 168 ASLSPAN 174
A+++ A+
Sbjct: 341 AAMNGAD 347
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 39.7 bits (91), Expect = 0.001
Identities = 55/179 (30%), Positives = 71/179 (39%), Gaps = 44/179 (24%)
Query: 19 LGPDLEKDALA---HKVQATTSALL-----TTLGHYE-GEEAGPTRAWESQILGVEGDGK 69
+GP E+D H+ +A A L TT H GE A P Q+ G
Sbjct: 89 VGPASEEDMTKLCNHRRKAVAMATLYRSMETTCSHSSPGEGASP------QMFHTVSPGP 142
Query: 70 PHEVSPSPSCR-------RHSSGS-----QSVSK---TKTGPTGL--------VSTPGAA 106
P S P CR GS SVS+ T GP GL V + G++
Sbjct: 143 P---SARPPCRVPPTTPLNGGPGSLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSS 199
Query: 107 GPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPN---PPPAPPPASATPSFP 162
P F R SP P PP + A S + + R+ L P+ PPAP +S+ PS P
Sbjct: 200 SPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDP 258
Score = 32.0 bits (71), Expect = 0.30
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 69 KPHEVSPSPSCRRHSSGSQSVSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTT 128
+P +PS S HSS + + P + GP+ PRR + +P P +
Sbjct: 345 RPRAQAPSAS---HSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSL 401
Query: 129 PAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSP 172
P S P L + L P P P+ + SF A L P
Sbjct: 402 PEPSQPILP----SVLSLLGLPTPGPSHSDGSFNLLGSDAHLPP 441
Score = 28.5 bits (62), Expect = 3.3
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 127 TTPAASSPHLEFSYRNY--LRPNPPPAPPPASATPSFPSRVGGASLSP 172
TT + SSP S + + + P PP A PP P+ P G SL P
Sbjct: 119 TTCSHSSPGEGASPQMFHTVSPGPPSARPPCRVPPTTPLNGGPGSLPP 166
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 39.3 bits (90), Expect = 0.002
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 27/94 (28%)
Query: 89 VSKTKTGPTGLVSTPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNP 148
V++ GP L S P RRP PPG PAA+SP P P
Sbjct: 742 VARPLVGPLALGS------PRLVRRP---------PPGPAPAAASPG----------PPP 776
Query: 149 PPAPPPASATPSFP--SRVGGASLSPANRPDLGA 180
P +PP A A+P P S GG +P P L A
Sbjct: 777 PASPPGAPASPRAPRTSPYGGLPAAPLAGPALPA 810
Score = 32.3 bits (72), Expect = 0.23
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 102 TPGAAGPEFPRRPKQHSPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSF 161
+PGA P P +P + QPP P A P P PP PP A A P
Sbjct: 13 SPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPG--------PGPAPPQHPPRAEALPPE 64
Query: 162 PSRVGG 167
+ GG
Sbjct: 65 AADEGG 70
Score = 28.9 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 11/62 (17%)
Query: 118 SPLKPQPPGTTPAASSPHLEFSYRNYLRPNPPPAPPPASATPSFPSRVGGASLSPANRPD 177
+P P PP P P P PPP PP P+ P A P D
Sbjct: 19 APGPPPPPPPAPPQQQP-----------PPPPPPAPPPGPGPAPPQHPPRAEALPPEAAD 67
Query: 178 LG 179
G
Sbjct: 68 EG 69
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,525,218
Number of Sequences: 37866
Number of extensions: 705742
Number of successful extensions: 10738
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 1133
Number of HSP's that attempted gapping in prelim test: 5745
Number of HSP's gapped (non-prelim): 4500
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.