Guide to the Human Genome
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Name: ASXL2 Sequence: fasta or formatted (1435aa) NCBI GI: 153792780
Description:

additional sex combs like 2

Referenced in:

Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        102          13
 C cysteine            1.6         23           1
 D aspartate           3.1         45           2
 E glutamate           7.0        100           2
 F phenylalanine       2.0         28           2
 G glycine             6.8         97           3
 H histidine           1.8         26           1
 I isoleucine          3.1         45           1
 K lysine              7.1        102           2
 L leucine             7.7        111           5
 M methionine          1.7         25           1
 N asparagine          3.3         48           2
 P proline             8.9        128           2
 Q glutamine           6.7         96           4
 R arginine            4.6         66           2
 S serine             13.0        186           5
 T threonine           7.4        106           2
 V valine              5.6         81           2
 W tryptophan          0.4          6           1
 Y tyrosine            1.0         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   additional sex combs like 2 
ASXL1                 0.127   additional sex combs like 1 
ASXL3                 0.118   additional sex combs like 3 
PRG4                  0.025   proteoglycan 4 isoform D 
PRG4                  0.025   proteoglycan 4 isoform C 
PRG4                  0.025   proteoglycan 4 isoform B 
PRG4                  0.025   proteoglycan 4 isoform A 
MUC17                 0.021   mucin 17 
TAF4                  0.018   TBP-associated factor 4 
LOC100133756          0.017   PREDICTED: hypothetical protein, partial 
MUC6                  0.017   mucin 6, gastric 
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform a ...
YEATS2                0.015   YEATS domain containing 2 
SRCAP                 0.015   Snf2-related CBP activator protein 
MUC2                  0.014   mucin 2 precursor 
TCOF1                 0.014   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.014   Treacher Collins-Franceschetti syndrome 1 isoform b ...
MUC7                  0.014   mucin 7, secreted precursor 
FLJ22184              0.014   PREDICTED: hypothetical protein LOC80164 
MUC7                  0.014   mucin 7, secreted precursor 
MUC7                  0.014   mucin 7, secreted precursor 
NACA                  0.013   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform c ...
DACH1                 0.012   dachshund homolog 1 isoform b 
DACH1                 0.012   dachshund homolog 1 isoform a 
DACH1                 0.012   dachshund homolog 1 isoform c 
MUC5B                 0.012   mucin 5, subtype B, tracheobronchial 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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