Search of human proteins with 239744876

Search of human proteins with 239744876

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo
sapiens]
         (205 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo ...   432   e-122
gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo ...   432   e-122
gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo ...   432   e-122
gi|38490568 keratin associated protein 10-4 [Homo sapiens]             37   0.009
gi|239754902 PREDICTED: hypothetical protein [Homo sapiens]            33   0.13 
gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo ...    33   0.13 
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              32   0.38 
gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2...    31   0.64 
gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1...    31   0.64 
gi|225690551 keratin associated protein 4-9 [Homo sapiens]             31   0.64 
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]      31   0.84 
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]      30   1.1  
gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens]      30   1.1  
gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens]     30   1.1  
gi|154146260 keratin associated protein 4-3 [Homo sapiens]             30   1.4  
gi|167621456 kinase suppressor of ras 2 [Homo sapiens]                 30   1.4  
gi|118572608 keratin associated protein 4-5 [Homo sapiens]             30   1.4  
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]      30   1.9  
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ...    30   1.9  
gi|8923271 coiled-coil domain containing 49 [Homo sapiens]             30   1.9  
gi|4885135 cerberus 1 [Homo sapiens]                                   29   2.4  
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma...    29   2.4  
gi|239755004 PREDICTED: hypothetical protein [Homo sapiens]            29   2.4  
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma...    29   2.4  
gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo ...    29   2.4  
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma...    29   2.4  
gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo ...    29   2.4  
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    29   2.4  
gi|14210534 keratin associated protein 4.4 [Homo sapiens]              29   2.4  
gi|13994129 keratin associated protein 4-12 [Homo sapiens]             29   2.4  

>gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo
           sapiens]
          Length = 205

 Score =  432 bits (1112), Expect = e-122
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60
           MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS
Sbjct: 1   MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60

Query: 61  PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120
           PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT
Sbjct: 61  PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120

Query: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180
           KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS
Sbjct: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180

Query: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205
           HSRGSSTLPRRPPHQSFPRERRWGL
Sbjct: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205


>gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo
           sapiens]
          Length = 205

 Score =  432 bits (1112), Expect = e-122
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60
           MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS
Sbjct: 1   MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60

Query: 61  PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120
           PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT
Sbjct: 61  PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120

Query: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180
           KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS
Sbjct: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180

Query: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205
           HSRGSSTLPRRPPHQSFPRERRWGL
Sbjct: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205


>gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo
           sapiens]
          Length = 205

 Score =  432 bits (1112), Expect = e-122
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60
           MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS
Sbjct: 1   MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60

Query: 61  PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120
           PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT
Sbjct: 61  PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQRNSNSFKKLFKVRDDGT 120

Query: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180
           KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS
Sbjct: 121 KHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENS 180

Query: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205
           HSRGSSTLPRRPPHQSFPRERRWGL
Sbjct: 181 HSRGSSTLPRRPPHQSFPRERRWGL 205


>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
          Length = 401

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 18  GDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS--PVASGMASANCRTFC 75
           G VP    A +L     + +P    S  S +GC    CC+  S  PV SG +S+ C    
Sbjct: 285 GSVPICSGASSLCCQQSSCQPACCTSSQSQQGCCVPVCCKPVSCVPVCSGASSSCC---- 340

Query: 76  RNRTSSSTTPCKVASLPSPETTYLLICQ 103
             + SS    C   S   P ++  L+C+
Sbjct: 341 --QQSSCQPACCTTSCCRPSSSVSLLCR 366


>gi|239754902 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 16/103 (15%)

Query: 3   GPLMAPRPVDLPGSWGDVP-------DLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSC 55
           G   +P P+  P SW  +P         GA L    +PWA  P  +V      GC + S 
Sbjct: 13  GICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWAC-PCGKVRTVMLTGCPAWSP 71

Query: 56  CRRASPV------ASGMASANCRTFCRNRTSSSTTPCKVASLP 92
            +  S +      +SG   A   +FC   T   T  C+   LP
Sbjct: 72  LKTQSEIRGCTHHSSGAGPAGTGSFC--DTCRITRLCEQTQLP 112


>gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo
           sapiens]
          Length = 269

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 16/103 (15%)

Query: 3   GPLMAPRPVDLPGSWGDVP-------DLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSC 55
           G   +P P+  P SW  +P         GA L    +PWA  P  +V      GC + S 
Sbjct: 13  GICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWAC-PCGKVRTVMLTGCPAWSP 71

Query: 56  CRRASPV------ASGMASANCRTFCRNRTSSSTTPCKVASLP 92
            +  S +      +SG   A   +FC   T   T  C+   LP
Sbjct: 72  LKTQSEIRGCTHHSSGAGPAGTGSFC--DTCRITRLCEQTQLP 112


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 160 CQGRLHGPLGAGEPEGRGENSHSRGSSTLPRRP 192
           C  RL G  G G+P GRG  + S  SS +PR P
Sbjct: 709 CISRLTGREGTGQP-GRGTRAESEASSRVPREP 740


>gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2
           [Homo sapiens]
          Length = 195

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 33  PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92
           P   RP   +S      C   SCCR    V       +C T C   T      C ++S P
Sbjct: 132 PNCCRPSCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISSCP 185

Query: 93  SP 94
            P
Sbjct: 186 RP 187



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 50  CLSRSCCRRASPVASGMASANCRTFCRNRTSSSTT----PCKVASLPSPETTYLLICQ 103
           C   +CCR      S   S+ CR  C   T   TT     C V+S   P+    + CQ
Sbjct: 29  CCETTCCRTTCCRPSCCVSSCCRPHCCQTTCCRTTCYRPSCCVSSCCRPQCCQPVCCQ 86


>gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1
           [Homo sapiens]
          Length = 210

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 33  PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92
           P   RP   +S      C   SCCR    V       +C T C   T      C ++S P
Sbjct: 147 PNCCRPSCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISSCP 200

Query: 93  SP 94
            P
Sbjct: 201 RP 202


>gi|225690551 keratin associated protein 4-9 [Homo sapiens]
          Length = 210

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 33  PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92
           P   RP   +S      C   SCCR    V       +C T C   T      C ++S P
Sbjct: 147 PNCCRPSCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISSCP 200

Query: 93  SP 94
            P
Sbjct: 201 RP 202


>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
          Length = 517

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 54  SCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103
           SCC+   P  +   +++C+  C + +    T C  +S+  P T   L+C+
Sbjct: 227 SCCQPVCPTPTCSVTSSCQAVCCDPSPCEPT-CSESSICQPATCVALVCE 275



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 50  CLSRSCCRRASPVASGMASANCRTFCRNRTSS-----STTPCKV 88
           C++   CR      S   S +C+  C+  TSS      TTPCKV
Sbjct: 438 CVTSYSCRPVYFRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKV 481


>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 632

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 48/200 (24%), Positives = 76/200 (38%), Gaps = 29/200 (14%)

Query: 1   MSGPLMAPRPVDLPGSWGDVPDLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSCCRRAS 60
           ++G  +  RP+D    W D P L A        +A  P   +   S + C      R   
Sbjct: 259 VTGQAVVSRPLDAGWPWMDGPPLQAV-------FAPAPNHTLQRPSEQTCPQDLHTR--- 308

Query: 61  PVASGMASANCRTFCRNRTSSSTTPCKVASLPSPE---TTYLLICQRNSNSFKKLFKVRD 117
               G  S+      R   SS   P    SL  P+   T   L C ++ ++   L   +D
Sbjct: 309 ----GSLSSPQDPHTRGSLSSPKDPHTRGSLSCPQDPHTRGSLSCPQDPHTRGSLSSPQD 364

Query: 118 DGTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRG 177
             T+ S +S    + +G   LS P     +  ++ P       +G L  P    +P  RG
Sbjct: 365 PHTRGSLSSPQDPHTRG--SLSSPQDPHTRGSLSSPKDPH--TRGSLSSP---QDPHTRG 417

Query: 178 -----ENSHSRGSSTLPRRP 192
                ++ H+RGS + P+ P
Sbjct: 418 SLSSPKDPHTRGSLSSPQDP 437


>gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens]
          Length = 1243

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 9/60 (15%)

Query: 132 LQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENSHSRGSSTLPRR 191
           L G  +  I VV  A + I  PG  KI+       P+ AG PE    NS +  +  +PRR
Sbjct: 192 LSGAKKPIISVVLTAHEAI--PGATKIV-------PVEAGPPETGATNSETTSADLVPRR 242


>gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens]
          Length = 846

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 9/60 (15%)

Query: 132 LQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGENSHSRGSSTLPRR 191
           L G  +  I VV  A + I  PG  KI+       P+ AG PE    NS +  +  +PRR
Sbjct: 180 LSGAKKPIISVVLTAHEAI--PGATKIV-------PVEAGPPETGATNSETTSADLVPRR 230


>gi|154146260 keratin associated protein 4-3 [Homo sapiens]
          Length = 195

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 37  RPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCK 87
           RP   +S      C   SCCR A  ++S    + C + CR   S  TT C+
Sbjct: 131 RPSCCISSCYRPQCCQPSCCRPACCISSCCHPSCCVSSCRCPFSCPTTCCR 181



 Score = 28.1 bits (61), Expect = 5.5
 Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 11/128 (8%)

Query: 37  RPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPET 96
           RP   +S      C   +CCR +  ++S    + C + C   +   TT C+ +   S   
Sbjct: 51  RPSCCISSCCKPSCCRTTCCRPSCCISSCCRPSCCISSCCKPSCCRTTCCRPSCCISS-- 108

Query: 97  TYLLICQRNSNSFKKLFKVRDDGTKHSRTSRPFSYLQGRPELSIPVVCKAQDGIN---HP 153
                C R S       K     T   R S   S    RP+   P  C+    I+   HP
Sbjct: 109 -----CCRPSCCISSCCKPSCCQTTCCRPSCCISSCY-RPQCCQPSCCRPACCISSCCHP 162

Query: 154 GCVKIICQ 161
            C    C+
Sbjct: 163 SCCVSSCR 170


>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
          Length = 921

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 25  AALTLMLMPWAVR-PRRRVSHA-----SSRGCLSRSCCRRASPVASGMASANCRTFCRNR 78
           +A TL +  W+ + PRR + ++     S++  +S++C      +  G+   NC+  C N+
Sbjct: 360 SANTLSVPRWSPQIPRRDLGNSIKHRFSTKYWMSQTCTVCGKGMLFGLKCKNCKLKCHNK 419

Query: 79  TSSSTTPC 86
            +    PC
Sbjct: 420 CTKEAPPC 427


>gi|118572608 keratin associated protein 4-5 [Homo sapiens]
          Length = 181

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 33  PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92
           P   RP   +S      C   SCCR    V       +C T C   T      C +++ P
Sbjct: 118 PTCCRPSCCISSCCHPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPT------CVISTCP 171

Query: 93  SP 94
            P
Sbjct: 172 RP 173



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 50  CLSRSCCRRASPVASGMASANCRTFCRNRTSSSTT----PCKVASLPSPETTYLLICQ 103
           C   SCCR     +S      C+T C   T   TT     C V+S   P+    + CQ
Sbjct: 60  CCISSCCRPYCCESSCCRPCCCQTTCCRTTCCRTTCCCPSCCVSSCCRPQCCQSVCCQ 117


>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
          Length = 517

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 54  SCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103
           SCC+   P  +   +++C+  C +  S     C  +S+  P T   L+C+
Sbjct: 227 SCCQPVCPTPTCSVTSSCQAVCCD-PSPCEPSCSESSICQPATCVALVCE 275



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 50  CLSRSCCRRASPVASGMASANCRTFCRNRTSS-----STTPCKV 88
           C++   CR      S   S +C+  C+  TSS      TTPCKV
Sbjct: 438 CVTSYSCRPVYFRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKV 481


>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
           sapiens]
          Length = 517

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 54  SCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103
           SCC+   P  +   +++C+  C +  S     C  +S+  P T   L+C+
Sbjct: 227 SCCQPVCPTPTCSVTSSCQAVCCD-PSPCEPSCSESSICQPATCVALVCE 275



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 50  CLSRSCCRRASPVASGMASANCRTFCRNRTSS-----STTPCKV 88
           C++   CR      S   S +C+  C+  TSS      TTPCKV
Sbjct: 438 CVTSYSCRPVYFRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKV 481


>gi|8923271 coiled-coil domain containing 49 [Homo sapiens]
          Length = 425

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 164 LHGPLGAGEPEGRGENSHSRGSSTLPRRPPHQSFPRERRWG 204
           L GPL A +  G G  +HSR  S+    P H S    R  G
Sbjct: 240 LQGPLTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAG 280


>gi|4885135 cerberus 1 [Homo sapiens]
          Length = 267

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 150 INHPGCVKIICQGRL-HGPLGAGEPEGRGENSHSRGSSTLPRR 191
           I H GC K++ Q  L  G  G+    G  ++SH+  S  LP +
Sbjct: 171 ITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAK 213


>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 13/82 (15%)

Query: 119  GTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGE 178
            G+KHSR   P      RP  + P     +    HP       +  L GP+ +  PEG   
Sbjct: 2805 GSKHSR---PIPLPDQRPSAN-PGGIGEEAPCRHP-------REALDGPVFSRNPEGSRT 2853

Query: 179  NSHSRG--SSTLPRRPPHQSFP 198
             S SRG  S TLP R P  S P
Sbjct: 2854 LSPSRGKESRTLPCRQPCSSQP 2875


>gi|239755004 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 558

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 165 HGPLGAGEPEGRGENSHSRGSSTL---PRRPP--HQSFPRERR 202
           HGPL  G   G  +     G   L   PR PP  H++ PR RR
Sbjct: 407 HGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRR 449


>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 13/82 (15%)

Query: 119  GTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGE 178
            G+KHSR   P      RP  + P     +    HP       +  L GP+ +  PEG   
Sbjct: 2805 GSKHSR---PIPLPDQRPSAN-PGGIGEEAPCRHP-------REALDGPVFSRNPEGSRT 2853

Query: 179  NSHSRG--SSTLPRRPPHQSFP 198
             S SRG  S TLP R P  S P
Sbjct: 2854 LSPSRGKESRTLPCRQPCSSQP 2875


>gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo
           sapiens]
          Length = 443

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 165 HGPLGAGEPEGRGENSHSRGSSTL---PRRPP--HQSFPRERR 202
           HGPL  G   G  +     G   L   PR PP  H++ PR RR
Sbjct: 371 HGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRR 413


>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 13/82 (15%)

Query: 119  GTKHSRTSRPFSYLQGRPELSIPVVCKAQDGINHPGCVKIICQGRLHGPLGAGEPEGRGE 178
            G+KHSR   P      RP  + P     +    HP       +  L GP+ +  PEG   
Sbjct: 2805 GSKHSR---PIPLPDQRPSAN-PGGIGEEAPCRHP-------REALDGPVFSRNPEGSRT 2853

Query: 179  NSHSRG--SSTLPRRPPHQSFP 198
             S SRG  S TLP R P  S P
Sbjct: 2854 LSPSRGKESRTLPCRQPCSSQP 2875


>gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo
           sapiens]
          Length = 522

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 165 HGPLGAGEPEGRGENSHSRGSSTL---PRRPP--HQSFPRERR 202
           HGPL  G   G  +     G   L   PR PP  H++ PR RR
Sbjct: 371 HGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRR 413


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
           sapiens]
          Length = 2365

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 14/107 (13%)

Query: 33  PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92
           P A  P R     +SR     SC +R +P AS  +S N  T    RTS +      AS P
Sbjct: 388 PRASSPNRTTQRENSR----TSCAQRDNPKASRTSSPNRATRDNPRTSCAQRDNPRASSP 443

Query: 93  SPETTYLLICQRNSNSFKKLFKVRDDGTKHSRTSRPFSYLQGRPELS 139
           S          R +         + D  + SRTS P    +  P  S
Sbjct: 444 S----------RATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTS 480



 Score = 27.3 bits (59), Expect = 9.3
 Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 10/102 (9%)

Query: 38  PRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETT 97
           PR      ++R   + SC +R +P AS  +S N  T    RTS +      AS PS    
Sbjct: 438 PRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPS---- 493

Query: 98  YLLICQRNSNSFKKLFKVRDDGTKHSRTSRPFSYLQGRPELS 139
                 R +         + D  + SRTS P    +  P  S
Sbjct: 494 ------RATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTS 529


>gi|14210534 keratin associated protein 4.4 [Homo sapiens]
          Length = 166

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 50  CLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLPSPETTYLLICQ 103
           C   +CCR +  V+S      C+T C  RT+     C V+S   P+    + CQ
Sbjct: 30  CCRTTCCRPSCCVSSCCRPQCCQTTC-CRTTCCHPSCCVSSCCRPQCCQSVCCQ 82


>gi|13994129 keratin associated protein 4-12 [Homo sapiens]
          Length = 201

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 33  PWAVRPRRRVSHASSRGCLSRSCCRRASPVASGMASANCRTFCRNRTSSSTTPCKVASLP 92
           P   RP   +S +    C   SCCR    +       +C T C   T      C +++ P
Sbjct: 138 PTCCRPSCCISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT------CVISTCP 191

Query: 93  SP 94
            P
Sbjct: 192 RP 193


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,916,897
Number of Sequences: 37866
Number of extensions: 515201
Number of successful extensions: 1958
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1808
Number of HSP's gapped (non-prelim): 196
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.