BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239742678 PREDICTED: hypothetical protein XP_002342581 [Homo sapiens] (295 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239748653 PREDICTED: hypothetical protein [Homo sapiens] 600 e-172 gi|239742678 PREDICTED: hypothetical protein XP_002342581 [Homo ... 600 e-172 gi|239754096 PREDICTED: hypothetical protein XP_002345879 [Homo ... 593 e-170 gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 39 0.007 gi|31044432 LEM domain containing 2 isoform 1 [Homo sapiens] 39 0.007 gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens] 38 0.009 gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens] 38 0.009 gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 38 0.012 gi|28875797 small protein rich in arginine and glycine [Homo sap... 37 0.016 gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 37 0.016 gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap... 36 0.035 gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 36 0.046 gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 36 0.046 gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 35 0.060 gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ... 34 0.13 gi|169208488 PREDICTED: hypothetical protein [Homo sapiens] 34 0.13 gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 34 0.13 gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] 34 0.18 gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ... 34 0.18 gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 34 0.18 gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 34 0.18 gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 33 0.23 gi|124378039 SEC16 homolog A [Homo sapiens] 33 0.23 gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23 gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 33 0.23 gi|6912446 potassium voltage-gated channel, subfamily H, member ... 33 0.30 gi|239756566 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30 gi|20336196 A-kinase anchor protein 7 isoform beta [Homo sapiens] 33 0.30 gi|51242137 transmembrane protein 200B [Homo sapiens] 33 0.30 gi|223278356 glutamate receptor, ionotropic, N-methyl-D-aspartat... 33 0.39 >gi|239748653 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 600 bits (1547), Expect = e-172 Identities = 295/295 (100%), Positives = 295/295 (100%) Query: 1 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR 60 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR Sbjct: 1 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR 60 Query: 61 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSF 120 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSF Sbjct: 61 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSF 120 Query: 121 KDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDS 180 KDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDS Sbjct: 121 KDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDS 180 Query: 181 GPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQ 240 GPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQ Sbjct: 181 GPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQ 240 Query: 241 RGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV 295 RGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV Sbjct: 241 RGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV 295 >gi|239742678 PREDICTED: hypothetical protein XP_002342581 [Homo sapiens] Length = 295 Score = 600 bits (1547), Expect = e-172 Identities = 295/295 (100%), Positives = 295/295 (100%) Query: 1 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR 60 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR Sbjct: 1 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR 60 Query: 61 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSF 120 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSF Sbjct: 61 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSF 120 Query: 121 KDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDS 180 KDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDS Sbjct: 121 KDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDS 180 Query: 181 GPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQ 240 GPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQ Sbjct: 181 GPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQ 240 Query: 241 RGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV 295 RGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV Sbjct: 241 RGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV 295 >gi|239754096 PREDICTED: hypothetical protein XP_002345879 [Homo sapiens] Length = 297 Score = 593 bits (1530), Expect = e-170 Identities = 294/297 (98%), Positives = 295/297 (99%), Gaps = 2/297 (0%) Query: 1 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR 60 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR Sbjct: 1 MAKVVPDGVQLVLKEADALVQVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKR 60 Query: 61 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIR--EPKTSPEALRLRLAGLKASP 118 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIR EPKTSPEALRLRLAGLKASP Sbjct: 61 RREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIRVAEPKTSPEALRLRLAGLKASP 120 Query: 119 SFKDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRW 178 SFKDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRW Sbjct: 121 SFKDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRW 180 Query: 179 DSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRV 238 DSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRV Sbjct: 181 DSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRV 240 Query: 239 QQRGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV 295 QQRGGLPVQWS+GPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV Sbjct: 241 QQRGGLPVQWSQGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHVVPV 297 >gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo sapiens] Length = 944 Score = 38.5 bits (88), Expect = 0.007 Identities = 66/234 (28%), Positives = 81/234 (34%), Gaps = 57/234 (24%) Query: 65 GEGAAAPGMVPAGDSRPLT-----------ALLACNLNPFYLLIREPKTSPEALRLRLAG 113 GE A A G P PL A LA + P ++ + P L G Sbjct: 455 GEAALATGEGPQARVHPLVDGQQGGALEGLAALATLVGPLARVVPQVVAQPGGA---LEG 511 Query: 114 LKASPSFKDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARR-----------LPLPAR 162 L A +F P R + G WR G RR L L R Sbjct: 512 LAALGTFVGPLRR---------------SGGGRGWRRDGGGRRQRFLGAGHLRSLSLRGR 556 Query: 163 VAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVGG-----PR 217 RG V+ R ++G G A A RLP SP+ L V G P Sbjct: 557 APGRGLFHVALL-MRQEAGQLREGAVAA---AAAERLPAGSPVAVL----VAGEPSHRPE 608 Query: 218 GRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWSRGPRDLCWLRPTAGCNRGPGPR 271 G AG+ G RRG GR+ ++QRG +W G L G GPG R Sbjct: 609 GLAAGQTGKARRGGGGGRRGLRQRG----RWLVGLGRLGGCLLGLGRRIGPGAR 658 Score = 29.6 bits (65), Expect = 3.3 Identities = 46/167 (27%), Positives = 60/167 (35%), Gaps = 31/167 (18%) Query: 141 GTPAGSSWRGSPGARRLPLPA------RVAERGGARVSRRGPRWDSGPQTGGQAHAELLA 194 G+P G P R L A R GG R R+ RW G G+ LL Sbjct: 592 GSPVAVLVAGEPSHRPEGLAAGQTGKARRGGGGGRRGLRQRGRWLVGL---GRLGGCLLG 648 Query: 195 LERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQ-------QRGG---- 243 L RR+ + L + L + L RGLR ++ ++ +RGG Sbjct: 649 LGRRIGPGARLVLQEQLLAAESLLAAIAAVHQLHRGLRRRQKELRHHGRGRGRRGGRRGR 708 Query: 244 -----LPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARA 285 +P+Q DL L G RG G RG G G RA Sbjct: 709 AVGLEVPLQVGVAHEDLAGLPGLGGRGRGGGTRG------GGGAVRA 749 >gi|31044432 LEM domain containing 2 isoform 1 [Homo sapiens] Length = 503 Score = 38.5 bits (88), Expect = 0.007 Identities = 44/148 (29%), Positives = 59/148 (39%), Gaps = 22/148 (14%) Query: 105 EALRLRL-AGLKASPSFKDPESRFMEPWAPLPL---------LVGEGTPAGSSWRGSPGA 154 E RLR A L+A P+ P + EPW P G+ P+ +SW GS G Sbjct: 64 EEARLREDAPLRARPAAASPRA---EPWLSQPASGSAYATPGAYGDIRPSAASWVGSRGL 120 Query: 155 RRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVG 214 PA++ R R S D +T +A RR SP A P ++ Sbjct: 121 AYPARPAQLRRRASVRGSSEE---DEDARTPDRATQGPGLAARRWWAASPAPARLPSSLL 177 Query: 215 GP------RGRRAGRLGSLRRGLRLGRQ 236 GP R RAG G+ R +GR+ Sbjct: 178 GPDPRPGLRATRAGPAGAARARPEVGRR 205 >gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens] Length = 654 Score = 38.1 bits (87), Expect = 0.009 Identities = 41/125 (32%), Positives = 49/125 (39%), Gaps = 25/125 (20%) Query: 111 LAGLKASPSFKDPESRFMEPWAP-LPLLVGE---GTPAGSSWRGSPGARRLPLPARVAER 166 L G+K P F P+ EP P LP GE P G RG PGA P P Sbjct: 336 LPGIKGEPGFIGPQG---EPGLPGLPGTKGERGEAGPPGRGERGEPGA---PGPKGKQGE 389 Query: 167 GGARVSR-----RGPRWDSGP--------QTGGQAHAELLALERRLPEHSPLRALKPLAV 213 G R + RG + DSG Q G Q E++ L H L+ + L V Sbjct: 390 SGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNL--HEALQRITTLTV 447 Query: 214 GGPRG 218 GP G Sbjct: 448 TGPPG 452 Score = 28.5 bits (62), Expect = 7.4 Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 14/152 (9%) Query: 141 GTPAGSSWRGSPGARR-LPLPARVAERGGARV-------SRRGPRWDSGPQTGGQAHAEL 192 G P +G G++ + P E+GG + +G + DSG G + Sbjct: 470 GIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMP--GPQGPSI 527 Query: 193 LALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWSRGP 252 + H P + P + GP+G G +G G + ++G + RGP Sbjct: 528 IGPPGPPGPHGPPGPMGPHGLPGPKGTD-GPMGP--HGPAGPKGERGEKGAMGEPGPRGP 584 Query: 253 RDLCWLRPTAGCNRGPGPRGCAKGSVGRGGAR 284 L G + PGPRG KG +G G + Sbjct: 585 YGLPGKDGEPGLDGFPGPRG-EKGDLGEKGEK 615 >gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens] Length = 642 Score = 38.1 bits (87), Expect = 0.009 Identities = 41/125 (32%), Positives = 49/125 (39%), Gaps = 25/125 (20%) Query: 111 LAGLKASPSFKDPESRFMEPWAP-LPLLVGE---GTPAGSSWRGSPGARRLPLPARVAER 166 L G+K P F P+ EP P LP GE P G RG PGA P P Sbjct: 336 LPGIKGEPGFIGPQG---EPGLPGLPGTKGERGEAGPPGRGERGEPGA---PGPKGKQGE 389 Query: 167 GGARVSR-----RGPRWDSGP--------QTGGQAHAELLALERRLPEHSPLRALKPLAV 213 G R + RG + DSG Q G Q E++ L H L+ + L V Sbjct: 390 SGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNL--HEALQRITTLTV 447 Query: 214 GGPRG 218 GP G Sbjct: 448 TGPPG 452 Score = 31.2 bits (69), Expect = 1.1 Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 14/160 (8%) Query: 141 GTPAGSSWRGSPGARR-LPLPARVAERGGARV-------SRRGPRWDSGPQTGGQAHAEL 192 G P +G G++ + P E+GG + +G + DSG G + Sbjct: 470 GIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMP--GPQGPSI 527 Query: 193 LALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWSRGP 252 + H P + P + GP+G G +G G + ++G + RGP Sbjct: 528 IGPPGPPGPHGPPGPMGPHGLPGPKGTD-GPMGP--HGPAGPKGERGEKGAMGEPGPRGP 584 Query: 253 RDLCWLRPTAGCNRGPGPRGCAKGSVGRGGARAAPNHTHV 292 L G + PGPRG KG +G G + HV Sbjct: 585 YGLPGKDGEPGLDGFPGPRG-EKGDLGEKGEKVTSPSQHV 623 >gi|224465238 hypothetical protein LOC283999 [Homo sapiens] Length = 394 Score = 37.7 bits (86), Expect = 0.012 Identities = 48/162 (29%), Positives = 61/162 (37%), Gaps = 25/162 (15%) Query: 143 PAGSSWRGSPGARRLPLPARVAERGGARVSRR--GP------RWDSGPQTGGQAHAELLA 194 P+ S SP AR++ L + RG + R GP RWD P A L+ Sbjct: 49 PSSSQALHSP-ARQVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSP---RFAARLS 104 Query: 195 LERRLPEHSPLRALK-----PLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWS 249 P+ R + P GGPRG+ AGR G + R R GR+R + + Sbjct: 105 TSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLR--RAGRRRARPPPVPRLPAP 162 Query: 250 RGPRDLCWLRPTAGCNRGPG-PRGCAKGSVGRGGARAAPNHT 290 R PR RP P P G G GR P T Sbjct: 163 RAPR-----RPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCT 199 Score = 31.2 bits (69), Expect = 1.1 Identities = 54/199 (27%), Positives = 67/199 (33%), Gaps = 61/199 (30%) Query: 97 IREPKTSPEAL-----RLRLAGLKASPSFKDPESRFMEP---------WAPLP-----LL 137 + +P +S +AL ++ L L S F++ + R P W+P P L Sbjct: 45 LADPPSSSQALHSPARQVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLS 104 Query: 138 VGEGTPAGSSWRGSPGARRLPLP------------ARVAERGGARVSR----------RG 175 P G + R G LP V R G R +R R Sbjct: 105 TSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRA 164 Query: 176 PRWDSGPQTGGQAHAELLALERRLPEHSPL--RALKPLAVGGPRGRRAGRLGSLRRGLRL 233 PR GP T P+ SP R P P GRR G LR R Sbjct: 165 PRRPRGPAT---------------PDPSPPAGRPHGPAGRAAP-GRRPGCTAQLRAPGRR 208 Query: 234 GRQR--VQQRGGLPVQWSR 250 GRQR V GG QW R Sbjct: 209 GRQRLLVHPGGGGRRQWQR 227 >gi|28875797 small protein rich in arginine and glycine [Homo sapiens] Length = 248 Score = 37.4 bits (85), Expect = 0.016 Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 204 PLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQ-RVQQRGGLPVQWSRGPRDLCWLRPTA 262 P+ AL A+GG RG + G R GLR GR R RGG+ ++ R + P Sbjct: 91 PIGALARGAIGG-RGLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLLRGGRAVAPRM 149 Query: 263 GCNRG-------PGPRGCAKGSVGRGG 282 G RG PG G +G++GRGG Sbjct: 150 GLRRGGVRGRGGPGRGGLGRGAMGRGG 176 Score = 36.2 bits (82), Expect = 0.035 Identities = 40/117 (34%), Positives = 49/117 (41%), Gaps = 21/117 (17%) Query: 141 GTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLP 200 G P G+ RG+ G R LP+ R RGG R GG+A LL L Sbjct: 89 GRPIGALARGAIGGRGLPIIQRGLPRGGLR--------------GGRATRTLLRGGMSLR 134 Query: 201 EHSPL---RALKP---LAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWSRG 251 + L RA+ P L GG RGR G L RG +GR + RG + RG Sbjct: 135 GQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGRG-AMGRGGIGGRGRGMIGRGRG 190 >gi|112821681 G protein-regulated inducer of neurite outgrowth 1 [Homo sapiens] Length = 1008 Score = 37.4 bits (85), Expect = 0.016 Identities = 48/185 (25%), Positives = 66/185 (35%), Gaps = 20/185 (10%) Query: 21 QVALLGQDGGLARQQGAIDAQLLHRSRSRCSREALSRRKRRREP-GEGAAAPGMVPAGDS 79 + L GQ+G A G A L + + S + R+ EP G P + DS Sbjct: 639 ETKLPGQEGAAA--PGEAGAVCLKKETPQASEKVDPGSCRKAEPLASGKGEPVSLGKADS 696 Query: 80 RPLTALLACNLN---PFYLLIREPKTSPEALRLRLAGLKASPSFKDPESRFMEPWAPLPL 136 P + +L P L +P +S L + G SP +EP A P+ Sbjct: 697 APSRKTESPSLGKVVPLSLEKTKPSSSSRQLDRKALGSARSPEGARGSEGRVEPKAE-PV 755 Query: 137 LVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVS---RRGPRW----------DSGPQ 183 E + G + GA R P P A G R + P W D+G Q Sbjct: 756 SSTEASSLGQKDLEAAGAERSPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPREDAGTQ 815 Query: 184 TGGQA 188 G QA Sbjct: 816 AGAQA 820 >gi|167614500 lymphocyte-activation protein 3 precursor [Homo sapiens] Length = 525 Score = 36.2 bits (82), Expect = 0.035 Identities = 43/146 (29%), Positives = 58/146 (39%), Gaps = 16/146 (10%) Query: 127 FMEP-W-APL-PLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQ 183 F++P W AP+ PL G P + G+P +LP + + + + R G W P Sbjct: 11 FLQPLWVAPVKPLQPGAEVPVVWAQEGAPA--QLPCSPTIPLQDLSLLRRAGVTWQHQPD 68 Query: 184 TGGQAHAELLALERRLPEHSPLRALKPLAVG--GPRGRRAGRLGSLRRGLRLGRQRVQQR 241 +G A A P H P A GPR RR L GLR GR +Q R Sbjct: 69 SGPPAAA---------PGHPLAPGPHPAAPSSWGPRPRRYTVLSVGPGGLRSGRLPLQPR 119 Query: 242 GGLPVQWSRGPRDLCWLRPTAGCNRG 267 L + + WLRP + G Sbjct: 120 VQLDERGRQRGDFSLWLRPARRADAG 145 >gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo sapiens] Length = 459 Score = 35.8 bits (81), Expect = 0.046 Identities = 62/217 (28%), Positives = 80/217 (36%), Gaps = 31/217 (14%) Query: 55 LSRRKRRREPGEGAAAPGMVPAGD-SRPLTALLACNLNPFYLLIREPKTSPEALRLRLAG 113 L R R+RE G G+AAP + +GD + L A P +L EP+ RL Sbjct: 232 LLSRTRQRELG-GSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPD 290 Query: 114 LKASPSFKDPESRFMEPWAP-------LPLLVGEGTPAGSSWRGSPGARRLP------LP 160 + P P R P AP L VG G SWR G+ LP L Sbjct: 291 FEKQPH--SPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSCAQLA 348 Query: 161 ARVAERGGARVSR---RGPRWDSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPR 217 ++A G + SR G R + GG A R L+ L Sbjct: 349 QQLARAGKSTESRNRLNGRRGGVEARGGGGGVA-------RAERDDVLQGLGLRGTEDWC 401 Query: 218 GRRAGRLGS-LRRGLR---LGRQRVQQRGGLPVQWSR 250 RRA R S +RRG G +R +PV +R Sbjct: 402 ARRAPRTSSGVRRGAAPGFRGSSNTARRRSIPVSLNR 438 >gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo sapiens] Length = 459 Score = 35.8 bits (81), Expect = 0.046 Identities = 62/217 (28%), Positives = 80/217 (36%), Gaps = 31/217 (14%) Query: 55 LSRRKRRREPGEGAAAPGMVPAGD-SRPLTALLACNLNPFYLLIREPKTSPEALRLRLAG 113 L R R+RE G G+AAP + +GD + L A P +L EP+ RL Sbjct: 232 LLSRTRQRELG-GSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPD 290 Query: 114 LKASPSFKDPESRFMEPWAP-------LPLLVGEGTPAGSSWRGSPGARRLP------LP 160 + P P R P AP L VG G SWR G+ LP L Sbjct: 291 FEKQPH--SPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSCAQLA 348 Query: 161 ARVAERGGARVSR---RGPRWDSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPR 217 ++A G + SR G R + GG A R L+ L Sbjct: 349 QQLARAGKSTESRNRLNGRRGGVEARGGGGGVA-------RAERDDVLQGLGLRGTEDWC 401 Query: 218 GRRAGRLGS-LRRGLR---LGRQRVQQRGGLPVQWSR 250 RRA R S +RRG G +R +PV +R Sbjct: 402 ARRAPRTSSGVRRGAAPGFRGSSNTARRRSIPVSLNR 438 >gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] Length = 1499 Score = 35.4 bits (80), Expect = 0.060 Identities = 44/149 (29%), Positives = 56/149 (37%), Gaps = 31/149 (20%) Query: 141 GTPAGSSWRGSPGARRLP----LPARVAERGGARVSRRGPRWDSG-PQTGGQAHAELLAL 195 G P + GSPGAR P LP RG GP+ + G P + G+A Sbjct: 273 GNPGEVGFAGSPGARGFPGAPGLPGLKGHRG--HKGLEGPKGEVGAPGSKGEAGPT---- 326 Query: 196 ERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWSRGPRDL 255 P+ A+ PL G G R GRLG + QRG + GP Sbjct: 327 -------GPMGAMGPLGPRGMPGER-GRLGP--------QGAPGQRGAHGMPGKPGPMGP 370 Query: 256 CWLRPTAGCNRGPGPRGCAKGSVGRGGAR 284 + ++G PG KG G GAR Sbjct: 371 LGIPGSSGFPGNPG----MKGEAGPTGAR 395 Score = 30.4 bits (67), Expect = 1.9 Identities = 52/196 (26%), Positives = 68/196 (34%), Gaps = 43/196 (21%) Query: 113 GLKASPSFKDPESRFMEPWAPLPLLVGE----GTPAGSSWRGSPGARRLPLPARVAERGG 168 GL +P + PE + AP GE G P RG PG+ LP Sbjct: 573 GLTGNPGVQGPEGKLGPLGAP-----GEDGRPGPPGSIGIRGQPGSMGLP---------- 617 Query: 169 ARVSRRGPRWDSG-PQTGGQAHAELLALERRLP----EHSPLRALKPLAVGGPRGRRA-- 221 GP+ SG P G+A + +R P E P + P + G RG + Sbjct: 618 ------GPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPP 671 Query: 222 ---------GRLGSLRRGLRLGRQRVQ-QRGGLPVQWSRGPRDLCWLRPTAGCNRGPGPR 271 G G G + G Q V G + RG R R G PG + Sbjct: 672 GPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEK 731 Query: 272 GCAKGSVGRGGARAAP 287 G A G G G + +P Sbjct: 732 GMA-GGHGPDGPKGSP 746 Score = 28.1 bits (61), Expect = 9.6 Identities = 46/164 (28%), Positives = 59/164 (35%), Gaps = 40/164 (24%) Query: 130 PWAPLPLLVGEGTPAGSSWRGSPGAR-RLPLPARVAERGGARVSRRGPRWDSGPQTGGQA 188 P P P+ G P + RG PG+R + P R +RG +GPR D G G + Sbjct: 1085 PGTPGPV----GAPGDAGQRGDPGSRGPIGPPGRAGKRG--LPGPQGPRGDKGDH-GDRG 1137 Query: 189 HAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQW 248 +R H L+ L GP G G GS G+P + Sbjct: 1138 -------DRGQKGHRGFTGLQGLP--GPPGPN-GEQGS---------------AGIPGPF 1172 Query: 249 SRGPRDLCWLRPTAGCNRGPGPRG-----CAKGSVGRGGARAAP 287 GPR +G PGP G +GSVG G P Sbjct: 1173 --GPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPP 1214 >gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo sapiens] Length = 697 Score = 34.3 bits (77), Expect = 0.13 Identities = 43/153 (28%), Positives = 56/153 (36%), Gaps = 25/153 (16%) Query: 113 GLKASPSFKDPESRFMEPWA-----PLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERG 167 G+K S D + + +A P+ G W G RR +V + Sbjct: 452 GVKGSQRHGDSTTSLIISYALVTIMDFPIPQGLALTTHPGWHSEAGGRRDGGAGQVVQGL 511 Query: 168 GARVSRRGPRWDSGPQTGGQAHA--ELLALERR--------------LPEHSPLRALKPL 211 RRGP+ +G Q G QA A AL R + RA KP+ Sbjct: 512 RGPHGRRGPQVQAGWQAGRQAAALGRGAALRRAAQGAGSASGLLGGAVGARGRRRAHKPV 571 Query: 212 AVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGL 244 VG R R+G+ RR G RV QRG L Sbjct: 572 VVGERLRGRGARVGTWRR----GGGRVAQRGQL 600 Score = 28.1 bits (61), Expect = 9.6 Identities = 13/26 (50%), Positives = 14/26 (53%) Query: 56 SRRKRRREPGEGAAAPGMVPAGDSRP 81 SR+K R PG A PG PAG P Sbjct: 188 SRKKSFRAPGSPACGPGRRPAGTPMP 213 >gi|169208488 PREDICTED: hypothetical protein [Homo sapiens] Length = 150 Score = 34.3 bits (77), Expect = 0.13 Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 9/106 (8%) Query: 144 AGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLPEHS 203 AGS R R +P + A R GAR +R P +G E A RL Sbjct: 10 AGSHLRAQRLGREVPAAPKPAPRQGARETRPPPPPTQASHSGAGQTREKGARSPRLGNRG 69 Query: 204 PLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWS 249 RA G P R +GRL S L L R+ R + +QWS Sbjct: 70 LSRA------GSPLSRDSGRLLS---ALALPREAATGRLTVMLQWS 106 >gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] Length = 1860 Score = 34.3 bits (77), Expect = 0.13 Identities = 50/170 (29%), Positives = 63/170 (37%), Gaps = 40/170 (23%) Query: 113 GLKASPSFKDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVS 172 G+ P P+ P P G GTP +G PG+R P RG Sbjct: 1015 GMMGPPGVPGPKGSMGHPGMP----GGMGTPGEPGPQGPPGSRGPP-----GMRGAK--G 1063 Query: 173 RRGPRWDSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLR 232 RRGPR GP G Q R LK GP+G R GR G ++G+ Sbjct: 1064 RRGPRGPDGP-AGEQGS----------------RGLK--GPPGPQG-RPGRPG--QQGVA 1101 Query: 233 LGRQRVQQRGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGG 282 R + RG + GP T G PGP+G +G +G G Sbjct: 1102 GERGHLGSRGFPGIPGPSGPPG------TKGLPGEPGPQG-PQGPIGPPG 1144 >gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] Length = 325 Score = 33.9 bits (76), Expect = 0.18 Identities = 79/285 (27%), Positives = 104/285 (36%), Gaps = 68/285 (23%) Query: 26 GQDGGLARQQGAIDAQ-------LLH---RSRSRCSREAL------SRRKRRREPGEGAA 69 G+ GGL+ Q G + Q LH R+ R R + ++R ++E A Sbjct: 65 GEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARAR 124 Query: 70 APGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKASPSFKDPESRFME 129 APG VP G R LL + P L R + P LR+R PS + Sbjct: 125 APGRVPGGRPR----LLQQSRPP--LPRRHGRQRPVVLRVR----AVHPSLQ-------- 166 Query: 130 PWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQA- 188 +GEG P+G G+ G+ L E +R RR P G QTG + Sbjct: 167 -----VCHLGEGLPSGEGEDGAEGSHSLD------ECPPSRQVRRQPHIPFGFQTGVEPP 215 Query: 189 -HAELLALERRLPEHSPLRALKPLAVGGPRGRRAGRL-------GSLRRGLRLGRQRVQQ 240 HA + P + R L PL RG + RL G R G Sbjct: 216 HHA------AQHPPRAQTRRLFPL-----RGLQGSRLLPDLLPTGEGRPGEDPPFAGPSA 264 Query: 241 RGGLPVQWS--RGPRDLCWLRPTAGCNRGPGPRGCAKGSVGRGGA 283 +P+ WS PR + L G R P G GS R GA Sbjct: 265 WLHVPLFWSLLERPRPILRLAYLEG-RRFPWNAGLRPGSAARAGA 308 >gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo sapiens] Length = 262 Score = 33.9 bits (76), Expect = 0.18 Identities = 44/136 (32%), Positives = 50/136 (36%), Gaps = 37/136 (27%) Query: 149 RGSPG--ARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLPEHSPLR 206 RG+ G ARRL LP GG S R P W+SG RR P Sbjct: 120 RGACGNTARRL-LPG-----GGRLRSPRDPAWESG---------------RRRPASGVRV 158 Query: 207 ALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRG------GLPVQWSR----GPRDLC 256 L V GPRG R +LG G + Q R +W + GPR L Sbjct: 159 ESGVLPVPGPRGSRLSKLGGPHARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRRLG 218 Query: 257 WLRPTAGCNRGPGPRG 272 W P N PG RG Sbjct: 219 WATP----NPLPGHRG 230 >gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sapiens] Length = 451 Score = 33.9 bits (76), Expect = 0.18 Identities = 49/155 (31%), Positives = 59/155 (38%), Gaps = 25/155 (16%) Query: 149 RGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLPEHSPLRAL 208 R PG P PAR E ++R P SG G A++ R L+ Sbjct: 114 RAIPGVH--PRPARQEE------AQRRPAPRSGSHEQG-------AVQARAAGRQQLQHR 158 Query: 209 KPLAVGGP-RGRRAGRLGSLR-RGLRLGRQRVQQRGGLPVQWSRGPRDLCWLRPTAGCNR 266 +P A G P R R A R+ LR RG R R Q RG V GP RP A R Sbjct: 159 QPPARGRPVRRRPAARVLRLRCRGSR-ARSLQQARGQQRVAQGSGPVQRREARPGASRRR 217 Query: 267 GPG-------PRGCAKGSVGRGGARAAPNHTHVVP 294 GP PR G + + GA + H P Sbjct: 218 GPALQQQLGHPRVSVPGGLVQRGAPRPVHRAHRGP 252 >gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sapiens] Length = 487 Score = 33.9 bits (76), Expect = 0.18 Identities = 49/155 (31%), Positives = 59/155 (38%), Gaps = 25/155 (16%) Query: 149 RGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLPEHSPLRAL 208 R PG P PAR E ++R P SG G A++ R L+ Sbjct: 114 RAIPGVH--PRPARQEE------AQRRPAPRSGSHEQG-------AVQARAAGRQQLQHR 158 Query: 209 KPLAVGGP-RGRRAGRLGSLR-RGLRLGRQRVQQRGGLPVQWSRGPRDLCWLRPTAGCNR 266 +P A G P R R A R+ LR RG R R Q RG V GP RP A R Sbjct: 159 QPPARGRPVRRRPAARVLRLRCRGSR-ARSLQQARGQQRVAQGSGPVQRREARPGASRRR 217 Query: 267 GPG-------PRGCAKGSVGRGGARAAPNHTHVVP 294 GP PR G + + GA + H P Sbjct: 218 GPALQQQLGHPRVSVPGGLVQRGAPRPVHRAHRGP 252 >gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] Length = 1464 Score = 33.5 bits (75), Expect = 0.23 Identities = 41/151 (27%), Positives = 55/151 (36%), Gaps = 30/151 (19%) Query: 139 GEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERR 198 GE PAG G+PGA P P A + G R GP +GP Sbjct: 1037 GETGPAGPP--GAPGAPGAPGPVGPAGKSGDR-GETGPAGPAGPV--------------- 1078 Query: 199 LPEHSPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWSRGPRDLCWL 258 P+ A P GPRG + RG++ RG +Q GP Sbjct: 1079 ----GPVGARGPAGPQGPRGDKGETGEQGDRGIK------GHRGFSGLQGPPGPPGSPGE 1128 Query: 259 RPTAGCNRGPGPRG--CAKGSVGRGGARAAP 287 + +G + GPRG + G+ G+ G P Sbjct: 1129 QGPSGASGPAGPRGPPGSAGAPGKDGLNGLP 1159 Score = 32.3 bits (72), Expect = 0.51 Identities = 43/148 (29%), Positives = 51/148 (34%), Gaps = 26/148 (17%) Query: 141 GTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLP 200 G P RG PG+R P VA G G R GP P Sbjct: 479 GLPGPPGERGGPGSRGFPGADGVAGPKGP----AGERGSPGPAG---------------P 519 Query: 201 EHSPLRALKPLAVGGPRGR-RAGRLGSLRRGLRLGRQRVQQRGGLPVQWSRGPRDLCWLR 259 + SP A +P G P + G GS + G + G P GP R Sbjct: 520 KGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP-----GPPGPPGAR 574 Query: 260 PTAGCNRGPGPRGCAKGSVGRGGARAAP 287 AG PGP+G A G G+ G R P Sbjct: 575 GQAGVMGFPGPKGAA-GEPGKAGERGVP 601 >gi|124378039 SEC16 homolog A [Homo sapiens] Length = 2357 Score = 33.5 bits (75), Expect = 0.23 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 21/95 (22%) Query: 140 EGTPAGSSWRGSPGARRLPLPARVAERGG-------ARVSRRGPRWD-SGPQTGGQAHAE 191 + TP GSS + SP + P PA ++ G AR S +GP GP T +AHA Sbjct: 63 QSTPLGSSSKSSPPVLQGPAPAGFSQHPGLLVPHTHARDSSQGPCEPLPGPLTQPRAHA- 121 Query: 192 LLALERRLPEHSPLR-ALKPLAVGGPRGRRAGRLG 225 SP AL P A GP R+ +G Sbjct: 122 -----------SPFSGALTPSAPPGPEMNRSAEVG 145 >gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] Length = 373 Score = 33.5 bits (75), Expect = 0.23 Identities = 50/171 (29%), Positives = 58/171 (33%), Gaps = 47/171 (27%) Query: 139 GEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPR-WDSGPQTGGQAHAELLALER 197 G G GS R G R + +R+A G R PR W GGQ L + Sbjct: 137 GRGAVRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGW------GGQGAERLGVHQP 190 Query: 198 RLPEH-------------------SPLRALKPLAVGGPRGRRAGRLGSLRRGLRLGRQRV 238 LP H SP RA +P + G PR RR LGS R GR + Sbjct: 191 GLPTHAALRGGGGGSEGGGGGARPSPPRARQPPS-GRPRPRRTRLLGSAER--HTGRAAL 247 Query: 239 QQRGGLPVQWSRGPRDLCWLRPTAGCNRGPGPRGCAKGSVG-----RGGAR 284 + G L RP A RG A RGGAR Sbjct: 248 ARHGQLS-------------RPHAAVRNSSRGRGAATSVSAAARPTRGGAR 285 Score = 29.3 bits (64), Expect = 4.3 Identities = 55/184 (29%), Positives = 67/184 (36%), Gaps = 43/184 (23%) Query: 130 PWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAH 189 P AP+ P + GSP RR R+A G R PR G Sbjct: 64 PTAPVSFSRIRRNPLRTQLSGSP-PRRPTSVLRLASPAGDLPRRPRPRAGGG-------- 114 Query: 190 AELLALERRLPEHSPLRALKPLAVGGPRGR-RAGR---LGS-LRRGLRLGRQRVQQ---- 240 HSP A+ + GG +GR R GR GS RRG L QRV+ Sbjct: 115 -----------RHSPRPAVGTIFRGGRKGRLREGRGAVRGSGKRRGWGLRPQRVRSRLAG 163 Query: 241 ----RGG--LPVQWSRGPRDLCWLR----PTAGCNRGPGPRGCAKGSVGRGGARAAPNHT 290 RGG P W + + PT RG G G ++G G GGAR +P Sbjct: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGG--GGSEG--GGGGARPSPPRA 219 Query: 291 HVVP 294 P Sbjct: 220 RQPP 223 >gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] Length = 904 Score = 33.5 bits (75), Expect = 0.23 Identities = 48/185 (25%), Positives = 65/185 (35%), Gaps = 32/185 (17%) Query: 52 REALSRRKRRREPGEGAAAPGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRL 111 ++ALS + P G +P S+P T P+ SP A L+ Sbjct: 457 KQALSALEEAGAPAPGRPSPATAAVPSSQPKT--------------EAPQASPLAKPLQ- 501 Query: 112 AGLKASPSFKDPESRFMEPWAPLPLL----------VGEGTPAGSSWRGSPGARRLPLPA 161 +SP SR MEP APL G A SS G GA P P Sbjct: 502 ---SSSPRVLGLPSR-MEPPAPLSTSSTSQASALPPAGRRNLAESSGVGRVGAGSRPKPE 557 Query: 162 RVAERGGARVSRR--GPRWDSGPQTGGQA-HAELLALERRLPEHSPLRALKPLAVGGPRG 218 +G + + G + G A L ++RR P L+ +P A+ PR Sbjct: 558 APMAKGKSTTLTQDMSTSLQEGQEDGPAGWRANLKPVDRRSPAERTLKPKEPRALAEPRA 617 Query: 219 RRAGR 223 A R Sbjct: 618 GEAPR 622 >gi|6912446 potassium voltage-gated channel, subfamily H, member 4 [Homo sapiens] Length = 1017 Score = 33.1 bits (74), Expect = 0.30 Identities = 48/152 (31%), Positives = 57/152 (37%), Gaps = 19/152 (12%) Query: 63 EPGEGAAA------PGMVPAGDSRPLTALLACNLNPFYLLIREPKTSPEALRLRLAGLKA 116 EPG G P + PA L +LL L PF L+ P SP +L LAG Sbjct: 733 EPGGGPRPRRPLLLPNLSPARPRGSLVSLLGEELPPFSALVSSPSLSP-SLSPALAGQGH 791 Query: 117 SPSFKDPESRFMEPWAPLPLLV---GEGTPAGSSWRGSPGARRLPLPARVAERGGARVSR 173 S S P R W P LL+ G P S R G + AE R SR Sbjct: 792 SASPHGP-PRCSAAWKPPQLLIPPLGTFGPPDLSPRIVDG---IEDSGSTAEAPSFRFSR 847 Query: 174 R----GPRWDSGPQTGGQAHAELLALERRLPE 201 R PR P TG + EL + + E Sbjct: 848 RPELPRPR-SQAPPTGTRPSPELASEAEEVKE 878 >gi|239756566 PREDICTED: hypothetical protein [Homo sapiens] Length = 214 Score = 33.1 bits (74), Expect = 0.30 Identities = 37/129 (28%), Positives = 49/129 (37%), Gaps = 16/129 (12%) Query: 104 PEALRLRLAGLKASPSFKDPESRFMEPWAPLPLLVGEGTPAGSSWRGSPGARRLPLPARV 163 P +R+ G++ +P DP+++ P + + G S G G R P A Sbjct: 67 PPTRAIRMQGIRNTPG-GDPKAQACFPTSAANRSF-QPRSLGGSLAGIAGPRPSPCQAHD 124 Query: 164 AERGGA-RVSRRGPRWDSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVG-GPRGRRA 221 ERGG R S R D G R+P PL L P A G GR + Sbjct: 125 CERGGGGRPSHRAAAVDQGRP------------RPRVPRGQPLPGLHPSAAAPGVGGRAS 172 Query: 222 GRLGSLRRG 230 G G L G Sbjct: 173 GAGGLLGEG 181 >gi|20336196 A-kinase anchor protein 7 isoform beta [Homo sapiens] Length = 104 Score = 33.1 bits (74), Expect = 0.30 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 170 RVSRRGPRWDSGPQTGGQA-HAELLALERRLPEHSPLRALK 209 R S+ P W SG + GG+ AEL+ L +RL E++ L+A++ Sbjct: 29 RYSKDIPSWSSGEKNGGEPDDAELVRLSKRLVENAVLKAVQ 69 >gi|51242137 transmembrane protein 200B [Homo sapiens] Length = 307 Score = 33.1 bits (74), Expect = 0.30 Identities = 53/187 (28%), Positives = 73/187 (39%), Gaps = 35/187 (18%) Query: 98 REPKTSPEALRLRLAGLKASPSFKDPESRFMEPWAPLPLLVGEGTPAGSSW---RGSPGA 154 R P++ PE LR+R A + P F A L +LVG G W G+PG+ Sbjct: 31 RRPRSPPEPLRVR-----ARLRLRSPSGAFAALGA-LVVLVGMGIAVAGYWPHRAGAPGS 84 Query: 155 RRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHAELLALERRLPEHSPLRALKPLAVG 214 R A + + + R G + GG+AH H LR L P+ +G Sbjct: 85 R----AANASSPQMSELRREG-------RGGGRAHG----------PHERLRLLGPVIMG 123 Query: 215 GPRGRRAGRLGSLRRGLRLGRQRVQQRGGLPVQWSR---GPRDLCWLRPTAGCNRGPGPR 271 L L +R++Q G L Q R GP C L P+ G R P Sbjct: 124 VGLFVFICANTLLYENRDLETRRLRQ-GVLRAQALRPPDGPGWDCALLPSPG-PRSPRAV 181 Query: 272 GCAKGSV 278 GCA+ + Sbjct: 182 GCAEPEI 188 >gi|223278356 glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Homo sapiens] Length = 1115 Score = 32.7 bits (73), Expect = 0.39 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 17/118 (14%) Query: 90 LNPFYLLIREPKTSPEALRLRLAGLKASPSFKDP-------------ESRFMEPWAPLPL 136 L+ ++LL R P L LAG+ +S S P + ++PW P Sbjct: 4 LSLWWLLSRVCLLLPPPCALVLAGVPSSSSHPQPCQILKRIGHAVRVGAVHLQPWTTAPR 63 Query: 137 LVG---EGTPAGSSW-RGSPGARRLPLPARVAERGGARVSRRGPRWDSGPQTGGQAHA 190 + + AG+ PG RR P P+ A G+ + RGP P G +A A Sbjct: 64 AASRAPDDSRAGAQRDEPEPGTRRSPAPSPGARWLGSTLHGRGPPGSRKPGEGARAEA 121 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.138 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,328,126 Number of Sequences: 37866 Number of extensions: 853942 Number of successful extensions: 3663 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 210 Number of HSP's that attempted gapping in prelim test: 3463 Number of HSP's gapped (non-prelim): 398 length of query: 295 length of database: 18,247,518 effective HSP length: 102 effective length of query: 193 effective length of database: 14,385,186 effective search space: 2776340898 effective search space used: 2776340898 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.