LOC100292397 22860

Name: LOC100292397	Sequence: fasta or formatted (214aa)		NCBI GI: 239756566
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 24 3 C cysteine 2.8 6 1 D aspartate 1.9 4 1 E glutamate 1.9 4 1 F phenylalanine 2.3 5 1 G glycine 16.8 36 4 H histidine 2.8 6 1 I isoleucine 2.3 5 1 K lysine 4.2 9 3 L leucine 6.1 13 2 M methionine 2.8 6 1 N asparagine 1.9 4 1 P proline 12.6 27 2 Q glutamine 4.7 10 1 R arginine 11.7 25 2 S serine 7.9 17 1 T threonine 3.7 8 2 V valine 1.4 3 1 W tryptophan 0.9 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein C6orf174 0.065 hypothetical protein LOC387104 C1QL2 0.049 complement component 1, q subcomponent-like 2 [Homo... COL3A1 0.047 collagen type III alpha 1 preproprotein PHOX2B 0.047 paired-like homeobox 2b PRR12 0.047 proline rich 12 LOC100128398 0.044 PREDICTED: hypothetical protein LOC100128398 0.044 PREDICTED: hypothetical protein LOC100128398 0.044 PREDICTED: hypothetical protein BPTF 0.044 bromodomain PHD finger transcription factor isoform ... BPTF 0.044 bromodomain PHD finger transcription factor isoform ... ZNF282 0.042 zinc finger protein 282 COL7A1 0.040 alpha 1 type VII collagen precursor CNOT3 0.040 CCR4-NOT transcription complex, subunit 3 MBD2 0.037 methyl-CpG binding domain protein 2 testis-specific i... MBD2 0.037 methyl-CpG binding domain protein 2 isoform 1 WTIP 0.035 Wilms tumor 1 interacting protein COL11A1 0.035 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.035 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.035 alpha 1 type XI collagen isoform A preproprotein [Ho... COL1A1 0.033 alpha 1 type I collagen preproprotein LOC100132999 0.033 PREDICTED: hypothetical protein LOC730256 0.033 PREDICTED: hypothetical protein HCN4 0.033 hyperpolarization activated cyclic nucleotide-gated p... COL2A1 0.033 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.033 collagen, type II, alpha 1 isoform 2 precursor [Hom... ARID1B 0.033 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.033 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.033 AT rich interactive domain 1B (SWI1-like) isoform 3 ... CKAP4 0.033 cytoskeleton-associated protein 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.