TMEM88B 16685

Name: TMEM88B	Sequence: fasta or formatted (487aa)		NCBI GI: 239741003
Description: PREDICTED: hypothetical protein LOC643965		Not currently referenced in the text
Other entries for this name: alt prot {163aa} hypothetical protein LOC643965 alt prot {451aa} PREDICTED: hypothetical protein LOC643965
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.5 56 3 C cysteine 2.9 14 1 D aspartate 1.8 9 1 E glutamate 4.1 20 4 F phenylalanine 1.0 5 1 G glycine 11.3 55 4 H histidine 3.7 18 1 I isoleucine 0.6 3 1 K lysine 0.6 3 1 L leucine 10.5 51 3 M methionine 1.0 5 1 N asparagine 0.4 2 1 P proline 12.3 60 3 Q glutamine 7.8 38 3 R arginine 12.9 63 3 S serine 6.4 31 2 T threonine 2.9 14 2 V valine 7.0 34 2 W tryptophan 1.0 5 1 Y tyrosine 0.2 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC643965 TMEM88B 0.852 PREDICTED: hypothetical protein LOC643965 TMEM88B 0.318 hypothetical protein LOC643965 LOC100293296 0.100 PREDICTED: hypothetical protein TMEM88 0.039 transmembrane protein 88 LOC100293596 0.021 PREDICTED: similar to mucin SPTBN4 0.020 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SRRM2 0.020 splicing coactivator subunit SRm300 FLJ37078 0.020 hypothetical protein LOC222183 LOC100134702 0.019 PREDICTED: similar to mucin LOC100288382 0.019 PREDICTED: hypothetical protein XP_002342213 SYN1 0.019 synapsin I isoform Ia SYN1 0.019 synapsin I isoform Ib TTBK1 0.017 tau tubulin kinase 1 LOC100292934 0.016 PREDICTED: hypothetical protein LOC100290359 0.016 PREDICTED: hypothetical protein XP_002346414 LOC100288496 0.016 PREDICTED: hypothetical protein XP_002342747 LOC100287202 0.016 PREDICTED: hypothetical protein XP_002342114 MBD6 0.016 methyl-CpG binding domain protein 6 MICALL1 0.015 molecule interacting with Rab13 FLJ22184 0.015 PREDICTED: hypothetical protein LOC80164 C9orf140 0.015 tumor specificity and mitosis phase-dependent expre... LOC729199 0.015 PREDICTED: hypothetical protein LOC100294444 0.015 PREDICTED: similar to family with sequence similari... LOC100129463 0.015 PREDICTED: hypothetical protein LOC100129463 0.015 PREDICTED: hypothetical protein LOC100129463 0.015 PREDICTED: hypothetical protein FAM48B2 0.015 family with sequence similarity 48, member B2 [Homo... LOC100128440 0.014 PREDICTED: hypothetical protein LOC100128440 0.014 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.