Guide to the Human Genome
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Name: LAG3 Sequence: fasta or formatted (525aa) NCBI GI: 167614500
Description:

lymphocyte-activation protein 3 precursor

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         43           3
 C cysteine            1.5          8           1
 D aspartate           2.9         15           1
 E glutamate           5.7         30           2
 F phenylalanine       3.4         18           1
 G glycine             9.3         49           3
 H histidine           2.5         13           3
 I isoleucine          1.9         10           2
 K lysine              1.0          5           1
 L leucine            13.3         70           4
 M methionine          0.8          4           1
 N asparagine          1.1          6           1
 P proline            11.8         62           2
 Q glutamine           6.5         34           2
 R arginine            8.0         42           2
 S serine              7.6         40           2
 T threonine           4.4         23           1
 V valine              5.7         30           2
 W tryptophan          2.9         15           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte-activation protein 3 precursor 
HSPG2                 0.031   heparan sulfate proteoglycan 2 
DCC                   0.025   deleted in colorectal carcinoma 
IL1R2                 0.022   interleukin 1 receptor, type II precursor 
IL1R2                 0.022   interleukin 1 receptor, type II precursor 
PPM1E                 0.021   protein phosphatase 1E 
MXRA5                 0.021   adlican 
SASH1                 0.020   SAM and SH3 domain containing 1 
TTN                   0.019   titin isoform N2-A 
CEACAM1               0.019   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.019   carcinoembryonic antigen-related cell adhesion molec...
OBSL1                 0.019   obscurin-like 1 
NOL3                  0.018   nucleolar protein 3 
HCLS1                 0.017   hematopoietic cell-specific Lyn substrate 1 
SLC16A2               0.016   solute carrier family 16, member 2 
CD276                 0.016   CD276 antigen isoform a 
CD276                 0.016   CD276 antigen isoform b 
AMELX                 0.016   amelogenin (X chromosome) isoform 3 precursor 
AMELX                 0.016   amelogenin (X chromosome) isoform 2 precursor 
AMELX                 0.016   amelogenin (X chromosome) isoform 1 precursor 
LOC147645             0.015   PREDICTED: hypothetical protein 
LOC147645             0.015   PREDICTED: hypothetical protein 
LOC147645             0.015   PREDICTED: hypothetical protein 
LRRC4B                0.015   leucine rich repeat containing 4B 
ZNF219                0.015   zinc finger protein 219 
ZNF219                0.015   zinc finger protein 219 
ZNF219                0.015   zinc finger protein 219 
LOC100292387          0.014   PREDICTED: similar to hemicentin 2 
HMCN2                 0.014   PREDICTED: hemicentin 2 
LOC100289200          0.014   PREDICTED: hypothetical protein XP_002342997 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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