Guide to the Human Genome
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Name: AKAP7 Sequence: fasta or formatted (104aa) NCBI GI: 20336196
Description:

A-kinase anchor protein 7 isoform beta

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [81aa] A-kinase anchor protein 7 isoform alpha
alt prot [326aa] A-kinase anchor protein 7 isoform gamma
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8          6           2
 C cysteine            1.9          2           2
 D aspartate           5.8          6           2
 E glutamate          11.5         12           2
 F phenylalanine       1.9          2           1
 G glycine             7.7          8           2
 H histidine           0.0          0           0
 I isoleucine          1.9          2           1
 K lysine              8.7          9           1
 L leucine             7.7          8           1
 M methionine          1.0          1           1
 N asparagine          8.7          9           2
 P proline             3.8          4           1
 Q glutamine           5.8          6           2
 R arginine            4.8          5           1
 S serine             12.5         13           4
 T threonine           1.9          2           1
 V valine              5.8          6           1
 W tryptophan          1.0          1           1
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A-kinase anchor protein 7 isoform beta 
AKAP7                 0.694   A-kinase anchor protein 7 isoform alpha 
AKAP7                 0.575   A-kinase anchor protein 7 isoform gamma 
LOC642597             0.108   hypothetical protein LOC642597 
LOC100291779          0.043   PREDICTED: hypothetical protein XP_002345879 
LOC100287281          0.043   PREDICTED: hypothetical protein 
LOC100287281          0.043   PREDICTED: hypothetical protein XP_002342581 
NEFM                  0.027   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.027   neurofilament, medium polypeptide 150kDa isoform 2 ...
MRPS36                0.016   mitochondrial ribosomal protein S36 
UNC13C                0.016   unc-13 homolog C 
RABGAP1               0.016   RAB GTPase activating protein 1 
CASP8AP2              0.011   caspase 8 associated protein 2 
CASP8AP2              0.011   caspase 8 associated protein 2 
CASP8AP2              0.011   caspase 8 associated protein 2 
POLR3A                0.011   polymerase (RNA) III (DNA directed) polypeptide A, 1...
DNAJC21               0.011   DnaJ homology subfamily A member 5 isoform 1 
CASC3                 0.011   metastatic lymph node 51 
FAM13A                0.011   family with sequence similarity 13, member A1 isofor...
FAM13A                0.011   family with sequence similarity 13, member A1 isofor...
PCGF5                 0.011   polycomb group ring finger 5 
OTOG                  0.011   PREDICTED: otogelin isoform 1 
OTOG                  0.011   PREDICTED: otogelin isoform 2 
OTOG                  0.011   PREDICTED: otogelin isoform 2 
OTOG                  0.011   PREDICTED: otogelin isoform 1 
OTOG                  0.011   PREDICTED: otogelin isoform 2 
OTOG                  0.011   PREDICTED: otogelin isoform 1 
APOBEC2               0.011   apolipoprotein B mRNA editing enzyme, catalytic polyp...
SPEF1                 0.011   calponin-homology and microtubule-associated protein...
LOC643677             0.005   hypothetical protein LOC643677 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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