Guide to the Human Genome
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Name: MICALL2 Sequence: fasta or formatted (904aa) NCBI GI: 33667117
Description:

MICAL-like 2 isoform 1

Referenced in:

LIM Domain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6        105           4
 C cysteine            1.5         14           1
 D aspartate           3.8         34           2
 E glutamate           6.6         60           3
 F phenylalanine       1.4         13           2
 G glycine             6.0         54           3
 H histidine           1.8         16           1
 I isoleucine          1.8         16           1
 K lysine              5.2         47           2
 L leucine             8.7         79           3
 M methionine          1.5         14           1
 N asparagine          2.2         20           2
 P proline            11.4        103           3
 Q glutamine           5.1         46           2
 R arginine            8.5         77           4
 S serine             10.7         97           4
 T threonine           4.8         43           2
 V valine              5.0         45           2
 W tryptophan          1.1         10           1
 Y tyrosine            1.2         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MICAL-like 2 isoform 1 
MICALL1               0.221   molecule interacting with Rab13 
MICAL3                0.068   microtubule associated monoxygenase, calponin and L...
MICAL3                0.068   microtubule associated monoxygenase, calponin and L...
MICAL1                0.059   microtubule associated monoxygenase, calponin and L...
MICAL1                0.059   microtubule associated monoxygenase, calponin and L...
MICAL2                0.053   microtubule associated monoxygenase, calponin and LIM...
SPTBN4                0.052   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
SPTBN1                0.050   spectrin, beta, non-erythrocytic 1 isoform 2 
SPTBN1                0.050   spectrin, beta, non-erythrocytic 1 isoform 1 
ACTN2                 0.049   actinin, alpha 2 
SPTBN2                0.048   spectrin, beta, non-erythrocytic 2 
ACTN3                 0.048   actinin, alpha 3 
MICAL3                0.048   microtubule associated monoxygenase, calponin and L...
ACTN1                 0.046   actinin, alpha 1 isoform c 
ACTN1                 0.046   actinin, alpha 1 isoform a 
ACTN1                 0.046   actinin, alpha 1 isoform b 
MICALCL               0.045   MICAL C-terminal like 
SPTB                  0.044   spectrin beta isoform a 
SPTB                  0.044   spectrin beta isoform b 
ACTN4                 0.044   actinin, alpha 4 
EHBP1L1               0.044   tangerin 
EHBP1                 0.043   EH domain binding protein 1 isoform 3 
EHBP1                 0.043   EH domain binding protein 1 isoform 3 
EHBP1                 0.043   EH domain binding protein 1 isoform 2 
EHBP1                 0.043   EH domain binding protein 1 isoform 1 
NACA                  0.042   nascent polypeptide-associated complex alpha subuni...
SPTBN5                0.040   spectrin, beta, non-erythrocytic 5 
SYNE2                 0.039   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.039   spectrin repeat containing, nuclear envelope 2 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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