TMEM88B 19105

Name: TMEM88B	Sequence: fasta or formatted (451aa)		NCBI GI: 239747203
Description: PREDICTED: hypothetical protein LOC643965		Not currently referenced in the text
Other entries for this name: alt prot {163aa} hypothetical protein LOC643965 alt prot {487aa} PREDICTED: hypothetical protein LOC643965
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.0 54 4 C cysteine 2.7 12 1 D aspartate 1.3 6 1 E glutamate 4.2 19 4 F phenylalanine 0.9 4 1 G glycine 12.2 55 4 H histidine 3.8 17 1 I isoleucine 0.7 3 1 K lysine 0.7 3 1 L leucine 9.5 43 3 M methionine 1.1 5 1 N asparagine 0.4 2 1 P proline 11.5 52 2 Q glutamine 8.6 39 3 R arginine 11.8 53 3 S serine 6.7 30 2 T threonine 3.3 15 2 V valine 7.1 32 2 W tryptophan 1.1 5 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC643965 TMEM88B 0.924 PREDICTED: hypothetical protein LOC643965 TMEM88B 0.184 hypothetical protein LOC643965 LOC100293296 0.109 PREDICTED: hypothetical protein LOC100293596 0.023 PREDICTED: similar to mucin SPTBN4 0.022 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SRRM2 0.022 splicing coactivator subunit SRm300 FLJ37078 0.022 hypothetical protein LOC222183 LOC100134702 0.021 PREDICTED: similar to mucin LOC100288382 0.021 PREDICTED: hypothetical protein XP_002342213 SYN1 0.021 synapsin I isoform Ia SYN1 0.021 synapsin I isoform Ib TTBK1 0.019 tau tubulin kinase 1 LOC100292934 0.018 PREDICTED: hypothetical protein LOC100290359 0.018 PREDICTED: hypothetical protein XP_002346414 LOC100288496 0.018 PREDICTED: hypothetical protein XP_002342747 LOC100287202 0.018 PREDICTED: hypothetical protein XP_002342114 MICALL1 0.017 molecule interacting with Rab13 C9orf140 0.017 tumor specificity and mitosis phase-dependent expre... LOC729199 0.017 PREDICTED: hypothetical protein LOC100294444 0.017 PREDICTED: similar to family with sequence similari... LOC100129463 0.017 PREDICTED: hypothetical protein LOC100129463 0.017 PREDICTED: hypothetical protein LOC100129463 0.017 PREDICTED: hypothetical protein FAM48B2 0.017 family with sequence similarity 48, member B2 [Homo... SCRIB 0.016 scribble isoform a POU6F2 0.016 POU domain, class 6, transcription factor 2 LOC100292172 0.016 PREDICTED: hypothetical protein FLJ22184 0.016 PREDICTED: hypothetical protein FLJ22184 LOC100289763 0.016 PREDICTED: hypothetical protein XP_002347867 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.