Guide to the Human Genome
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Name: GRIN3A Sequence: fasta or formatted (1115aa) NCBI GI: 223278356
Description:

glutamate receptor, ionotropic, N-methyl-D-aspartate 3A

Referenced in:

Glutamate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         62           2
 C cysteine            1.8         20           2
 D aspartate           4.2         47           2
 E glutamate           5.5         61           2
 F phenylalanine       4.7         52           2
 G glycine             6.3         70           2
 H histidine           3.1         35           2
 I isoleucine          5.4         60           2
 K lysine              3.9         43           2
 L leucine            11.7        131           3
 M methionine          2.7         30           2
 N asparagine          3.9         44           2
 P proline             6.0         67           3
 Q glutamine           4.1         46           2
 R arginine            5.8         65           3
 S serine              8.7         97           4
 T threonine           6.1         68           2
 V valine              6.1         68           3
 W tryptophan          2.2         24           2
 Y tyrosine            2.2         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, ionotropic, N-methyl-D-aspartat... 
GRIN3B                0.412   glutamate receptor, ionotropic, N-methyl-D-aspartate...
GRIN2B                0.124   N-methyl-D-aspartate receptor subunit 2B precursor ...
GRIN2A                0.122   N-methyl-D-aspartate receptor subunit 2A isoform 2 ...
GRIN2A                0.122   N-methyl-D-aspartate receptor subunit 2A isoform 1 ...
GRIN2A                0.122   N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...
GRIN2C                0.112   N-methyl-D-aspartate receptor subunit 2C precursor [...
GRIN2D                0.112   N-methyl-D-aspartate receptor subunit 2D precursor ...
GRIN1                 0.101   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.101   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.101   NMDA receptor 1 isoform NR1-2 precursor 
GRIK1                 0.061   glutamate receptor, ionotropic, kainate 1 isoform 1 p...
GRIK1                 0.061   glutamate receptor, ionotropic, kainate 1 isoform 2 ...
GRIK2                 0.060   glutamate receptor, ionotropic, kainate 2 isoform 1 ...
GRIA2                 0.059   glutamate receptor, ionotropic, AMPA 2 isoform 3 [H...
GRIA2                 0.059   glutamate receptor, ionotropic, AMPA 2 isoform 1 pre...
GRIK2                 0.059   glutamate receptor, ionotropic, kainate 2 isoform 2 ...
GRIA1                 0.059   glutamate receptor, ionotropic, AMPA 1 isoform 2 [H...
GRIA2                 0.058   glutamate receptor, ionotropic, AMPA 2 isoform 2 pr...
GRIA3                 0.057   glutamate receptor, ionotrophic, AMPA 3 isoform 1 p...
GRIK3                 0.057   glutamate receptor, ionotropic, kainate 3 precursor ...
GRIA1                 0.057   glutamate receptor, ionotropic, AMPA 1 isoform 1 [H...
GRIA3                 0.055   glutamate receptor, ionotrophic, AMPA 3 isoform 2 p...
GRID2                 0.055   glutamate receptor, ionotropic, delta 2 
GRIA4                 0.055   glutamate receptor, ionotrophic, AMPA 4 isoform 1 p...
GRIK4                 0.054   glutamate receptor KA1 precursor 
GRIK5                 0.054   glutamate receptor KA2 precursor 
GRIA4                 0.053   glutamate receptor, ionotrophic, AMPA 4 isoform 2 p...
GRID1                 0.049   glutamate receptor, ionotropic, delta 1 precursor [H...
RIN1                  0.008   ras inhibitor RIN1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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