LEMD2 25336

Name: LEMD2	Sequence: fasta or formatted (503aa)		NCBI GI: 31044432
Description: LEM domain containing 2 isoform 1		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [201aa] LEM domain containing 2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 56 3 C cysteine 1.4 7 1 D aspartate 4.8 24 1 E glutamate 8.7 44 4 F phenylalanine 2.2 11 2 G glycine 6.0 30 1 H histidine 1.0 5 1 I isoleucine 3.0 15 2 K lysine 3.8 19 2 L leucine 11.9 60 3 M methionine 2.0 10 1 N asparagine 2.0 10 1 P proline 6.4 32 2 Q glutamine 3.2 16 1 R arginine 11.5 58 3 S serine 7.2 36 4 T threonine 3.2 16 2 V valine 5.4 27 2 W tryptophan 3.2 16 2 Y tyrosine 2.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LEM domain containing 2 isoform 1 LEMD2 0.389 LEM domain containing 2 isoform 2 LEMD3 0.169 LEM domain containing 3 NOM1 0.017 nucleolar protein with MIF4G domain 1 LOC100290372 0.017 PREDICTED: hypothetical protein XP_002346788 LOC100288606 0.017 PREDICTED: hypothetical protein XP_002342652 LOC729370 0.016 PREDICTED: hypothetical protein LEMD1 0.015 LEM domain containing 1 LOC100132345 0.014 PREDICTED: hypothetical protein IK 0.014 RED protein LOC100291779 0.014 PREDICTED: hypothetical protein XP_002345879 LOC100287281 0.014 PREDICTED: hypothetical protein LOC100287281 0.014 PREDICTED: hypothetical protein XP_002342581 LOC100130360 0.013 PREDICTED: hypothetical protein SRRM1 0.013 serine/arginine repetitive matrix 1 FLJ22184 0.012 PREDICTED: hypothetical protein LOC80164 DDN 0.012 dendrin SNRNP70 0.012 U1 small nuclear ribonucleoprotein 70 kDa NFKBIE 0.012 nuclear factor of kappa light polypeptide gene enhan... LOC100289408 0.012 PREDICTED: hypothetical protein LOC100289408 0.012 PREDICTED: hypothetical protein XP_002344217 SYDE1 0.012 synapse defective 1, Rho GTPase, homolog 1 ARMCX2 0.012 ALEX2 protein ARMCX2 0.012 ALEX2 protein HCN2 0.011 hyperpolarization activated cyclic nucleotide-gated... FLJ22184 0.011 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.011 PREDICTED: hypothetical protein FLJ22184 LOC100130503 0.011 PREDICTED: hypothetical protein TAF4 0.011 TBP-associated factor 4 BCLAF1 0.011 BCL2-associated transcription factor 1 isoform 3 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.