LOC100287848 16693

Name: LOC100287848	Sequence: fasta or formatted (245aa)		NCBI GI: 239741024
Description: PREDICTED: hypothetical protein XP_002342070		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 18 2 C cysteine 1.6 4 1 D aspartate 2.0 5 1 E glutamate 5.3 13 1 F phenylalanine 0.8 2 1 G glycine 17.6 43 2 H histidine 3.7 9 1 I isoleucine 0.8 2 1 K lysine 1.2 3 1 L leucine 10.6 26 3 M methionine 1.2 3 1 N asparagine 0.4 1 1 P proline 11.8 29 2 Q glutamine 3.3 8 1 R arginine 9.4 23 2 S serine 6.9 17 2 T threonine 3.3 8 1 V valine 10.6 26 7 W tryptophan 1.2 3 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342070 LOC100290604 1.000 PREDICTED: hypothetical protein XP_002346941 LOC100292291 0.975 PREDICTED: hypothetical protein COL1A1 0.045 alpha 1 type I collagen preproprotein COL11A2 0.045 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.045 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.045 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL16A1 0.043 alpha 1 type XVI collagen precursor COL1A2 0.039 alpha 2 type I collagen PPP1R10 0.039 protein phosphatase 1, regulatory subunit 10 COL9A3 0.039 alpha 3 type IX collagen COL10A1 0.037 type X collagen alpha 1 precursor LOC100293055 0.037 PREDICTED: similar to COL22A1 protein COL27A1 0.037 collagen, type XXVII, alpha 1 COL28A1 0.037 collagen, type XXVIII precursor COL3A1 0.035 collagen type III alpha 1 preproprotein COL17A1 0.035 alpha 1 type XVII collagen COL22A1 0.035 collagen, type XXII, alpha 1 COL7A1 0.035 alpha 1 type VII collagen precursor LOC643355 0.033 PREDICTED: hypothetical protein LOC643355 0.033 PREDICTED: hypothetical protein COLEC12 0.033 collectin sub-family member 12 COL5A2 0.031 alpha 2 type V collagen preproprotein COL13A1 0.031 alpha 1 type XIII collagen isoform 19 COL13A1 0.031 alpha 1 type XIII collagen isoform 15 COL13A1 0.031 alpha 1 type XIII collagen isoform 13 COL13A1 0.031 alpha 1 type XIII collagen isoform 12 COL13A1 0.031 alpha 1 type XIII collagen isoform 7 COL13A1 0.031 alpha 1 type XIII collagen isoform 6 COL5A1 0.031 alpha 1 type V collagen preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.