Search of human proteins with 239740641

Search of human proteins with 239740641

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239740641 PREDICTED: hypothetical protein [Homo sapiens]
         (107 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239740641 PREDICTED: hypothetical protein [Homo sapiens]           236   4e-63
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    41   2e-04
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 40   5e-04
gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]        39   7e-04
gi|122937321 UNC homeobox [Homo sapiens]                               39   0.001
gi|163965366 nascent polypeptide-associated complex alpha subuni...    39   0.001
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       38   0.002
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                38   0.002
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]           38   0.002
gi|7706687 Enah/Vasp-like [Homo sapiens]                               37   0.003
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    37   0.003
gi|56549117 dynamin 1 isoform 2 [Homo sapiens]                         37   0.003
gi|59853099 dynamin 1 isoform 1 [Homo sapiens]                         37   0.003
gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo sa...    37   0.004
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    36   0.006
gi|124430752 kinesin family member 26B [Homo sapiens]                  36   0.006
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    35   0.010
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s...    35   0.010
gi|58331144 proline rich region 18 [Homo sapiens]                      35   0.010
gi|55743138 ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...    35   0.013
gi|4506735 ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...    35   0.013
gi|171543895 ataxin 2 [Homo sapiens]                                   35   0.017
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ...    35   0.017
gi|38683860 insulin receptor substrate 2 [Homo sapiens]                35   0.017
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               35   0.017
gi|148536864 SWI/SNF-related matrix-associated actin-dependent r...    35   0.017
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       35   0.017
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       35   0.017
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s...    35   0.017
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]    35   0.017

>gi|239740641 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  236 bits (601), Expect = 4e-63
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MTPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRP 60
           MTPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRP
Sbjct: 1   MTPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRP 60

Query: 61  ARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE 107
           ARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE
Sbjct: 61  ARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE 107


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 60  PARPSSRRGSPGPAPPPGG-PLASPRRGGFPPDP-ALTRPGLGQGQGP 105
           PA  S+  G+P P PP  G P   P+ GG PP P A+  PG G  QGP
Sbjct: 155 PAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGP 202



 Score = 33.1 bits (74), Expect = 0.050
 Identities = 31/103 (30%), Positives = 39/103 (37%), Gaps = 15/103 (14%)

Query: 2   TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRPA 61
           TPP+   P     G G     T    + S+P G          P  +G+ +T  Q   P 
Sbjct: 135 TPPTSGAPP----GSGPGPTPTPPPAVTSAPPGAPPPT-----PPSSGVPTTPPQAGGPP 185

Query: 62  RPSSRRGSPGPAPP----PGGPLASPRRGGFPP--DPALTRPG 98
            P +    PGP P     PGGP      GG  P   P L+ PG
Sbjct: 186 PPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPG 228



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 43  KVPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQG 102
           K P P        Q   P +P  ++  P P  PP  P    ++   PP    ++P + QG
Sbjct: 57  KPPIPPPPPHQQQQQPPPQQPPPQQ--PPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQG 114

Query: 103 QGP 105
            GP
Sbjct: 115 PGP 117



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 56  QWLRPARPSSRRGSP----GPAPPPGGPLASPRRGGFPP-DPALTRPGLGQGQGP 105
           Q  +P  P      P    GP P PG   A P     PP  P  +    G G GP
Sbjct: 95  QQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGP 149


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 12/80 (15%)

Query: 38  AAHFWKVPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLASPRRG----------- 86
           A  F + P   GL     + L P  P  R   P P PPPG P   P RG           
Sbjct: 438 APPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPP 497

Query: 87  GFPPD-PALTRPGLGQGQGP 105
           G PP  P + RP L    GP
Sbjct: 498 GIPPPRPGMMRPPLVPPLGP 517



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 12/60 (20%)

Query: 49  GLVSTSSQWLRPAR---PSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGP 105
           G  + SSQ   P +   PS  +  P P PPP GP         PP P L  PG   G  P
Sbjct: 382 GTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGP---------PPAPPLRPPGPPTGLPP 432



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 44  VPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGP--LASPRRGGF-PPDPALTRPGLG 100
           +P P  L    +  LRP  P +  G P P PPPG P  L  P   G   P P L  PG  
Sbjct: 407 MPGPPPLGPPPAPPLRPPGPPT--GLP-PGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPP 463

Query: 101 QGQGP 105
            G+ P
Sbjct: 464 PGRPP 468



 Score = 29.3 bits (64), Expect = 0.71
 Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 8/48 (16%)

Query: 62  RPSSRRGSPGPAP---PPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           RP    G  GP P   PPG P   P   G PP P    PGL  G  PR
Sbjct: 443 RPPGMPGLRGPLPRLLPPGPPPGRP--PGPPPGPP---PGLPPGPPPR 485


>gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
          Length = 1302

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 3   PPSPSLPHLRVRGLG---RPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLR 59
           P +P  PH    G     +PS   ++ Y  + P  ++  +     PSP  L S S Q + 
Sbjct: 306 PSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALAS-SPQAVP 364

Query: 60  PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQG 104
            +    R  S GP  PP  P A+ RR    P      P LG   G
Sbjct: 365 ASSSRQRPSSTGPPLPPASPSATSRR----PSSLRISPSLGASGG 405


>gi|122937321 UNC homeobox [Homo sapiens]
          Length = 531

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 3   PPSPSLP-----HLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQW 57
           PP+P++P              P       +   SP+   +       P+P   +++++  
Sbjct: 410 PPAPAVPPAPPAQASFGAFSGPGGAPDSAFARRSPDAVASPGAPAPAPAPFRDLASAAAT 469

Query: 58  LRPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPA-------LTRPGLGQGQGPRE 107
                  +  G+ GPAPPP  P  SPR G  PP PA       +  PG   G  P E
Sbjct: 470 EGGGGDCADAGTAGPAPPPPAP--SPRPGPRPPSPAEEPATCGVPEPGAAAGPSPPE 524


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 37/103 (35%), Positives = 43/103 (41%), Gaps = 28/103 (27%)

Query: 2    TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEG--TTTAAHFWKVPSPAGLVSTSSQWLR 59
            TPPSP        GL  PS           P+G  TT AA     PSP G ++T S    
Sbjct: 1201 TPPSPK------GGLATPS-----------PKGAPTTPAA---TPPSPKGGLATPSPKGA 1240

Query: 60   PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQG 102
            P  P++      P  P GGP   P +G  P  PA T P L  G
Sbjct: 1241 PTTPAAT-----PPSPKGGPATPPPKGA-PTPPAATPPSLKGG 1277



 Score = 35.8 bits (81), Expect = 0.008
 Identities = 33/100 (33%), Positives = 38/100 (38%), Gaps = 8/100 (8%)

Query: 2    TPPSPS-LPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRP 60
            TPPSP   P       G P   T       SP+G          P+P      S +   P
Sbjct: 1039 TPPSPKGSPAATPLPKGAP---TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG-GP 1094

Query: 61   ARPSSRRGSPGPA---PPPGGPLASPRRGGFPPDPALTRP 97
            A PS +     PA   P P G LA+P   G P  PA T P
Sbjct: 1095 ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPP 1134



 Score = 35.8 bits (81), Expect = 0.008
 Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 28/98 (28%)

Query: 2    TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEG--TTTAAHFWKVPSPAGLVSTSSQWLR 59
            TPPSP        GL  PS           P+G  TT AA     PSP G ++T S    
Sbjct: 1178 TPPSPK------GGLATPS-----------PKGAPTTPAA---TPPSPKGGLATPSPKGA 1217

Query: 60   PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRP 97
            P  P++        P P G LA+P   G P  PA T P
Sbjct: 1218 PTTPAAT------PPSPKGGLATPSPKGAPTTPAATPP 1249



 Score = 34.7 bits (78), Expect = 0.017
 Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 45   PSPAGLVSTSSQWLRP----ARPSSRRGSPGPAPPPGGP----LASPRRGGFPPDPALTR 96
            PSP G  +TS     P    A P S +GSPG  PP G P    +  P   G P  PA T 
Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354

Query: 97   PGLG 100
               G
Sbjct: 1355 SSKG 1358



 Score = 33.9 bits (76), Expect = 0.029
 Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 28/98 (28%)

Query: 2    TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEG--TTTAAHFWKVPSPAGLVSTSSQWLR 59
            TPPSP        GL  P            P+G  TT AA     PSP G ++T S    
Sbjct: 1155 TPPSPK------GGLATPP-----------PKGAPTTPAA---TPPSPKGGLATPSPKGA 1194

Query: 60   PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRP 97
            P  P++        P P G LA+P   G P  PA T P
Sbjct: 1195 PTTPAAT------PPSPKGGLATPSPKGAPTTPAATPP 1226



 Score = 33.9 bits (76), Expect = 0.029
 Identities = 38/116 (32%), Positives = 45/116 (38%), Gaps = 41/116 (35%)

Query: 2    TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEG--TTTAAHFWKVPSPAGLVSTSSQWLR 59
            TPPSP        GL  PS           P+G  TT AA     PSP G  +T      
Sbjct: 1224 TPPSPK------GGLATPS-----------PKGAPTTPAA---TPPSPKGGPATPPPKGA 1263

Query: 60   PARPSS-------------RRGSPGPA-----PPPGGPLASPRRGGFPPDPALTRP 97
            P  P++              +G+P PA      P GGP  SP +G  P  PA T P
Sbjct: 1264 PTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGA-PTPPAATPP 1318



 Score = 33.1 bits (74), Expect = 0.050
 Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 7/100 (7%)

Query: 2    TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRPA 61
            TPPSP          G P   T       SP+G          P+P  +   S +    A
Sbjct: 969  TPPSPKGGPATPSPKGAP---TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAA 1025

Query: 62   RPSSRRGSPGPAPPP----GGPLASPRRGGFPPDPALTRP 97
             P  +  S  PA  P    G P A+P   G P  PA T P
Sbjct: 1026 TPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP 1065



 Score = 32.0 bits (71), Expect = 0.11
 Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 28/98 (28%)

Query: 2    TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEG--TTTAAHFWKVPSPAGLVSTSSQWLR 59
            TPPSP        GL  P            P+G  TT AA     PSP G ++T      
Sbjct: 1132 TPPSPK------GGLATPP-----------PKGAPTTPAA---TPPSPKGGLATPPPKGA 1171

Query: 60   PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRP 97
            P  P++        P P G LA+P   G P  PA T P
Sbjct: 1172 PTTPAAT------PPSPKGGLATPSPKGAPTTPAATPP 1203



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 24/115 (20%)

Query: 4   PSPSLPHL-------RVRGLGRPS-----------CCTWQVYLCSSPEGTTTAAHFWKVP 45
           PSPSLP         +V G+   S           C T      ++     T  +    P
Sbjct: 735 PSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSP 794

Query: 46  SPAGLVSTSSQWLRPARPSSRRGSPGPAPPPG--GPLASPRRGGFPPDPALTRPG 98
           SP G VS S Q     RP +++GS GP  P G      SP    F P+ +L+  G
Sbjct: 795 SPLG-VSVSPQ---TKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQG 845



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 20/85 (23%)

Query: 31   SPEGTTTAAHFWKVPSPAGLVSTSSQWLRP----ARPSSRRGSPG--------------P 72
            SP+G  T       PSP G  +T S    P    A P S +G P               P
Sbjct: 935  SPKGAPTPPAATP-PSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATP 993

Query: 73   APPPGGPLASPRRGGFPPDPALTRP 97
              P GGP A+P   G P  PA+T P
Sbjct: 994  PSPKGGP-ATPSPKGAPTPPAVTPP 1017



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 29/118 (24%)

Query: 1    MTPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVP---SPA------GLV 51
            MTPPSP       RG   PS           P+G  T+     +    +PA      G  
Sbjct: 1384 MTPPSPK------RGPAIPS-----------PKGDPTSPAVIPLSPKKAPATPVTREGAA 1426

Query: 52   STSSQWLRP--ARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE 107
            + S   L P    P S + +P  + P GGP A+P   G P  PA+T P   +   P++
Sbjct: 1427 TPSKGDLTPPAVTPVSLKKAPATSAPKGGP-ATPSSKGDPTLPAVTPPSPKEPPAPKQ 1483



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 33/104 (31%), Positives = 36/104 (34%), Gaps = 20/104 (19%)

Query: 2   TPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRPA 61
           TPPSP       +G   PS  T       SP+G T        PS   L         PA
Sbjct: 857 TPPSP-------KGAPTPSAVT-----PLSPKGVTLPPKETPTPSVVNLPFPKEGPATPA 904

Query: 62  ---RPSSRRGSPGP-----APPPGGPLASPRRGGFPPDPALTRP 97
               P+    S  P      P P G  ASP   G P  PA T P
Sbjct: 905 PKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPP 948



 Score = 28.9 bits (63), Expect = 0.93
 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 45   PSPAGLVSTSSQWLRP----ARPSSRRGSPGPAPPPGGP-------------LASPRRGG 87
            PSP G ++T      P    A P S +G     PP G P             LA+P   G
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKG 1170

Query: 88   FPPDPALTRP 97
             P  PA T P
Sbjct: 1171 APTTPAATPP 1180



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 19/62 (30%), Positives = 25/62 (40%)

Query: 44   VPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQ 103
            VPSP    +  +    PA PSS+  S  PA  P     +P        PA+T P   +  
Sbjct: 1555 VPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAP 1614

Query: 104  GP 105
             P
Sbjct: 1615 TP 1616



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 21/110 (19%)

Query: 1    MTPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLR- 59
            +TPPSP          G P   T       SP+G+         P+P  +   S +    
Sbjct: 1292 VTPPSPKGGPATSPPKGAP---TPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPT 1348

Query: 60   -PARPSSRRGSP-------GPAPP------PGGPL---ASPRRGGFPPDP 92
             PA   S +G P       GP PP       GGP     SP+RG   P P
Sbjct: 1349 LPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP 1398


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 63   PSSRRGSPGPAPPPG--GPLASPRRGGFPPDPALT-RPGLGQGQGP 105
            PS   G PGP  PPG  GP  SP   GFP DP     PG     GP
Sbjct: 1316 PSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP 1361



 Score = 29.3 bits (64), Expect = 0.71
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 60   PARPSSRRGSPGPAPPPGG---PLASPRRG--GFPPDPALTRPGLGQGQGPR 106
            P  PS   G+ GP  PPGG   P A   +G  G   +P L  PG G   GP+
Sbjct: 1256 PRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGL--PGEGGPPGPK 1305



 Score = 29.3 bits (64), Expect = 0.71
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 60   PARPSSRRGSPGPAPPPG--GPLASPRRGGFPPDPALTRPGLGQG 102
            P+ P  +RG PGPA P G  G   +    G    P  T P   QG
Sbjct: 1385 PSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG 1429



 Score = 29.3 bits (64), Expect = 0.71
 Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)

Query: 45   PSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGP 79
            P P G   +S     P  P    G PGP  PPG P
Sbjct: 1539 PGPKGAKGSSG----PTGPKGEAGHPGPPGPPGPP 1569



 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 12/47 (25%)

Query: 60  PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           PA P    G PGP  PPG        GG   +P    P     QGPR
Sbjct: 560 PAGPMGLTGRPGPVGPPGS-------GGLKGEPGDVGP-----QGPR 594



 Score = 28.9 bits (63), Expect = 0.93
 Identities = 26/88 (29%), Positives = 29/88 (32%), Gaps = 28/88 (31%)

Query: 45   PSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPG-----------------GPLASPRRG- 86
            P P G+V           P   RG PGP  PPG                 GP   P +  
Sbjct: 993  PGPPGVVGPQGP-TGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDG 1051

Query: 87   -----GFPPDPALTRP----GLGQGQGP 105
                 GFP D  L  P    GL   +GP
Sbjct: 1052 PPGLRGFPGDRGLPGPVGALGLKGNEGP 1079



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 67  RGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           RG PGP+ PPG P     RG    D  +   GL    GPR
Sbjct: 645 RGDPGPSGPPGPPGDDGERG---DDGEVGPRGLPGEPGPR 681



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)

Query: 60  PARPSSRRGSPGPA-----PPPGGPLASPRRGGFPPDP 92
           PA P   RG  GP      P P GP   P + G P  P
Sbjct: 941 PAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHP 978



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 9/56 (16%)

Query: 60  PARPSSR---RGSPGPAPPPG--GPLASPRRGGFP----PDPALTRPGLGQGQGPR 106
           P  P  R    G PGP  PPG  G L  P   G+P    P  ++  PG     G +
Sbjct: 842 PEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEK 897



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 60  PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P  P   +G PGPA  PG      RRG    D A   PG    +G R
Sbjct: 590 PQGPRGVQGPPGPAGKPG------RRGRAGSDGARGMPGQTGPKGDR 630



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 7/67 (10%)

Query: 32   PEGTTTAAHFWKVPSPAGLVSTSSQWLRPARPSS-----RRGSPGPAPPPGGPLASPRRG 86
            P+G+     F   P P G    + Q   P          + GSPGP   P GP   P + 
Sbjct: 1334 PKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEP-GPSGPPGKR 1392

Query: 87   GFPPDPA 93
            G PP PA
Sbjct: 1393 G-PPGPA 1398



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 45   PSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPG--GPLASP-RRGGFPPDPALTRPGL 99
            P P GL         P       GSPGP  PPG  GP   P  +G   P      PGL
Sbjct: 1434 PGPDGLRGIPG----PVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGL 1487


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 60  PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGP 105
           P  P   +G PGP   PG P   P   GFP  P + +PGL    GP
Sbjct: 69  PLLPMDLKGEPGPPGKPG-PRGPPGPPGFPGKPGMGKPGLHGQPGP 113



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 8/47 (17%)

Query: 68  GSPGPAPPPG-------GPLASPRRGGFPPDPALT-RPGLGQGQGPR 106
           G PGPA PPG       GP   P + G P  P L   PG+   QG R
Sbjct: 109 GQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR 155



 Score = 29.3 bits (64), Expect = 0.71
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 10/68 (14%)

Query: 44  VPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLASPRRG-----GFPPDPALTRP- 97
           VP   GL         P  P+  +G PG    PGGP  +   G     G P  P L  P 
Sbjct: 407 VPGERGLPGAHG----PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPS 462

Query: 98  GLGQGQGP 105
           G+   QGP
Sbjct: 463 GIPGLQGP 470



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 26/82 (31%)

Query: 45  PSPAGLVSTSSQWLRPARPSSR--------RGSPGPAPPPGGP----------------L 80
           P P GL   S   + P +P ++        +G PGP   PG P                 
Sbjct: 158 PGPPGLPGPSGITI-PGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLP 216

Query: 81  ASPRRGGFPPDPALTRP-GLGQ 101
            +P +GG P  P L  P GLG+
Sbjct: 217 GAPGQGGAPGPPGLPGPAGLGK 238



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 44  VPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDP 92
           VP  AGL         P  PS  +G PG   PPG  L  P   G P  P
Sbjct: 282 VPGAAGLPG-------PQGPSGAKGEPGTRGPPG--LIGPTGYGMPGLP 321


>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
          Length = 1006

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 20/66 (30%)

Query: 60  PARPSSRRGSPGPAPPPGGPLASPRR--------------------GGFPPDPALTRPGL 99
           P RP++  G PGPA PP    A+P R                     G  P P   RPG 
Sbjct: 714 PRRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGS 773

Query: 100 GQGQGP 105
           G G GP
Sbjct: 774 GSGSGP 779



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 60  PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQ-GQGPRE 107
           P+ PS+   SP P PPP  P       G  P+P  T    G    GP E
Sbjct: 43  PSPPSADVNSPPPLPPPTSPGGPKELEGQEPEPRPTEEEPGSPWSGPDE 91



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 63  PSSRR--GSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE 107
           P++RR    PGPA  P G  A P      P P     G G    P +
Sbjct: 610 PAARRPKAPPGPARAPPGQPAEPDAPRSSPGPGAREEGAGGAATPED 656



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 12/55 (21%)

Query: 45  PSPAGLVSTSSQWLRPARPSSRRG------SPGPAPPPGGPLASPRRGGFPPDPA 93
           PSPA   + S Q   P     R G       P P PPP  P A+P     PP PA
Sbjct: 900 PSPAPAPAASPQ---PGSRGPRDGLGPEPQEPPPGPPPS-PAAAPE--AVPPPPA 948


>gi|7706687 Enah/Vasp-like [Homo sapiens]
          Length = 418

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 52  STSSQWLRPARPSSRRGSP----GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE 107
           S +   L P  PSS   +P    GP PPP  P+  P  G  PP P     G  QG    E
Sbjct: 160 SATGPILPPGHPSSAASAPVSCSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDE 219


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 60  PARPSSRRGSP--------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE 107
           P RP    G P        GP P PG P   P +GG  P      PG  QG  P+E
Sbjct: 198 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQE 253



 Score = 33.9 bits (76), Expect = 0.029
 Identities = 17/44 (38%), Positives = 20/44 (45%)

Query: 63  PSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P     S GP P PG P   P +GG        RPG  +GQ P+
Sbjct: 62  PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQ 105



 Score = 33.5 bits (75), Expect = 0.038
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 45  PSPAGLVSTSSQWLRPARPSSR-----RGSPGPAPPPGGPLASPRRGGFPPDPALTRPGL 99
           P P G   +     RP +P  +       S GP P PG P   P +GG        RPG 
Sbjct: 81  PPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK 140

Query: 100 GQGQGPR 106
            +G  P+
Sbjct: 141 PEGPPPQ 147



 Score = 33.1 bits (74), Expect = 0.050
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 8/55 (14%)

Query: 60  PARPSSRRGSP--------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P RP    G P        GP P PG P   P +GG        RPG  +G  P+
Sbjct: 72  PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQ 126



 Score = 33.1 bits (74), Expect = 0.050
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 59  RPARPSSRRGS-PGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGP 105
           +P  P  + G+ P   PPPG P   P  GG P  P    P  G+ QGP
Sbjct: 245 KPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQP--LPPPAGKPQGP 290



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 8/55 (14%)

Query: 60  PARPSSRRGSP--------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P RP    G P        GP P PG P   P +GG        RPG  +G  P+
Sbjct: 114 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 168



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 8/55 (14%)

Query: 60  PARPSSRRGSP--------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P RP    G P        GP P PG P   P +GG        RPG  +G  P+
Sbjct: 156 PPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 210



 Score = 30.8 bits (68), Expect = 0.25
 Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 60  PARPSSRRGSP--------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P RP    G P        GP P PG P   P +GG         PG  +G  P+
Sbjct: 135 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQ 189



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 63  PSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQG 102
           P     S GP P PG P   P +GG        RPG  +G
Sbjct: 188 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG 227



 Score = 29.3 bits (64), Expect = 0.71
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 62  RPSSRRGSPG-----PAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           +P  RR   G       PPPG P   P +GG        RPG  +G  P+
Sbjct: 35  KPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQ 84



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 11/54 (20%)

Query: 60  PARPSSRRGSP--------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGP 105
           P RP    G P        GP P PG P   P + G  P      P  G+ QGP
Sbjct: 219 PPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQ---RPPPPGRPQGP 269



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 59  RPARPSSRRGSPGPAPPPGGPLASP--RRGGFPPDPALTRPGL-GQGQGPR 106
           RP  P   +G P P   P  PL  P  +  G PP P   RP    QGQ P+
Sbjct: 259 RPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309


>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
          Length = 851

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 27/56 (48%), Positives = 30/56 (53%), Gaps = 8/56 (14%)

Query: 47  PAGLVSTSS----QWLRPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPG 98
           PAG  S +S    Q   PA P +R GS GPAP P  P A    GG PP P  +RPG
Sbjct: 769 PAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGP--PPAGSALGGAPPVP--SRPG 820



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 11/57 (19%)

Query: 60  PARPSSRRGSPGP---------APP-PGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           PARP SR  +PGP         APP P  P ASP   G PP    +RP       PR
Sbjct: 790 PARPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDPFG-PPPQVPSRPNRAPPGVPR 845


>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
          Length = 864

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 27/56 (48%), Positives = 30/56 (53%), Gaps = 8/56 (14%)

Query: 47  PAGLVSTSS----QWLRPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPG 98
           PAG  S +S    Q   PA P +R GS GPAP P  P A    GG PP P  +RPG
Sbjct: 769 PAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGP--PPAGSALGGAPPVP--SRPG 820



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 14/59 (23%)

Query: 60  PARPSSRRGSPGP---------APP-PGGPLASPRRGGFPPD----PALTRPGLGQGQG 104
           PARP SR  +PGP         APP P  P ASP   G PP     P    PG+    G
Sbjct: 790 PARPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNRAPPGVPSRSG 848


>gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo
           sapiens]
          Length = 363

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 36/99 (36%), Positives = 42/99 (42%), Gaps = 13/99 (13%)

Query: 11  LRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRP----ARPSSR 66
           LRV G G     T + +L  SP G  T       P P+   S S +  RP    A+ SS+
Sbjct: 220 LRVSGSGEFVGLTLK-FLHPSPPGPPTPIRSVLAPQPS--TSNSQRLPRPQGAAAKSSSQ 276

Query: 67  RGSPGPAPPPGG--PLAS----PRRGGFPPDPALTRPGL 99
              P   P P    PL S    P RG  PPD   TR GL
Sbjct: 277 LPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGL 315


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 45  PSPAGLVSTSSQWL--RPARPSSRRGSP--GPAPPPGGPLASPRRGGFPPDPALTRPGLG 100
           P P G  S SSQ    +P  P  + G+   GP PPPG P   P +GG  P      P  G
Sbjct: 202 PPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP---PPPG 258

Query: 101 QGQGP 105
           + QGP
Sbjct: 259 KPQGP 263



 Score = 33.9 bits (76), Expect = 0.029
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 60  PARPSSRRGSP--GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGP 105
           P  PS + G+   GP PPPG P   P +GG  P      P  G+ QGP
Sbjct: 36  PQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGP---PPPGKPQGP 80



 Score = 33.1 bits (74), Expect = 0.050
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 45  PSPAGLVSTS--SQWLRPARPSSRRGSP--GPAPPPGGPLASPRRGGFPPDPALTRPGLG 100
           P P G  S S  S   +P  P  + G+   GP PPPG P   P +GG  P      P  G
Sbjct: 141 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGP---PPPG 197

Query: 101 QGQGP 105
           + QGP
Sbjct: 198 KPQGP 202



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 45  PSPAGLVSTS--SQWLRPARPSSRRGSP--GPAPPPGGPLASPRRGGFPPDPALTRPGLG 100
           P P G  S S  S   +P  P  + G+   GP PPPG P   P +GG  P      P  G
Sbjct: 80  PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGP---PPPG 136

Query: 101 QGQGP 105
           + QGP
Sbjct: 137 KPQGP 141



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 59  RPARPSSRRGS-PGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPRE 107
           +P  P  + G+ P   PPPG P   P +GG     A + PG  QG   +E
Sbjct: 239 KPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQE 288



 Score = 30.8 bits (68), Expect = 0.25
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 60  PARPSSRRGSP-------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P  P   +G P        P  PPG P   P +GG  P      PG  QG  P+
Sbjct: 71  PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 124



 Score = 30.8 bits (68), Expect = 0.25
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 60  PARPSSRRGSP-------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P  P   +G P        P  PPG P   P +GG  P      PG  QG  P+
Sbjct: 132 PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 185



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 7/54 (12%)

Query: 60  PARPSSRRGSP-------GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           P  P   +G P           PPG P   P +GG  P      PG  QG  P+
Sbjct: 193 PPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 246



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 59  RPARPSSRRGS-PGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           +P  P  + G+ P   PPPG P   P +G     P  + PG  QG  P+
Sbjct: 56  KPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR-SPPGKPQGPPPQ 103



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 59  RPARPSSRRGS-PGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           +P  P  + G+ P   PPPG P   P +G     P  + PG  QG  P+
Sbjct: 117 KPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPR-SPPGKPQGPPPQ 164


>gi|124430752 kinesin family member 26B [Homo sapiens]
          Length = 2108

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 31  SPEGTTTAAHFWKVPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLASPRRGGFPP 90
           +PEG  +A      PSP     TSS       PSS  GSPGPA  PG   +SP   G  P
Sbjct: 55  TPEGAGSALGSSGTPSPGS--GTSS-------PSSFTGSPGPA-SPGIGTSSPGSLGGSP 104

Query: 91  DPALTRPGLGQGQG 104
                 PG G G G
Sbjct: 105 GFGTGSPGSGSGGG 118


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 60  PARPSSRRGSPGPAPPP--GGPLASPRRG-GFPPDPALTRP 97
           P  P SR G P P PPP   GP   P RG G PP P    P
Sbjct: 278 PPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAP 318



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 12/44 (27%)

Query: 60  PARPSSRRGSPGPAPPPG-----GPLASPRRGGFPPDPALTRPG 98
           PA PSS     GP PPP      GP+A P     PP P    PG
Sbjct: 348 PALPSS--APSGPPPPPPSVLGVGPVAPP-----PPPPPPPPPG 384



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 60  PARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGL 99
           P  P+  RG+P P PP   P A+      PP P  +RP +
Sbjct: 300 PPPPARGRGAP-PPPPSRAPTAA------PPPPPPSRPSV 332



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 45  PSPAGLVSTSSQWLRPARPSSRRG----SPGPAPPPGGPLASPRRGGFPPD 91
           P P   + +S+    P  P S  G    +P P PPP  P   P   G P D
Sbjct: 344 PPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSD 394


>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
           sapiens]
          Length = 939

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 48  AGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPL---ASPRRGGFPPDPA-LTRPGLGQGQ 103
           A + S +S +  PA+P    G P   PPP  P    +SPR    PP P+ L RP  G  Q
Sbjct: 208 ASVYSAASPFYPPAQPPPPPGPPQQLPPPPAPAGSGSSPRADSKPPLPSKLPRPKAGPRQ 267


>gi|58331144 proline rich region 18 [Homo sapiens]
          Length = 295

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 47  PAGLVSTSSQWLRPARPSSRRGSPG------PAPPPGGPLASPRRGGFPPDPALTRPGLG 100
           P GL+S+S       RP +RRG PG      PAPP   P A P R   P   A  RP  G
Sbjct: 40  PEGLLSSSWPSATLKRPPARRG-PGLDRTQPPAPPGVSPQALPSRARAPATCAPPRPA-G 97

Query: 101 QGQGP 105
            G  P
Sbjct: 98  SGHSP 102


>gi|55743138 ribosomal protein S6 kinase, 90kDa, polypeptide 4
           isoform b [Homo sapiens]
          Length = 766

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 25/56 (44%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 41  FWKVPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLAS---PRRGGFPPDPA 93
           F K    A L     Q LR A  +SRRGSP PA P   P+AS   PRR   P  P+
Sbjct: 712 FLKSVENAPLAKRRKQKLRSAT-ASRRGSPAPANPGRAPVASKGAPRRANGPLPPS 766


>gi|4506735 ribosomal protein S6 kinase, 90kDa, polypeptide 4
           isoform a [Homo sapiens]
          Length = 772

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 25/56 (44%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 41  FWKVPSPAGLVSTSSQWLRPARPSSRRGSPGPAPPPGGPLAS---PRRGGFPPDPA 93
           F K    A L     Q LR A  +SRRGSP PA P   P+AS   PRR   P  P+
Sbjct: 718 FLKSVENAPLAKRRKQKLRSAT-ASRRGSPAPANPGRAPVASKGAPRRANGPLPPS 772


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 59  RPARPSSRRG---SPGP----APPPGGPLASPRRGGFPPDPALTRPGLGQGQG 104
           RPAR S R G   +PGP    APPP GP   P R   PP  +      G G G
Sbjct: 33  RPARRSGRGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGG 85


>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
            sapiens]
          Length = 1691

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 60   PARPS--SRRGSPGPAPPPGGPLASPRRG-----GFPPDPALTRPGLGQG 102
            P RP     RG PGPA PPG P  S  +G     GFP  P    P   QG
Sbjct: 1261 PGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQG 1310


>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
          Length = 1338

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 1    MTPPSPSLPHLRVRGLGRPSCCTWQVYLCSSPEGTTTAAHFWKVPSPAGLVSTSSQWLRP 60
            +TP SPS  H   R     S     V L  S EG          P       TS + L+P
Sbjct: 1158 VTPVSPSFAHNPKR---HNSASVENVSLRKSSEGGVGVG-----PGGGDEPPTSPRQLQP 1209

Query: 61   ARPSSRRGSPGPAPPPGGPLASPRRGGFP 89
            A P + +G P     PGG +  P  GG P
Sbjct: 1210 APPLAPQGRPWTPGQPGGLVGCPGSGGSP 1238


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 44   VPSPAGLVSTSSQW--LRPARPSSRRGSPGPAPPPGGPL 80
            +P P G   +   W    P  P   RG PGP  PPGGP+
Sbjct: 1584 LPGPKGDKGSRGDWGLQGPRGPPGPRGRPGPPGPPGGPI 1622



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 68  GSPGPAPPPGGP--LASPRRGGFPPDPAL 94
           G  GP  PPG P     P R GFP  P L
Sbjct: 946 GDEGPMGPPGAPGLEGQPGRKGFPGRPGL 974



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 22/77 (28%)

Query: 44  VPSPAGLVSTSSQWLRPARPSSR--RGSPGPAPPPGGPLASPRRGGFPPDPALTR----- 96
           +P P GL         P  P +R  RG PGP   PG P   P   G   DP L+      
Sbjct: 635 LPGPPGLPGL------PGIPGARGPRGPPGPYGNPGLP-GPPGAKGQKGDPGLSPGKAHD 687

Query: 97  --------PGLGQGQGP 105
                   PGL    GP
Sbjct: 688 GAKGDMGLPGLSGNPGP 704


>gi|148536864 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin d2 isoform 1 [Homo sapiens]
          Length = 531

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 31  SPEGTTTAAHFWKVPSPAGLVSTSSQWLRPARPSSRRGSPGPAP----PPGGPLASPRRG 86
           SP G   AA     P PAG        LR   P+   G PG A      P GP A  +R 
Sbjct: 15  SPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFRPMGPAGPAAQYQRP 74

Query: 87  GFPPDPALTRPGLGQG 102
           G  P   +   GL  G
Sbjct: 75  GMSPGNRMPMAGLQVG 90


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 11/56 (19%)

Query: 63  PSSRRGSPGPAPPPGGPLASPRRGG---FPPDP--------ALTRPGLGQGQGPRE 107
           P     SP P PPPG P A     G    PPDP        +L+RPG  +G    E
Sbjct: 677 PQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGE 732



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 31/133 (23%)

Query: 2   TPPSPSLPHLRVRGLGRPSCCTWQVY-LCSSPEGTTTAAH--FWKVPSPAGLVSTS-SQW 57
           TPP P  P  R   L RP             P G+T  ++    + P  + LV TS S  
Sbjct: 705 TPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVRTSPSVT 764

Query: 58  LRPARPSSRRGS-----------------------PGPAPPPGGPLASPRRGGFPPDPAL 94
             PAR + R  S                       P P PPP      P+ G   P    
Sbjct: 765 PTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGP---- 820

Query: 95  TRPGLGQGQGPRE 107
            R  L +  GP E
Sbjct: 821 RRRTLSEPAGPSE 833



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 68  GSPGPAPPPGGPLASPRRGGFPPDPALTRP 97
           G     P P  PL SP  G  PP  +L +P
Sbjct: 928 GVASATPGPAAPLPSPTPGESPPASSLPQP 957


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 11/56 (19%)

Query: 63  PSSRRGSPGPAPPPGGPLASPRRGG---FPPDP--------ALTRPGLGQGQGPRE 107
           P     SP P PPPG P A     G    PPDP        +L+RPG  +G    E
Sbjct: 759 PQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGE 814



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 31/133 (23%)

Query: 2   TPPSPSLPHLRVRGLGRPSCCTWQVY-LCSSPEGTTTAAH--FWKVPSPAGLVSTS-SQW 57
           TPP P  P  R   L RP             P G+T  ++    + P  + LV TS S  
Sbjct: 787 TPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVRTSPSVT 846

Query: 58  LRPARPSSRRGS-----------------------PGPAPPPGGPLASPRRGGFPPDPAL 94
             PAR + R  S                       P P PPP      P+ G   P    
Sbjct: 847 PTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGP---- 902

Query: 95  TRPGLGQGQGPRE 107
            R  L +  GP E
Sbjct: 903 RRRTLSEPAGPSE 915



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 68   GSPGPAPPPGGPLASPRRGGFPPDPALTRP 97
            G     P P  PL SP  G  PP  +L +P
Sbjct: 1010 GVASATPGPAAPLPSPTPGESPPASSLPQP 1039


>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
            sapiens]
          Length = 1690

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 60   PARPS--SRRGSPGPAPPPGGPLASPRRG-----GFPPDPALTRPGLGQG 102
            P RP     RG PGPA PPG P  S  +G     GFP  P    P   QG
Sbjct: 1260 PGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQG 1309


>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
          Length = 166

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 6/35 (17%)

Query: 71  GPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGP 105
           GP PP G P   P++GG PP P       G+ QGP
Sbjct: 83  GPPPPQGKPQGPPQQGGHPPPPQ------GRPQGP 111



 Score = 33.1 bits (74), Expect = 0.050
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 59  RPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           RP  P  + G P   PP G P   P++GG    P    PG  QG  P+
Sbjct: 107 RPQGPPQQGGHP--RPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQ 152



 Score = 32.0 bits (71), Expect = 0.11
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 8/47 (17%)

Query: 59  RPARPSSRRGSPGPAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGP 105
           +P  P  + G P   PP G P   P++GG P      RP  G+ QGP
Sbjct: 90  KPQGPPQQGGHP--PPPQGRPQGPPQQGGHP------RPPRGRPQGP 128



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 9/50 (18%)

Query: 59  RPARPSSRRGSPG--PAPPPGGPLASPRRGGFPPDPALTRPGLGQGQGPR 106
           RP  P  + G     P PPPG P   P +GG P  P        QGQ P+
Sbjct: 124 RPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPP-------QGQSPQ 166


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.137    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,890,615
Number of Sequences: 37866
Number of extensions: 588088
Number of successful extensions: 7697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 709
Number of HSP's that attempted gapping in prelim test: 4161
Number of HSP's gapped (non-prelim): 3659
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.