Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFR2 Sequence: fasta or formatted (939aa) NCBI GI: 130492454
Description:

zinc finger RNA binding protein 2 isoform 1

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [70aa] zinc finger RNA binding protein 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2        105           3
 C cysteine            2.4         23           1
 D aspartate           4.0         38           2
 E glutamate           6.5         61           3
 F phenylalanine       1.4         13           1
 G glycine             7.9         74           3
 H histidine           2.7         25           1
 I isoleucine          1.6         15           1
 K lysine              4.0         38           2
 L leucine             8.0         75           3
 M methionine          1.6         15           1
 N asparagine          1.0          9           1
 P proline            12.2        115           5
 Q glutamine           6.4         60           2
 R arginine            7.9         74           3
 S serine              7.7         72           2
 T threonine           4.8         45           2
 V valine              5.2         49           1
 W tryptophan          0.6          6           1
 Y tyrosine            2.9         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger RNA binding protein 2 isoform 1 
ZFR                   0.399   zinc finger RNA binding protein 
ILF3                  0.166   interleukin enhancer binding factor 3 isoform e [Ho...
ILF3                  0.166   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.166   interleukin enhancer binding factor 3 isoform c [Hom...
ILF3                  0.166   interleukin enhancer binding factor 3 isoform b [Hom...
ILF3                  0.166   interleukin enhancer binding factor 3 isoform a [Hom...
STRBP                 0.158   spermatid perinuclear RNA binding protein 
ILF2                  0.034   interleukin enhancer binding factor 2 
POLR2A                0.028   DNA-directed RNA polymerase II A 
NACA                  0.023   nascent polypeptide-associated complex alpha subuni...
PRB2                  0.022   proline-rich protein BstNI subfamily 2 
BRD4                  0.020   bromodomain-containing protein 4 isoform long 
GLTSCR1               0.019   glioma tumor suppressor candidate region gene 1 [Ho...
RERE                  0.019   atrophin-1 like protein isoform b 
RERE                  0.019   atrophin-1 like protein isoform a 
RERE                  0.019   atrophin-1 like protein isoform a 
PRR12                 0.019   proline rich 12 
FMNL2                 0.019   formin-like 2 
WBP11                 0.018   WW domain binding protein 11 
MBD6                  0.017   methyl-CpG binding domain protein 6 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
PCLO                  0.017   piccolo isoform 2 
PCLO                  0.017   piccolo isoform 1 
WASF3                 0.017   WAS protein family, member 3 
SFPQ                  0.017   splicing factor proline/glutamine rich (polypyrimidin...
FIGNL2                0.017   fidgetin-like 2 
ZMAT4                 0.017   zinc finger, matrin type 4 isoform a 
SS18                  0.017   synovial sarcoma translocation, chromosome 18 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press