Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RPS6KA4 Sequence: fasta or formatted (766aa) NCBI GI: 55743138
Description:

ribosomal protein S6 kinase, 90kDa, polypeptide 4 isoform b

Referenced in:

Ribosomes

Other entries for this name:
alt prot [772aa] ribosomal protein S6 kinase, 90kDa, polypeptide 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         68           2
 C cysteine            1.3         10           1
 D aspartate           4.0         31           3
 E glutamate           7.8         60           2
 F phenylalanine       4.4         34           2
 G glycine             8.5         65           2
 H histidine           2.7         21           2
 I isoleucine          3.3         25           2
 K lysine              4.7         36           2
 L leucine            11.5         88           2
 M methionine          1.7         13           2
 N asparagine          2.2         17           2
 P proline             6.4         49           3
 Q glutamine           4.8         37           2
 R arginine            8.0         61           2
 S serine              6.7         51           2
 T threonine           3.7         28           1
 V valine              6.4         49           2
 W tryptophan          0.8          6           2
 Y tyrosine            2.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is... 
RPS6KA4               0.996   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
RPS6KA5               0.636   ribosomal protein S6 kinase, polypeptide 5 isoform a...
RPS6KA5               0.467   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KA1               0.344   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.342   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA3               0.340   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA2               0.338   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.338   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA6               0.328   ribosomal protein S6 kinase polypeptide 6 
RPS6KB1               0.206   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KB2               0.205   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
AKT3                  0.162   AKT3 kinase isoform 1 
AKT3                  0.162   AKT3 kinase isoform 2 
AKT2                  0.160   AKT2 kinase 
AKT1                  0.157   AKT1 kinase 
AKT1                  0.157   AKT1 kinase 
AKT1                  0.157   AKT1 kinase 
PRKCI                 0.157   protein kinase C, iota 
PRKCH                 0.155   protein kinase C, eta 
SGK3                  0.155   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.155   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PRKCA                 0.154   protein kinase C, alpha 
SGK1                  0.149   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.149   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.149   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.149   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PRKCB                 0.149   protein kinase C, beta isoform 1 
PRKCZ                 0.148   protein kinase C, zeta isoform 2 
PRKCZ                 0.148   protein kinase C, zeta isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press