Guide to the Human Genome
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Name: DNM1 Sequence: fasta or formatted (864aa) NCBI GI: 59853099
Description:

dynamin 1 isoform 1

Referenced in:

Additional Brain Proteins
Additional Membrane Functions
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [851aa] dynamin 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         51           2
 C cysteine            0.8          7           1
 D aspartate           6.0         52           2
 E glutamate           7.6         66           2
 F phenylalanine       3.6         31           2
 G glycine             6.0         52           2
 H histidine           1.5         13           1
 I isoleucine          5.6         48           2
 K lysine              6.2         54           3
 L leucine             8.9         77           2
 M methionine          3.2         28           1
 N asparagine          4.6         40           2
 P proline             7.2         62           3
 Q glutamine           4.9         42           2
 R arginine            7.2         62           2
 S serine              6.2         54           2
 T threonine           5.2         45           3
 V valine              6.5         56           2
 W tryptophan          0.6          5           1
 Y tyrosine            2.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynamin 1 isoform 1 
DNM1                  0.976   dynamin 1 isoform 2 
DNM2                  0.793   dynamin 2 isoform 1 
DNM2                  0.787   dynamin 2 isoform 2 
DNM2                  0.787   dynamin 2 isoform 3 
DNM3                  0.784   dynamin 3 isoform a 
DNM3                  0.782   dynamin 3 isoform b 
DNM2                  0.781   dynamin 2 isoform 4 
DNM1L                 0.255   dynamin 1-like isoform 2 
DNM1L                 0.255   dynamin 1-like isoform 1 
DNM1L                 0.255   dynamin 1-like isoform 3 
MX1                   0.125   myxovirus resistance protein 1 
MX1                   0.125   myxovirus resistance protein 1 
MX2                   0.112   myxovirus resistance protein 2 
LOC730058             0.081   PREDICTED: UPF0621 protein C-like 
LOC730058             0.081   PREDICTED: UPF0621 protein C-like 
LOC730058             0.081   PREDICTED: UPF0621 protein C-like 
LOC727858             0.057   PREDICTED: similar to dynamin 1 
LOC100288331          0.052   PREDICTED: hypothetical protein XP_002343417 
OPA1                  0.048   optic atrophy 1 isoform 8 
OPA1                  0.048   optic atrophy 1 isoform 7 
OPA1                  0.048   optic atrophy 1 isoform 6 
OPA1                  0.048   optic atrophy 1 isoform 5 
OPA1                  0.048   optic atrophy 1 isoform 4 
OPA1                  0.048   optic atrophy 1 isoform 3 
OPA1                  0.048   optic atrophy 1 isoform 2 
OPA1                  0.048   optic atrophy 1 isoform 1 
LOC100288161          0.046   PREDICTED: hypothetical protein XP_002343416 
LOC100288036          0.046   PREDICTED: hypothetical protein XP_002343372 
FMN1                  0.021   formin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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