Guide to the Human Genome
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Name: DNM1 Sequence: fasta or formatted (851aa) NCBI GI: 56549117
Description:

dynamin 1 isoform 2

Referenced in:

Additional Brain Proteins
Additional Membrane Functions
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [864aa] dynamin 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         50           2
 C cysteine            0.8          7           1
 D aspartate           6.1         52           2
 E glutamate           7.6         65           2
 F phenylalanine       3.5         30           2
 G glycine             6.0         51           2
 H histidine           1.5         13           1
 I isoleucine          5.9         50           2
 K lysine              6.3         54           3
 L leucine             8.9         76           2
 M methionine          3.3         28           1
 N asparagine          4.7         40           2
 P proline             6.8         58           3
 Q glutamine           4.8         41           2
 R arginine            7.1         60           2
 S serine              5.9         50           2
 T threonine           5.4         46           3
 V valine              6.6         56           2
 W tryptophan          0.6          5           1
 Y tyrosine            2.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynamin 1 isoform 2 
DNM1                  0.992   dynamin 1 isoform 1 
DNM2                  0.800   dynamin 2 isoform 1 
DNM2                  0.794   dynamin 2 isoform 2 
DNM2                  0.794   dynamin 2 isoform 3 
DNM3                  0.789   dynamin 3 isoform a 
DNM2                  0.788   dynamin 2 isoform 4 
DNM3                  0.787   dynamin 3 isoform b 
DNM1L                 0.259   dynamin 1-like isoform 2 
DNM1L                 0.259   dynamin 1-like isoform 1 
DNM1L                 0.259   dynamin 1-like isoform 3 
MX1                   0.127   myxovirus resistance protein 1 
MX1                   0.127   myxovirus resistance protein 1 
MX2                   0.114   myxovirus resistance protein 2 
LOC730058             0.082   PREDICTED: UPF0621 protein C-like 
LOC730058             0.082   PREDICTED: UPF0621 protein C-like 
LOC730058             0.082   PREDICTED: UPF0621 protein C-like 
LOC727858             0.058   PREDICTED: similar to dynamin 1 
LOC100288331          0.053   PREDICTED: hypothetical protein XP_002343417 
OPA1                  0.049   optic atrophy 1 isoform 8 
OPA1                  0.049   optic atrophy 1 isoform 7 
OPA1                  0.049   optic atrophy 1 isoform 6 
OPA1                  0.049   optic atrophy 1 isoform 5 
OPA1                  0.049   optic atrophy 1 isoform 4 
OPA1                  0.049   optic atrophy 1 isoform 3 
OPA1                  0.049   optic atrophy 1 isoform 2 
OPA1                  0.049   optic atrophy 1 isoform 1 
LOC100288161          0.047   PREDICTED: hypothetical protein XP_002343416 
LOC100288036          0.047   PREDICTED: hypothetical protein XP_002343372 
DIAPH1                0.021   diaphanous 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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