SMARCD2 4485

Name: SMARCD2	Sequence: fasta or formatted (531aa)		NCBI GI: 148536864
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d2 isoform 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [510aa] SWI/SNF-related matrix-associated actin-dependent regulator of ch...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 46 3 C cysteine 0.8 4 1 D aspartate 5.3 28 2 E glutamate 4.9 26 3 F phenylalanine 3.6 19 2 G glycine 8.5 45 3 H histidine 2.1 11 1 I isoleucine 4.9 26 2 K lysine 5.6 30 2 L leucine 9.4 50 3 M methionine 3.6 19 2 N asparagine 2.4 13 1 P proline 10.0 53 4 Q glutamine 7.0 37 2 R arginine 7.7 41 2 S serine 4.5 24 2 T threonine 4.0 21 2 V valine 4.3 23 1 W tryptophan 0.9 5 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent r... SMARCD2 0.947 SWI/SNF-related matrix-associated actin-dependent r... SMARCD3 0.611 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.611 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.608 SWI/SNF related, matrix associated, actin dependent ... SMARCD1 0.592 SWI/SNF-related matrix-associated actin-dependent r... SMARCD1 0.511 SWI/SNF-related matrix-associated actin-dependent r... SAMD1 0.035 sterile alpha motif domain containing 1 WBP11 0.034 WW domain binding protein 11 TAF4 0.027 TBP-associated factor 4 SEC24D 0.027 Sec24-related protein D CPSF6 0.027 cleavage and polyadenylation specific factor 6, 68 ... COL2A1 0.026 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.026 collagen, type II, alpha 1 isoform 2 precursor [Hom... FOXI3 0.026 forkhead box I3 KLF2 0.026 Kruppel-like factor COL5A1 0.026 alpha 1 type V collagen preproprotein VASP 0.025 vasodilator-stimulated phosphoprotein SNRPC 0.025 small nuclear ribonucleoprotein polypeptide C COL27A1 0.024 collagen, type XXVII, alpha 1 COL1A1 0.024 alpha 1 type I collagen preproprotein SF3B4 0.024 splicing factor 3b, subunit 4 COL5A3 0.024 collagen, type V, alpha 3 preproprotein COL3A1 0.024 collagen type III alpha 1 preproprotein COL11A2 0.024 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.024 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.024 collagen, type XI, alpha 2 isoform 1 preproprotein ... EPN1 0.024 epsin 1 isoform c EPN1 0.024 epsin 1 isoform b EPN1 0.024 epsin 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.