Guide to the Human Genome
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Name: RPS6KA4 Sequence: fasta or formatted (772aa) NCBI GI: 4506735
Description:

ribosomal protein S6 kinase, 90kDa, polypeptide 4 isoform a

Referenced in:

Ribosomes

Other entries for this name:
alt prot [766aa] ribosomal protein S6 kinase, 90kDa, polypeptide 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         68           2
 C cysteine            1.3         10           1
 D aspartate           4.1         32           3
 E glutamate           7.8         60           2
 F phenylalanine       4.7         36           2
 G glycine             8.4         65           2
 H histidine           2.7         21           2
 I isoleucine          3.2         25           2
 K lysine              4.7         36           2
 L leucine            11.4         88           2
 M methionine          1.7         13           2
 N asparagine          2.2         17           2
 P proline             6.5         50           3
 Q glutamine           4.9         38           2
 R arginine            7.9         61           2
 S serine              6.7         52           2
 T threonine           3.6         28           1
 V valine              6.3         49           2
 W tryptophan          0.8          6           2
 Y tyrosine            2.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso... 
RPS6KA4               0.988   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
RPS6KA5               0.641   ribosomal protein S6 kinase, polypeptide 5 isoform a...
RPS6KA5               0.474   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KA1               0.341   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.339   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA3               0.339   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA2               0.336   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.336   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA6               0.326   ribosomal protein S6 kinase polypeptide 6 
RPS6KB1               0.205   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KB2               0.203   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
AKT3                  0.161   AKT3 kinase isoform 1 
AKT3                  0.161   AKT3 kinase isoform 2 
AKT2                  0.159   AKT2 kinase 
AKT1                  0.156   AKT1 kinase 
AKT1                  0.156   AKT1 kinase 
AKT1                  0.156   AKT1 kinase 
PRKCI                 0.155   protein kinase C, iota 
PRKCH                 0.153   protein kinase C, eta 
SGK3                  0.153   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.153   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PRKCA                 0.153   protein kinase C, alpha 
SGK1                  0.148   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.148   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.148   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.148   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PRKCB                 0.147   protein kinase C, beta isoform 1 
PRKCZ                 0.147   protein kinase C, zeta isoform 2 
PRKCZ                 0.147   protein kinase C, zeta isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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