TMC8 16265

Name: TMC8	Sequence: fasta or formatted (726aa)		NCBI GI: 23943900
Description: transmembrane channel-like 8		Referenced in: Auditory and Vestibular Functions Skin and Related Tissues
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 48 2 C cysteine 2.5 18 1 D aspartate 1.7 12 1 E glutamate 4.8 35 2 F phenylalanine 5.5 40 3 G glycine 7.0 51 2 H histidine 1.4 10 1 I isoleucine 2.8 20 1 K lysine 2.6 19 2 L leucine 16.5 120 4 M methionine 1.2 9 2 N asparagine 2.8 20 1 P proline 7.3 53 2 Q glutamine 5.0 36 3 R arginine 7.3 53 3 S serine 8.0 58 3 T threonine 4.3 31 1 V valine 7.0 51 2 W tryptophan 2.5 18 1 Y tyrosine 3.3 24 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane channel-like 8 TMC7 0.235 transmembrane channel-like 7 isoform a TMC7 0.233 transmembrane channel-like 7 isoform b TMC4 0.212 transmembrane channel-like 4 isoform 2 TMC4 0.212 transmembrane channel-like 4 isoform 1 TMC5 0.119 transmembrane channel-like 5 isoform a TMC5 0.119 transmembrane channel-like 5 isoform c TMC5 0.112 transmembrane channel-like 5 isoform b TMC6 0.101 transmembrane channel-like 6 TMC6 0.101 transmembrane channel-like 6 TMC2 0.089 transmembrane cochlear-expressed protein 2 TMC1 0.088 transmembrane channel-like 1 TMC3 0.057 transmembrane channel-like 3 COL17A1 0.010 alpha 1 type XVII collagen SAMD1 0.010 sterile alpha motif domain containing 1 C1QL4 0.010 complement component 1, q subcomponent-like 4 NOTCH3 0.009 Notch homolog 3 COL3A1 0.009 collagen type III alpha 1 preproprotein COL7A1 0.008 alpha 1 type VII collagen precursor RAB11FIP3 0.008 rab11-family interacting protein 3 isoform 1 COL4A4 0.008 alpha 4 type IV collagen precursor ZNF385A 0.008 zinc finger protein 385A isoform a ZNF385A 0.008 zinc finger protein 385A isoform c COL8A2 0.008 collagen, type VIII, alpha 2 COL14A1 0.008 collagen, type XIV, alpha 1 TBKBP1 0.008 TBK1 binding protein 1 LDB3 0.007 LIM domain binding 3 isoform 1 COL13A1 0.007 alpha 1 type XIII collagen isoform 20 COL13A1 0.007 alpha 1 type XIII collagen isoform 19 COL13A1 0.007 alpha 1 type XIII collagen isoform 18 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.