TMC4 13147

Name: TMC4	Sequence: fasta or formatted (706aa)		NCBI GI: 21389589
Description: transmembrane channel-like 4 isoform 2		Referenced in: Auditory and Vestibular Functions
Other entries for this name: alt prot [712aa] transmembrane channel-like 4 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 56 2 C cysteine 2.1 15 1 D aspartate 1.7 12 1 E glutamate 5.5 39 5 F phenylalanine 5.2 37 3 G glycine 7.1 50 2 H histidine 0.8 6 1 I isoleucine 3.3 23 2 K lysine 3.0 21 2 L leucine 17.4 123 4 M methionine 1.0 7 1 N asparagine 2.3 16 1 P proline 6.4 45 2 Q glutamine 4.4 31 2 R arginine 6.5 46 2 S serine 7.2 51 2 T threonine 5.7 40 2 V valine 6.9 49 2 W tryptophan 2.4 17 1 Y tyrosine 3.1 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane channel-like 4 isoform 2 TMC4 0.995 transmembrane channel-like 4 isoform 1 TMC7 0.295 transmembrane channel-like 7 isoform a TMC7 0.293 transmembrane channel-like 7 isoform b TMC8 0.221 transmembrane channel-like 8 TMC5 0.113 transmembrane channel-like 5 isoform a TMC5 0.113 transmembrane channel-like 5 isoform c TMC1 0.109 transmembrane channel-like 1 TMC2 0.106 transmembrane cochlear-expressed protein 2 TMC5 0.100 transmembrane channel-like 5 isoform b TMC6 0.089 transmembrane channel-like 6 TMC6 0.089 transmembrane channel-like 6 TMC3 0.070 transmembrane channel-like 3 DUSP27 0.009 dual specificity phosphatase 27 NFKBIL1 0.007 nuclear factor of kappa light polypeptide gene enha... NFKBIL1 0.007 nuclear factor of kappa light polypeptide gene enha... NFKBIL1 0.006 nuclear factor of kappa light polypeptide gene enha... NFKBIL1 0.006 nuclear factor of kappa light polypeptide gene enha... AXIN2 0.005 axin 2 TFR2 0.005 transferrin receptor 2 FAM189A1 0.005 hypothetical protein LOC23359 SLC12A9 0.005 solute carrier family 12 (potassium/chloride transpo... PLP1 0.004 proteolipid protein 1 isoform 1 PLP1 0.004 proteolipid protein 1 isoform 1 LOC100293526 0.004 PREDICTED: hypothetical protein LOC100291411 0.004 PREDICTED: hypothetical protein XP_002348184 LOC100288664 0.004 PREDICTED: hypothetical protein XP_002343845 MINK1 0.004 misshapen/NIK-related kinase isoform 4 MINK1 0.004 misshapen/NIK-related kinase isoform 2 MINK1 0.004 misshapen/NIK-related kinase isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.