TMC6 10047

Name: TMC6	Sequence: fasta or formatted (805aa)		NCBI GI: 187608791
Description: transmembrane channel-like 6		Referenced in: Auditory and Vestibular Functions Skin and Related Tissues
Other entries for this name: alt mRNA [805aa] transmembrane channel-like 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 62 3 C cysteine 3.0 24 2 D aspartate 2.4 19 1 E glutamate 5.6 45 4 F phenylalanine 4.0 32 2 G glycine 7.0 56 2 H histidine 1.9 15 1 I isoleucine 3.7 30 2 K lysine 3.0 24 2 L leucine 15.7 126 6 M methionine 1.9 15 1 N asparagine 1.9 15 1 P proline 5.3 43 2 Q glutamine 5.3 43 2 R arginine 7.1 57 3 S serine 7.0 56 2 T threonine 5.0 40 2 V valine 7.6 61 2 W tryptophan 2.0 16 1 Y tyrosine 3.2 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane channel-like 6 TMC6 1.000 transmembrane channel-like 6 TMC5 0.237 transmembrane channel-like 5 isoform c TMC5 0.237 transmembrane channel-like 5 isoform a TMC5 0.197 transmembrane channel-like 5 isoform b TMC7 0.109 transmembrane channel-like 7 isoform a TMC7 0.106 transmembrane channel-like 7 isoform b TMC8 0.092 transmembrane channel-like 8 TMC4 0.078 transmembrane channel-like 4 isoform 1 TMC4 0.078 transmembrane channel-like 4 isoform 2 TMC1 0.068 transmembrane channel-like 1 TMC2 0.063 transmembrane cochlear-expressed protein 2 TMC3 0.045 transmembrane channel-like 3 SLCO5A1 0.005 solute carrier organic anion transporter family, me... SLCO5A1 0.005 solute carrier organic anion transporter family, me... GPR114 0.004 G protein-coupled receptor 114 ADRA2B 0.004 alpha-2B-adrenergic receptor ERBB2IP 0.004 ERBB2 interacting protein isoform 7 ERBB2IP 0.004 ERBB2 interacting protein isoform 2 UBAP2 0.004 ubiquitin associated protein 2 PRDM9 0.004 PR domain containing 9 CALCOCO1 0.004 coiled-coil transcriptional coactivator isoform 2 [... CALCOCO1 0.004 coiled-coil transcriptional coactivator isoform 1 [H... HOMER3 0.003 Homer, neuronal immediate early gene, 3 isoform 3 [... HOMER3 0.003 Homer, neuronal immediate early gene, 3 isoform 1 [... HOMER3 0.003 Homer, neuronal immediate early gene, 3 isoform 1 [... SLC44A2 0.003 solute carrier family 44, member 2 isoform 1 SLC44A2 0.003 solute carrier family 44, member 2 isoform 2 LACE1 0.003 lactation elevated 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.