Guide to the Human Genome
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Name: ZNF385A Sequence: fasta or formatted (386aa) NCBI GI: 195972903
Description:

zinc finger protein 385A isoform a

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [305aa] zinc finger protein 385A isoform b
alt prot [366aa] zinc finger protein 385A isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         37           4
 C cysteine            1.6          6           1
 D aspartate           1.6          6           1
 E glutamate           5.4         21           4
 F phenylalanine       1.8          7           1
 G glycine            10.4         40           2
 H histidine           3.1         12           1
 I isoleucine          3.9         15           1
 K lysine              6.2         24           2
 L leucine            10.6         41           2
 M methionine          1.3          5           1
 N asparagine          2.8         11           1
 P proline            14.5         56           2
 Q glutamine           3.6         14           1
 R arginine            5.7         22           2
 S serine              7.8         30           2
 T threonine           4.7         18           1
 V valine              4.1         16           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 385A isoform a 
ZNF385A               0.949   zinc finger protein 385A isoform c 
ZNF385A               0.699   zinc finger protein 385A isoform b 
ZNF385D               0.407   zinc finger protein 385D 
ZNF385B               0.398   zinc finger protein 385B isoform 2 
ZNF385B               0.398   zinc finger protein 385B isoform 1 
ZNF385B               0.393   zinc finger protein 385B isoform 3 
ZNF385C               0.318   PREDICTED: zinc finger protein 385C 
ZNF385C               0.318   PREDICTED: zinc finger protein 385C 
ZNF385C               0.318   PREDICTED: zinc finger protein 385C 
ZMAT3                 0.039   p53 target zinc finger protein isoform 1 
ZMAT3                 0.039   p53 target zinc finger protein isoform 2 
ZFPM1                 0.039   zinc finger protein, multitype 1 
ZFHX2                 0.035   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.035   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.035   PREDICTED: zinc finger homeobox 2 
ZFR2                  0.034   zinc finger RNA binding protein 2 isoform 1 
ZNF827                0.027   zinc finger protein 827 
ZNF219                0.027   zinc finger protein 219 
ZNF219                0.027   zinc finger protein 219 
ZNF219                0.027   zinc finger protein 219 
KLF16                 0.026   BTE-binding protein 4 
COL4A5                0.026   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.026   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.026   type IV collagen alpha 5 isoform 3 precursor 
ZFHX4                 0.026   zinc finger homeodomain 4 
COL5A1                0.025   alpha 1 type V collagen preproprotein 
COL11A2               0.025   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.025   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.025   collagen, type XI, alpha 2 isoform 1 preproprotein ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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