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Search of human proteins with 23238200
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23238200 RELT tumor necrosis factor receptor precursor [Homo
sapiens]
(430 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23238200 RELT tumor necrosis factor receptor precursor [Homo ... 913 0.0
gi|21361873 RELT tumor necrosis factor receptor precursor [Homo ... 913 0.0
gi|146094508 receptor expressed in lymphoid tissues like 1 [Homo... 108 7e-24
gi|146094506 receptor expressed in lymphoid tissues like 1 [Homo... 108 7e-24
gi|194097448 RELT-like 2 [Homo sapiens] 84 2e-16
gi|194097446 RELT-like 2 [Homo sapiens] 84 2e-16
gi|14790170 tumor necrosis factor receptor superfamily, member 6... 58 2e-08
gi|4507585 tumor necrosis factor receptor superfamily, member 6b... 58 2e-08
gi|4507579 tumor necrosis factor receptor superfamily, member 4 ... 57 2e-08
gi|11641231 ectodysplasin A receptor precursor [Homo sapiens] 56 6e-08
gi|11140823 X-linked ectodysplasin receptor [Homo sapiens] 56 6e-08
gi|23238204 tumor necrosis factor receptor superfamily, member 1... 52 1e-06
gi|23238202 tumor necrosis factor receptor superfamily, member 1... 52 1e-06
gi|4505039 lymphotoxin beta receptor [Homo sapiens] 49 9e-06
gi|148743793 osteoprotegerin precursor [Homo sapiens] 47 3e-05
gi|21264602 laminin alpha 5 [Homo sapiens] 41 0.002
gi|23200041 tumor necrosis factor receptor superfamily, member 1... 41 0.002
gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens] 40 0.003
gi|12751477 forkhead box L2 [Homo sapiens] 38 0.016
gi|5730095 tumor necrosis factor receptor superfamily, member 9 ... 38 0.016
gi|143770880 laminin, beta 4 [Homo sapiens] 37 0.026
gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... 37 0.026
gi|4507565 tumor necrosis factor receptor superfamily, member 11... 37 0.035
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 37 0.035
gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens] 37 0.035
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 37 0.045
gi|33598931 scavenger receptor class F, member 1 isoform 3 precu... 36 0.059
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 36 0.059
gi|34486092 adenylate cyclase 5 [Homo sapiens] 36 0.077
gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapi... 35 0.13
>gi|23238200 RELT tumor necrosis factor receptor precursor [Homo
sapiens]
Length = 430
Score = 913 bits (2360), Expect = 0.0
Identities = 430/430 (100%), Positives = 430/430 (100%)
Query: 1 MKPSLLCRPLSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAW 60
MKPSLLCRPLSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAW
Sbjct: 1 MKPSLLCRPLSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAW 60
Query: 61 GSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWGVPRVPCQPCSWAPLGTHG 120
GSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWGVPRVPCQPCSWAPLGTHG
Sbjct: 61 GSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWGVPRVPCQPCSWAPLGTHG 120
Query: 121 CDEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGI 180
CDEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGI
Sbjct: 121 CDEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGI 180
Query: 181 LVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANEDTIGVLVRLITEKKENAAA 240
LVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANEDTIGVLVRLITEKKENAAA
Sbjct: 181 LVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANEDTIGVLVRLITEKKENAAA 240
Query: 241 LEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQ 300
LEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQ
Sbjct: 241 LEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQ 300
Query: 301 KKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRT 360
KKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRT
Sbjct: 301 KKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRT 360
Query: 361 SSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGSRTKWLKPPAENKAEENRYV 420
SSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGSRTKWLKPPAENKAEENRYV
Sbjct: 361 SSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGSRTKWLKPPAENKAEENRYV 420
Query: 421 VRLSESNLVI 430
VRLSESNLVI
Sbjct: 421 VRLSESNLVI 430
>gi|21361873 RELT tumor necrosis factor receptor precursor [Homo
sapiens]
Length = 430
Score = 913 bits (2360), Expect = 0.0
Identities = 430/430 (100%), Positives = 430/430 (100%)
Query: 1 MKPSLLCRPLSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAW 60
MKPSLLCRPLSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAW
Sbjct: 1 MKPSLLCRPLSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAW 60
Query: 61 GSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWGVPRVPCQPCSWAPLGTHG 120
GSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWGVPRVPCQPCSWAPLGTHG
Sbjct: 61 GSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWGVPRVPCQPCSWAPLGTHG 120
Query: 121 CDEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGI 180
CDEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGI
Sbjct: 121 CDEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGI 180
Query: 181 LVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANEDTIGVLVRLITEKKENAAA 240
LVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANEDTIGVLVRLITEKKENAAA
Sbjct: 181 LVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANEDTIGVLVRLITEKKENAAA 240
Query: 241 LEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQ 300
LEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQ
Sbjct: 241 LEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQ 300
Query: 301 KKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRT 360
KKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRT
Sbjct: 301 KKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRT 360
Query: 361 SSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGSRTKWLKPPAENKAEENRYV 420
SSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGSRTKWLKPPAENKAEENRYV
Sbjct: 361 SSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGSRTKWLKPPAENKAEENRYV 420
Query: 421 VRLSESNLVI 430
VRLSESNLVI
Sbjct: 421 VRLSESNLVI 430
>gi|146094508 receptor expressed in lymphoid tissues like 1 [Homo
sapiens]
Length = 271
Score = 108 bits (271), Expect = 7e-24
Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 42/251 (16%)
Query: 144 TRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGP 203
T P N T G PE Y A+VPVF +MGL G+L+C+LLK+KGY CT E
Sbjct: 44 TPSPSNDTGNGHPE-----YIAYALVPVFFIMGLFGVLICHLLKKKGYRCTTEAEQDIEE 98
Query: 204 GGGGSGINPAYRTEDANE--DTIGVLVRLITEKKENAAALEELLKE---YHSKQLVQTS- 257
+ + NE DT+G +V I + + NA L+ ++ + Y + V S
Sbjct: 99 ----EKVEKIELNDSVNENSDTVGQIVHYIMKNEANADVLKAMVADNSLYDPESPVTPST 154
Query: 258 --HRPVSKLPPAPPNVP--HICPHRHHLHTVQGLASLSGPCCSRCSQKKWPEVLLSPEAV 313
PVS P +P P H+C HHLHTV G+ + C RC K+W +
Sbjct: 155 PGSPPVSPGPLSPGGTPGKHVC--GHHLHTVGGV--VERDVCHRCRHKRWHFI------- 203
Query: 314 AATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRTSSMVSEVKTITEA 373
PT + ++ RQGE+T+LSVGRFRV ++ + + +++ A
Sbjct: 204 -----------KPTNKSRE-SRPRRQGEVTVLSVGRFRVTKVEHKSNQKERRSLMSVSGA 251
Query: 374 GPSWGDLPDSP 384
G++P +P
Sbjct: 252 ETVNGEVPATP 262
>gi|146094506 receptor expressed in lymphoid tissues like 1 [Homo
sapiens]
Length = 271
Score = 108 bits (271), Expect = 7e-24
Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 42/251 (16%)
Query: 144 TRQPGNGTRAGGPEETAAQYAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGP 203
T P N T G PE Y A+VPVF +MGL G+L+C+LLK+KGY CT E
Sbjct: 44 TPSPSNDTGNGHPE-----YIAYALVPVFFIMGLFGVLICHLLKKKGYRCTTEAEQDIEE 98
Query: 204 GGGGSGINPAYRTEDANE--DTIGVLVRLITEKKENAAALEELLKE---YHSKQLVQTS- 257
+ + NE DT+G +V I + + NA L+ ++ + Y + V S
Sbjct: 99 ----EKVEKIELNDSVNENSDTVGQIVHYIMKNEANADVLKAMVADNSLYDPESPVTPST 154
Query: 258 --HRPVSKLPPAPPNVP--HICPHRHHLHTVQGLASLSGPCCSRCSQKKWPEVLLSPEAV 313
PVS P +P P H+C HHLHTV G+ + C RC K+W +
Sbjct: 155 PGSPPVSPGPLSPGGTPGKHVC--GHHLHTVGGV--VERDVCHRCRHKRWHFI------- 203
Query: 314 AATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQRTSSMVSEVKTITEA 373
PT + ++ RQGE+T+LSVGRFRV ++ + + +++ A
Sbjct: 204 -----------KPTNKSRE-SRPRRQGEVTVLSVGRFRVTKVEHKSNQKERRSLMSVSGA 251
Query: 374 GPSWGDLPDSP 384
G++P +P
Sbjct: 252 ETVNGEVPATP 262
>gi|194097448 RELT-like 2 [Homo sapiens]
Length = 303
Score = 84.0 bits (206), Expect = 2e-16
Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 46/255 (18%)
Query: 163 YAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANED 222
Y + +V VF LMGL+G ++C++LK+KGY C + G + + P +D NED
Sbjct: 16 YMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSR----GSEPDDAQLQPP-EDDDMNED 70
Query: 223 TIGVLVRLITEKKENAAALEELLKEYHSKQLVQ-TSHRPVSKLPPAPPNVPHICPHRHHL 281
T+ +VR I + + NA AL+E+L + + VQ +S S L P+ H H +
Sbjct: 71 TVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPS------HHHTV 124
Query: 282 HTVQGLASLSGPCCSRCSQKKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGE 341
H S C CS+ K P ++ + K G R GE
Sbjct: 125 HLG------SAAPCLHCSRSKRPPLVRQGRS------------------KEGKSRPRTGE 160
Query: 342 ITILSVGRFRVARIPEQRTSSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGS 401
T+ SVGRFRV I E+R + E + + SWG G + GSGG
Sbjct: 161 TTVFSVGRFRVTHI-EKRYG--LHEHRDGSPTDRSWGS-------GGGQDPGGGQGSGGG 210
Query: 402 RTKWLKPPAENKAEE 416
+ K P E E
Sbjct: 211 QPKAGMPAMERLPPE 225
>gi|194097446 RELT-like 2 [Homo sapiens]
Length = 303
Score = 84.0 bits (206), Expect = 2e-16
Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 46/255 (18%)
Query: 163 YAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGINPAYRTEDANED 222
Y + +V VF LMGL+G ++C++LK+KGY C + G + + P +D NED
Sbjct: 16 YMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSR----GSEPDDAQLQPP-EDDDMNED 70
Query: 223 TIGVLVRLITEKKENAAALEELLKEYHSKQLVQ-TSHRPVSKLPPAPPNVPHICPHRHHL 281
T+ +VR I + + NA AL+E+L + + VQ +S S L P+ H H +
Sbjct: 71 TVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPS------HHHTV 124
Query: 282 HTVQGLASLSGPCCSRCSQKKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGE 341
H S C CS+ K P ++ + K G R GE
Sbjct: 125 HLG------SAAPCLHCSRSKRPPLVRQGRS------------------KEGKSRPRTGE 160
Query: 342 ITILSVGRFRVARIPEQRTSSMVSEVKTITEAGPSWGDLPDSPQPGLPPEQQALLGSGGS 401
T+ SVGRFRV I E+R + E + + SWG G + GSGG
Sbjct: 161 TTVFSVGRFRVTHI-EKRYG--LHEHRDGSPTDRSWGS-------GGGQDPGGGQGSGGG 210
Query: 402 RTKWLKPPAENKAEE 416
+ K P E E
Sbjct: 211 QPKAGMPAMERLPPE 225
>gi|14790170 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 57.8 bits (138), Expect = 2e-08
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 32 CPPGEEPDLD--PGQGTLCRPCPPGTFSAAWGSS-PCQPHARCSLWRRLEAQVGMATRDT 88
CPPG P Q T C+PCPPGTFSA+ SS CQPH C+ G ++ DT
Sbjct: 132 CPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTALGLALNVPGSSSHDT 191
Query: 89 LCGDC 93
LC C
Sbjct: 192 LCTSC 196
Score = 35.4 bits (80), Expect = 0.10
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 10 LSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTF-------SAAWGS 62
L C ++ LP L + + P D + G+ +C CPPGTF +
Sbjct: 11 LLCLVLALPALLPVPAVRGVAETPTYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTC 70
Query: 63 SPCQPHARCSLWRRLE 78
PC P W LE
Sbjct: 71 GPCPPRHYTQFWNYLE 86
>gi|4507585 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 57.8 bits (138), Expect = 2e-08
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 32 CPPGEEPDLD--PGQGTLCRPCPPGTFSAAWGSS-PCQPHARCSLWRRLEAQVGMATRDT 88
CPPG P Q T C+PCPPGTFSA+ SS CQPH C+ G ++ DT
Sbjct: 132 CPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTALGLALNVPGSSSHDT 191
Query: 89 LCGDC 93
LC C
Sbjct: 192 LCTSC 196
Score = 35.4 bits (80), Expect = 0.10
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 10 LSCFLMLLPWPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTF-------SAAWGS 62
L C ++ LP L + + P D + G+ +C CPPGTF +
Sbjct: 11 LLCLVLALPALLPVPAVRGVAETPTYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTC 70
Query: 63 SPCQPHARCSLWRRLE 78
PC P W LE
Sbjct: 71 GPCPPRHYTQFWNYLE 86
>gi|4507579 tumor necrosis factor receptor superfamily, member 4
precursor [Homo sapiens]
Length = 277
Score = 57.4 bits (137), Expect = 2e-08
Identities = 67/228 (29%), Positives = 87/228 (38%), Gaps = 56/228 (24%)
Query: 31 QCPPGEE--PDLDPGQGTLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLE-AQVGMATRD 87
+C PG Q T+CRPC PG ++ S PC+P C+L E Q+ AT+D
Sbjct: 45 ECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQD 104
Query: 88 TLCGDCWPGW-----FGPWGVPRVPCQPCSWAPLGTHGCDEWGRRARRGVEVAAGASSGG 142
T+C C G + P GV PC P ++P C W G AS+
Sbjct: 105 TVC-RCRAGTQPLDSYKP-GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSS 162
Query: 143 ----ETRQP-----------------------------GNGTRAGGPEETAAQYAVIAIV 169
E R P G TR P E AV AI+
Sbjct: 163 DAICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTR---PVEVPGGRAVAAIL 219
Query: 170 PVFCLMGLLG----ILVCNLLKR-KGYHCTAHKEVGPGPGGGGSGINP 212
+ ++GLLG +L LL+R + AHK P GGGS P
Sbjct: 220 GLGLVLGLLGPLAILLALYLLRRDQRLPPDAHK-----PPGGGSFRTP 262
>gi|11641231 ectodysplasin A receptor precursor [Homo sapiens]
Length = 448
Score = 56.2 bits (134), Expect = 6e-08
Identities = 55/190 (28%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 32 CPPGEEPDLDPGQGTL-----CRPCPPGTFSAAWGSSPCQPHARC-SLWRRLEAQVGMAT 85
C PGEEP L G GT C PCP FS G C+ H C +R G
Sbjct: 50 CGPGEEPYLSCGYGTKDEDYGCVPCPAEKFSKG-GYQICRRHKDCEGFFRATVLTPGDME 108
Query: 86 RDTLCGDCWPGWF----GPWGVPRVPCQPCSWAPLGTHGCDEWGRRARRGVEVAAGASSG 141
D CG C PG++ P + + C C AP T C GA+SG
Sbjct: 109 NDAECGPCLPGYYMLENRPRNIYGMVCYSCLLAPPNTKEC--------------VGATSG 154
Query: 142 GETRQPG-NGTRAGGPEETA----------AQYAVIAIVPVFCL-MGLLGILVCNLLKRK 189
PG +G+ P + A A +IA+ +F + + ++ I++ +LK K
Sbjct: 155 ASANFPGTSGSSTLSPFQHAHKELSGQGHLATALIIAMSTIFIMAIAIVLIIMFYILKTK 214
Query: 190 GYH---CTAH 196
CT+H
Sbjct: 215 PSAPACCTSH 224
>gi|11140823 X-linked ectodysplasin receptor [Homo sapiens]
Length = 297
Score = 56.2 bits (134), Expect = 6e-08
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 28 TLWQCPPGEEPDLDPGQG----TLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGM 83
T +C PG+E D G G C CPP + ++WG CQ C++ R++
Sbjct: 17 TCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCAVINRVQKVNCT 76
Query: 84 ATRDTLCGDCWPGWFGP---WGVPRVPCQPCS 112
AT + +CGDC P ++ G+ C PC+
Sbjct: 77 ATSNAVCGDCLPRFYRKTRIGGLQDQECIPCT 108
>gi|23238204 tumor necrosis factor receptor superfamily, member 19
isoform 2 precursor [Homo sapiens]
Length = 417
Score = 52.0 bits (123), Expect = 1e-06
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 31 QCPPGEEPDLDPGQG----TLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATR 86
QC PG E + G G C C F WG C+P C++ R + AT
Sbjct: 51 QCGPGMELSKECGFGYGEDAQCVTCRLHRFKEDWGFQKCKPCLDCAVVNRFQKANCSATS 110
Query: 87 DTLCGDCWPGWFGPW---GVPRVPCQPCSWAP 115
D +CGDC PG++ G + C PC P
Sbjct: 111 DAICGDCLPGFYRKTKLVGFQDMECVPCGDPP 142
>gi|23238202 tumor necrosis factor receptor superfamily, member 19
isoform 1 precursor [Homo sapiens]
Length = 423
Score = 52.0 bits (123), Expect = 1e-06
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 31 QCPPGEEPDLDPGQG----TLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATR 86
QC PG E + G G C C F WG C+P C++ R + AT
Sbjct: 51 QCGPGMELSKECGFGYGEDAQCVTCRLHRFKEDWGFQKCKPCLDCAVVNRFQKANCSATS 110
Query: 87 DTLCGDCWPGWFGPW---GVPRVPCQPCSWAP 115
D +CGDC PG++ G + C PC P
Sbjct: 111 DAICGDCLPGFYRKTKLVGFQDMECVPCGDPP 142
>gi|4505039 lymphotoxin beta receptor [Homo sapiens]
Length = 435
Score = 48.9 bits (115), Expect = 9e-06
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 19 WPLATLTSTTLWQCPPGEEPDL--DPGQGTL-CRPCPPGTF-SAAWGSSPCQPHARCSLW 74
W L L CPPG E +L + G+G C PC G F + + S+ CQPH RC
Sbjct: 135 WALECTHCELLSDCPPGTEAELKDEVGKGNNHCVPCKAGHFQNTSSPSARCQPHTRCENQ 194
Query: 75 RRLEAQVGMATRDTLC 90
+EA G A DT C
Sbjct: 195 GLVEAAPGTAQSDTTC 210
Score = 31.6 bits (70), Expect = 1.5
Identities = 36/132 (27%), Positives = 48/132 (36%), Gaps = 27/132 (20%)
Query: 32 CPPGEEPDLDPGQGTLCRPCPPGTFSAAWGS----SPCQPHAR------------CSLWR 75
C E+ +P C CPPGT+ +A S + C A C L R
Sbjct: 43 CRDQEKEYYEPQHRICCSRCPPGTYVSAKCSRIRDTVCATCAENSYNEHWNYLTICQLCR 102
Query: 76 RLEAQVGM-------ATRDTLCGDCWPGWF-GPWGVPRVPCQPCSWAPLGTHG--CDEWG 125
+ +G+ + R T C C PG F W + C+ S P GT DE G
Sbjct: 103 PCDPVMGLEEIAPCTSKRKTQC-RCQPGMFCAAWALECTHCELLSDCPPGTEAELKDEVG 161
Query: 126 RRARRGVEVAAG 137
+ V AG
Sbjct: 162 KGNNHCVPCKAG 173
>gi|148743793 osteoprotegerin precursor [Homo sapiens]
Length = 401
Score = 47.4 bits (111), Expect = 3e-05
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 32 CPPG--EEPDLDPGQGTLCRPCPPGTFSAAWGS-SPCQPHARCSLWRRLEAQVGMATRDT 88
CPPG P + T+C+ CP G FS S +PC+ H CS++ L Q G AT D
Sbjct: 124 CPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDN 183
Query: 89 LC 90
+C
Sbjct: 184 IC 185
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 41.2 bits (95), Expect = 0.002
Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 16/91 (17%)
Query: 44 QGTLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVG-----MATRDTLCGDCWPGWF 98
QGT C C PG + G PCQ + R + G + C C PG+F
Sbjct: 522 QGTHCELCAPGFYGP--GCQPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYF 579
Query: 99 GPWGVPRVP-CQPCSWAPLGT--HGCDEWGR 126
P CQ C +P GT GCDE GR
Sbjct: 580 ------HFPLCQLCGCSPAGTLPEGCDEAGR 604
Score = 34.7 bits (78), Expect = 0.17
Identities = 42/139 (30%), Positives = 47/139 (33%), Gaps = 29/139 (20%)
Query: 45 GTLCRPCPPGTFS--AAWGSSPCQPHARCS-------LWRRLEAQVGMA------TRDTL 89
G C C PG F GSS CQP CS L+ + G T
Sbjct: 1945 GASCERCAPGFFGNPLVLGSS-CQP-CDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPR 2002
Query: 90 CGDCWPGWFGPWGVPRVPCQPCSWAPLGTHGCDE-----------WGRRARRGVEVAAGA 138
C C PG++G +P C C P GT CD GRR R E G
Sbjct: 2003 CEICAPGFYGNALLPG-NCTRCDCTPCGTEACDPHSGHCLCKAGVTGRRCDRCQEGHFGF 2061
Query: 139 SSGGETRQPGNGTRAGGPE 157
G R G A G E
Sbjct: 2062 DGCGGCRPCACGPAAEGSE 2080
Score = 31.2 bits (69), Expect = 1.9
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 48 CRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWGVPRVP 107
CRPC G AA GS C P + + T C +C PG+ WG+P
Sbjct: 2067 CRPCACGP--AAEGSE-CHPQSG-------QCHCRPGTMGPQCRECAPGY---WGLPEQG 2113
Query: 108 CQPC 111
C+ C
Sbjct: 2114 CRRC 2117
>gi|23200041 tumor necrosis factor receptor superfamily, member 14
precursor [Homo sapiens]
Length = 283
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 53/134 (39%)
Query: 31 QCPPGEEPDLDPGQ--GTLCRPCPPGTF-------------------------------- 56
+C PG G+ GT+C PCPPGT+
Sbjct: 56 KCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTE 115
Query: 57 SAAWGSSP--------------CQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWG 102
+A G SP C+ +A S +R++ + G ++DTLC +C PG F P G
Sbjct: 116 NAVCGCSPGHFCIVQDGDHCAACRAYATSSPGQRVQ-KGGTESQDTLCQNCPPGTFSPNG 174
Query: 103 VPRVPCQ---PCSW 113
CQ CSW
Sbjct: 175 TLE-ECQHQTKCSW 187
Score = 39.3 bits (90), Expect = 0.007
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 44 QGTLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWF 98
Q TLC+ CPPGTFS CQ +CS W +A G ++ W WF
Sbjct: 158 QDTLCQNCPPGTFSPNGTLEECQHQTKCS-WLVTKAGAGTSSSH------WVWWF 205
>gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens]
Length = 998
Score = 40.4 bits (93), Expect = 0.003
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 32 CPPGEEPDLDPGQGTLCRPCPPGTFSAAWGSSPCQP 67
C G EP Q CRPCPPG++ A G PC P
Sbjct: 271 CATGHEPAAKESQ---CRPCPPGSYKAKQGEGPCLP 303
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 38.1 bits (87), Expect = 0.016
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 265 PPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQKKWPEVLLSPEAVAATTPVPSLLP 324
PP PP+ PH PH HHLH A+ P P LSP + A P P
Sbjct: 284 PPPPPH-PHPHPHAHHLHA----AAAPPPAPPHHGAAAPPPGQLSPASPATAAPP---AP 335
Query: 325 NPTRVPKAGAKAGRQGEITIL 345
PT P RQ E+ ++
Sbjct: 336 APTSAPGLQFACARQPELAMM 356
>gi|5730095 tumor necrosis factor receptor superfamily, member 9
precursor [Homo sapiens]
Length = 255
Score = 38.1 bits (87), Expect = 0.016
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 32 CPPGEEPDLDPGQGTLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATRDTLCG 91
CP G D + Q +C PCPP +FS+A G C +C R + +T + C
Sbjct: 31 CPAGTFCDNNRNQ--ICSPCPPNSFSSAGGQRTCDICRQCKGVFRTRKECS-STSNAEC- 86
Query: 92 DCWPGW 97
DC PG+
Sbjct: 87 DCTPGF 92
>gi|143770880 laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 37.4 bits (85), Expect = 0.026
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 41 DPGQGTLCRPC--PPGTFSAAWGSSPCQPHARCS--LWRRLEAQVGMATRDTLCGDCWPG 96
+P G CRPC P S + + C + S + L+ G T CG+C G
Sbjct: 901 NPSSGQPCRPCLCPDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTG-----TQCGECSTG 955
Query: 97 WFGPWGVPRVPCQPCS 112
++G + PCQPC+
Sbjct: 956 FYGNPRISGAPCQPCA 971
>gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Homo sapiens]
Length = 616
Score = 37.4 bits (85), Expect = 0.026
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 14/158 (8%)
Query: 240 ALEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCS 299
AL+ L ++ H L+ + VS P P P +CP + L Q + +R
Sbjct: 187 ALKILHRKIHVTPLIPGKSQSVSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQHLARRP 246
Query: 300 QKKWPEVLLSPEAVAATTPVPSLLPNPTRVPKAGAKAGRQGEITILSVGRFRVARIPEQR 359
K P ++ +P + P P P P VP AG + G +G V +P +R
Sbjct: 247 VKDIPPLMQTP--IQGGIPAPG--PIPAAVPGAGPGSLTPGGAMQPQLGMPGVGPVPLER 302
Query: 360 TSSMVSEVKTITEAGP----------SWGDLPDSPQPG 387
+S+ + GP GD P+ P+ G
Sbjct: 303 GQVQMSDPRAPIPRGPVTPGGLPPRGLLGDAPNDPRGG 340
>gi|4507565 tumor necrosis factor receptor superfamily, member 11a
precursor [Homo sapiens]
Length = 616
Score = 37.0 bits (84), Expect = 0.035
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 31 QCPPG--EEPDLDPGQGTLCRPCPPGTFSAAWGSS-PCQPHARCSLWRRLEAQVGMATRD 87
+C PG + L + T+C+PC G FS A+ S+ C+P C+ + G D
Sbjct: 132 ECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFLGKRVEHHGTEKSD 191
Query: 88 TLCGDCWP 95
+C P
Sbjct: 192 AVCSSSLP 199
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 37.0 bits (84), Expect = 0.035
Identities = 47/196 (23%), Positives = 68/196 (34%), Gaps = 36/196 (18%)
Query: 258 HRPVSKLPPAPPNVPHICPHRHHLHTVQGLASLSGPCCSRCSQKKWPEVLLSPEA----V 313
H P PP PP P + H HH +GL S G CS S+ + E V
Sbjct: 691 HHPAPPPPPPPPPPPPLAQHPHH----RGLLSPGGTSCSYPSEDSSEDEDDEEEEQEVDV 746
Query: 314 AATTPVPSLLPNPTRVPKAGAKAGRQGEI----TILSVGRFRVARIPEQRTSSM------ 363
P R P + + E+ ++ GRF R P ++ SS
Sbjct: 747 EGHKPPEGEEEEEGRDPDDDEEEDEETEVLLGDPLVGGGRFLQGRGPSEKGSSRDRAPAV 806
Query: 364 -------VSEVKTITE---AGPSWGDLPDSPQPGLPPEQQALLGSGGSRTKWLKPPAE-- 411
++ + + E G DLP P P L P++ + GS + P E
Sbjct: 807 AGAFPLGLNSSRLLQEDGKLGDPGSDLPPPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQ 866
Query: 412 ------NKAEENRYVV 421
K +EN V+
Sbjct: 867 PSYKDSQKTKENNQVI 882
>gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]
Length = 993
Score = 37.0 bits (84), Expect = 0.035
Identities = 26/77 (33%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 43 GQGTLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATRDTLCGDCWPGWFGPWG 102
GQ C PCP GTF G C +G T G C PG G
Sbjct: 647 GQTEQCVPCPAGTFQEREGQLSCD----LCPGSDAHGPLGATNVTTCAGQCPPGQHSVDG 702
Query: 103 VPRVPCQPCSWAPLGTH 119
PCQPC P GT+
Sbjct: 703 FK--PCQPC---PRGTY 714
Score = 35.4 bits (80), Expect = 0.10
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 22 ATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQV 81
AT +T QCPPG+ +D + C+PCP GT+ G + C P L + E +
Sbjct: 683 ATNVTTCAGQCPPGQH-SVDGFKP--CQPCPRGTYQPEAGRTLCFP-CGGGLTTKHEGAI 738
Query: 82 GMATRDTLCGDCWPGWFGPWGVPR-VPCQPCSWAP 115
DT C PG + + R + C S+ P
Sbjct: 739 SFQDCDTKV-QCSPGHYYNTSIHRCIRCAMGSYQP 772
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 36.6 bits (83), Expect = 0.045
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 42 PGQGT---LCRPCPPGTFSAAWGSSP-CQPHARCSLWRRLEAQVGMATRDTLCGDCWP 95
PG T +C+PC PGTFS S+ C+PH C+ + A G A+ D +C P
Sbjct: 152 PGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICN----VVAIPGNASMDAVCTSTSP 205
>gi|33598931 scavenger receptor class F, member 1 isoform 3
precursor [Homo sapiens]
Length = 569
Score = 36.2 bits (82), Expect = 0.059
Identities = 35/96 (36%), Positives = 38/96 (39%), Gaps = 24/96 (25%)
Query: 32 CPP--GEEPDLDPG-QGTLCR-PCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATRD 87
C P G +PG GT C+ PC PGTF G S Q C E G
Sbjct: 274 CSPDTGSCESCEPGWNGTQCQQPCLPGTF----GESCEQQCPHCRHGEACEPDTGH---- 325
Query: 88 TLCGDCWPGWFGPWGVPRVPCQ-PCSWAPLGTHGCD 122
C C PGW GP C+ PC P GT G D
Sbjct: 326 --CQRCDPGWLGP------RCEDPC---PTGTFGED 350
Score = 29.3 bits (64), Expect = 7.2
Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 41 DPG--QGTLCRPCPPGTFSA----AWGSSPCQPH---ARCSLWRRLEAQVGMATRDTLCG 91
+PG T RPC T +A A G+ C+P RCS R +D+
Sbjct: 151 EPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSF--RCNCHGSPCEQDSGRC 208
Query: 92 DCWPGWFGPWGVPRVPC--QPCSWAPLGTHGCDEWGRRARRGVEVAAGA 138
C PGW+GP + C CS A G C R AR + AG+
Sbjct: 209 ACRPGWWGPECQQQCECVRGRCS-AASGECTCPPGFRGARCELPCPAGS 256
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 36.2 bits (82), Expect = 0.059
Identities = 35/96 (36%), Positives = 38/96 (39%), Gaps = 24/96 (25%)
Query: 32 CPP--GEEPDLDPG-QGTLCR-PCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGMATRD 87
C P G +PG GT C+ PC PGTF G S Q C E G
Sbjct: 274 CSPDTGSCESCEPGWNGTQCQQPCLPGTF----GESCEQQCPHCRHGEACEPDTGH---- 325
Query: 88 TLCGDCWPGWFGPWGVPRVPCQ-PCSWAPLGTHGCD 122
C C PGW GP C+ PC P GT G D
Sbjct: 326 --CQRCDPGWLGP------RCEDPC---PTGTFGED 350
Score = 29.3 bits (64), Expect = 7.2
Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 41 DPG--QGTLCRPCPPGTFSA----AWGSSPCQPH---ARCSLWRRLEAQVGMATRDTLCG 91
+PG T RPC T +A A G+ C+P RCS R +D+
Sbjct: 151 EPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSF--RCNCHGSPCEQDSGRC 208
Query: 92 DCWPGWFGPWGVPRVPC--QPCSWAPLGTHGCDEWGRRARRGVEVAAGA 138
C PGW+GP + C CS A G C R AR + AG+
Sbjct: 209 ACRPGWWGPECQQQCECVRGRCS-AASGECTCPPGFRGARCELPCPAGS 256
>gi|34486092 adenylate cyclase 5 [Homo sapiens]
Length = 1261
Score = 35.8 bits (81), Expect = 0.077
Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 112 SWAPLGTHGCDEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPV 171
+W G C RR RRG A+SGG TR P G GG AA + P
Sbjct: 102 AWQERGGDDCGRGSRRQRRG------AASGGSTRAPPAG-GGGGSAAAAASAGGTEVRPR 154
Query: 172 FCLMGLLGILVCNLLKRKGYHCTAHK------EVGPGPGGGGSGINPAYRTEDANEDTIG 225
+G L +R+G A + E G G G GGS + ++G
Sbjct: 155 SVEVG--------LEERRGKGRAADELEAGAVEGGEGSGDGGSSADSGSGAGPGAVLSLG 206
Query: 226 ----VLVRLITEKKENAAALEELLKEY 248
L+++ KK + LE L + Y
Sbjct: 207 ACCLALLQIFRSKKFPSDKLERLYQRY 233
>gi|4507575 tumor necrosis factor receptor 1 precursor [Homo
sapiens]
Length = 455
Score = 35.0 bits (79), Expect = 0.13
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 42 PGQGTLCRPCPPGTFSAAWGSSPCQPHAR----CSLWRRLEAQVGMAT----RDTLCGDC 93
PGQ T CR C G+F+A+ + H R CS R+ QV +++ RDT+CG
Sbjct: 75 PGQDTDCRECESGSFTAS------ENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCR 128
Query: 94 WPGWFGPWGVPRVPCQPCSWAPLGT 118
+ W C CS GT
Sbjct: 129 KNQYRHYWSENLFQCFNCSLCLNGT 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,137,624
Number of Sequences: 37866
Number of extensions: 1248930
Number of successful extensions: 6456
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 6163
Number of HSP's gapped (non-prelim): 408
length of query: 430
length of database: 18,247,518
effective HSP length: 105
effective length of query: 325
effective length of database: 14,271,588
effective search space: 4638266100
effective search space used: 4638266100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.