Guide to the Human Genome
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Name: RELL1 Sequence: fasta or formatted (271aa) NCBI GI: 146094508
Description:

receptor expressed in lymphoid tissues like 1

Referenced in:

TNF and Related Signals

Other entries for this name:
alt mRNA [271aa] receptor expressed in lymphoid tissues like 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         17           3
 C cysteine            1.8          5           1
 D aspartate           3.3          9           1
 E glutamate           7.7         21           3
 F phenylalanine       2.2          6           2
 G glycine             8.5         23           2
 H histidine           4.4         12           2
 I isoleucine          3.0          8           1
 K lysine              5.5         15           3
 L leucine             5.9         16           2
 M methionine          1.8          5           1
 N asparagine          4.4         12           1
 P proline             8.1         22           2
 Q glutamine           1.5          4           1
 R arginine            6.6         18           2
 S serine              8.9         24           2
 T threonine           6.6         18           2
 V valine             11.1         30           2
 W tryptophan          0.4          1           1
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   receptor expressed in lymphoid tissues like 1 [Homo... 
RELL1                 1.000   receptor expressed in lymphoid tissues like 1 [Homo...
RELT                  0.157   RELT tumor necrosis factor receptor precursor 
RELT                  0.157   RELT tumor necrosis factor receptor precursor 
RELL2                 0.153   RELT-like 2 
RELL2                 0.153   RELT-like 2 
SSPO                  0.017   SCO-spondin 
FAM110B               0.015   hypothetical protein LOC90362 
CUX2                  0.015   cut-like 2 
MLL4                  0.015   myeloid/lymphoid or mixed-lineage leukemia 4 
SCARA3                0.015   scavenger receptor class A, member 3 isoform 1 [Homo...
INHBB                 0.013   inhibin beta B subunit preproprotein 
LMTK3                 0.013   lemur tyrosine kinase 3 
TAOK2                 0.013   TAO kinase 2 isoform 1 
TAOK2                 0.013   TAO kinase 2 isoform 2 
ATN1                  0.013   atrophin-1 
ATN1                  0.013   atrophin-1 
TNRC18                0.013   trinucleotide repeat containing 18 
EMID2                 0.013   EMI domain containing 2 
CNGB1                 0.013   cyclic nucleotide gated channel beta 1 isoform a [H...
WNK4                  0.013   WNK lysine deficient protein kinase 4 
COL7A1                0.013   alpha 1 type VII collagen precursor 
FUBP1                 0.013   far upstream element-binding protein 
DIAPH2                0.013   diaphanous 2 isoform 12C 
DIAPH2                0.013   diaphanous 2 isoform 156 
RGAG1                 0.013   retrotransposon gag domain containing 1 
CAMTA2                0.013   calmodulin binding transcription activator 2 
COL25A1               0.011   collagen, type XXV, alpha 1 isoform 1 
COL25A1               0.011   collagen, type XXV, alpha 1 isoform 2 
SHANK1                0.011   SH3 and multiple ankyrin repeat domains 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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