Guide to the Human Genome
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Name: RELL2 Sequence: fasta or formatted (303aa) NCBI GI: 194097446
Description:

RELT-like 2

Referenced in:

TNF and Related Signals

Other entries for this name:
alt mRNA [303aa] RELT-like 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         17           2
 C cysteine            1.7          5           1
 D aspartate           5.3         16           3
 E glutamate           6.6         20           1
 F phenylalanine       2.0          6           2
 G glycine            12.5         38           3
 H histidine           3.6         11           3
 I isoleucine          1.7          5           2
 K lysine              3.3         10           3
 L leucine             8.6         26           2
 M methionine          3.0          9           1
 N asparagine          2.0          6           1
 P proline            10.2         31           2
 Q glutamine           5.9         18           1
 R arginine            7.6         23           1
 S serine              9.2         28           2
 T threonine           4.6         14           2
 V valine              5.3         16           1
 W tryptophan          0.3          1           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RELT-like 2 
RELL2                 1.000   RELT-like 2 
RELL1                 0.135   receptor expressed in lymphoid tissues like 1 [Homo...
RELL1                 0.135   receptor expressed in lymphoid tissues like 1 [Homo...
RELT                  0.098   RELT tumor necrosis factor receptor precursor 
RELT                  0.098   RELT tumor necrosis factor receptor precursor 
IRS4                  0.032   insulin receptor substrate 4 
IER5L                 0.030   immediate early response 5-like 
KIAA1688              0.027   KIAA1688 protein 
LOC100290946          0.025   PREDICTED: hypothetical protein XP_002347121 
LOC100288840          0.025   PREDICTED: hypothetical protein XP_002344246 
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 
CSTF2T                0.025   cleavage stimulation factor, 3' pre-RNA, subunit 2, ...
KNDC1                 0.025   kinase non-catalytic C-lobe domain (KIND) containin...
PAWR                  0.023   PRKC, apoptosis, WT1, regulator 
SHANK1                0.023   SH3 and multiple ankyrin repeat domains 1 
SF3B4                 0.022   splicing factor 3b, subunit 4 
ADAMTS19              0.022   ADAM metallopeptidase with thrombospondin type 1 mo...
ARID1A                0.022   AT rich interactive domain 1A isoform a 
GDF7                  0.022   growth differentiation factor 7 preproprotein 
COL1A2                0.020   alpha 2 type I collagen 
TRIO                  0.020   triple functional domain (PTPRF interacting) 
LOC389333             0.020   hypothetical protein LOC389333 
MEFV                  0.020   Mediterranean fever protein 
COL3A1                0.020   collagen type III alpha 1 preproprotein 
LOC100289949          0.020   PREDICTED: hypothetical protein XP_002346877 
C10orf71              0.020   hypothetical protein LOC118461 isoform 1 
SPEG                  0.020   SPEG complex locus 
SMARCC2               0.020   SWI/SNF-related matrix-associated actin-dependent re...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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