Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CTSE Sequence: fasta or formatted (363aa) NCBI GI: 23110952
Description:

cathepsin E isoform b preproprotein

Referenced in:

Aspartic Proteases
Stomach, Small Intestine, and Colon

Other entries for this name:
alt prot [396aa] cathepsin E isoform a preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         16           2
 C cysteine            2.2          8           1
 D aspartate           4.1         15           1
 E glutamate           4.1         15           1
 F phenylalanine       4.7         17           1
 G glycine             8.3         30           2
 H histidine           1.7          6           1
 I isoleucine          3.6         13           2
 K lysine              2.8         10           3
 L leucine            10.2         37           6
 M methionine          3.3         12           2
 N asparagine          2.5          9           1
 P proline             7.4         27           2
 Q glutamine           6.1         22           2
 R arginine            2.2          8           2
 S serine             14.0         51           2
 T threonine           6.6         24           1
 V valine              6.3         23           2
 W tryptophan          2.8         10           1
 Y tyrosine            2.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cathepsin E isoform b preproprotein 
CTSE                  0.701   cathepsin E isoform a preproprotein 
PGA3                  0.336   pepsinogen 3, group I 
PGA5                  0.336   pepsinogen 5, group I 
PGA4                  0.335   pepsinogen 4, group I 
PGC                   0.308   progastricsin (pepsinogen C) 
CTSD                  0.263   cathepsin D preproprotein 
NAPSA                 0.256   napsin A preproprotein 
REN                   0.209   renin preproprotein 
BACE1                 0.089   beta-site APP-cleaving enzyme 1 isoform A preproprote...
BACE2                 0.075   beta-site APP-cleaving enzyme 2 isoform A preproprot...
BACE2                 0.075   beta-site APP-cleaving enzyme 2 isoform B preproprot...
BACE2                 0.075   beta-site APP-cleaving enzyme 2 isoform C preproprot...
BACE1                 0.073   beta-site APP-cleaving enzyme 1 isoform B preproprot...
BACE1                 0.047   beta-site APP-cleaving enzyme 1 isoform C preproprot...
BACE1                 0.037   beta-site APP-cleaving enzyme 1 isoform D preproprot...
ZNF236                0.011   zinc finger protein 236 
SMPD4                 0.007   sphingomyelin phosphodiesterase 4 isoform 2 
SMPD4                 0.007   sphingomyelin phosphodiesterase 4 isoform 1 
FAT1                  0.007   FAT tumor suppressor 1 precursor 
CCDC93                0.007   coiled-coil domain containing 93 
TEAD3                 0.007   TEA domain family member 3 
KAT2B                 0.006   K(lysine) acetyltransferase 2B 
LOC643827             0.006   PREDICTED: similar to cell recognition molecule CAS...
BRWD1                 0.006   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.006   bromodomain and WD repeat domain containing 1 isofor...
EYA1                  0.006   eyes absent 1 isoform c 
MAP1A                 0.006   microtubule-associated protein 1A 
C16orf71              0.006   hypothetical protein LOC146562 
CARD14                0.004   caspase recruitment domain protein 14 isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press