BACE1 12611

Name: BACE1	Sequence: fasta or formatted (476aa)		NCBI GI: 21040366
Description: beta-site APP-cleaving enzyme 1 isoform B preproprotein		Referenced in: Aspartic Proteases Additional Brain Proteins
Other entries for this name: alt prot [457aa] beta-site APP-cleaving enzyme 1 isoform C preproprotein alt prot [432aa] beta-site APP-cleaving enzyme 1 isoform D preproprotein alt prot [501aa] beta-site APP-cleaving enzyme 1 isoform A preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 34 2 C cysteine 2.3 11 1 D aspartate 5.0 24 2 E glutamate 5.7 27 2 F phenylalanine 4.0 19 2 G glycine 9.0 43 2 H histidine 1.9 9 1 I isoleucine 5.9 28 2 K lysine 3.2 15 2 L leucine 9.5 45 3 M methionine 2.9 14 1 N asparagine 2.9 14 1 P proline 5.3 25 2 Q glutamine 4.2 20 2 R arginine 5.5 26 2 S serine 6.3 30 2 T threonine 5.7 27 2 V valine 7.4 35 2 W tryptophan 2.1 10 1 Y tyrosine 4.2 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta-site APP-cleaving enzyme 1 isoform B preproprot... BACE1 0.985 beta-site APP-cleaving enzyme 1 isoform A preproprote... BACE1 0.892 beta-site APP-cleaving enzyme 1 isoform C preproprot... BACE1 0.887 beta-site APP-cleaving enzyme 1 isoform D preproprot... BACE2 0.399 beta-site APP-cleaving enzyme 2 isoform A preproprot... BACE2 0.316 beta-site APP-cleaving enzyme 2 isoform B preproprot... BACE2 0.295 beta-site APP-cleaving enzyme 2 isoform C preproprot... CTSE 0.072 cathepsin E isoform a preproprotein PGC 0.068 progastricsin (pepsinogen C) PGA4 0.067 pepsinogen 4, group I PGA3 0.067 pepsinogen 3, group I PGA5 0.067 pepsinogen 5, group I CTSD 0.065 cathepsin D preproprotein CTSE 0.056 cathepsin E isoform b preproprotein REN 0.051 renin preproprotein NAPSA 0.038 napsin A preproprotein ZNF385A 0.012 zinc finger protein 385A isoform b NSL1 0.008 NSL1, MIND kinetochore complex component isoform 2 ... NSL1 0.008 NSL1, MIND kinetochore complex component isoform 1 ... RPRD2 0.006 Regulation of nuclear pre-mRNA domain containing 2 ... HS3ST3A1 0.006 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3... ZNF385A 0.005 zinc finger protein 385A isoform a ZNF385A 0.005 zinc finger protein 385A isoform c C2orf3 0.005 hypothetical protein LOC6936 KCNJ15 0.005 potassium inwardly-rectifying channel J15 KCNJ15 0.005 potassium inwardly-rectifying channel J15 KCNJ15 0.005 potassium inwardly-rectifying channel J15 FAM134B 0.005 hypothetical protein LOC54463 isoform 1 ASB15 0.004 ankyrin repeat and SOCS box-containing 15 FLJ23834 0.004 hypothetical protein LOC222256 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.