LOC643827 17748

Name: LOC643827	Sequence: fasta or formatted (944aa)		NCBI GI: 239743797
Description: PREDICTED: similar to cell recognition molecule CASPR3		Referenced in: Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 74 3 C cysteine 4.2 40 2 D aspartate 4.3 41 1 E glutamate 5.7 54 2 F phenylalanine 4.0 38 3 G glycine 9.5 90 2 H histidine 2.2 21 2 I isoleucine 3.3 31 1 K lysine 2.8 26 2 L leucine 9.2 87 3 M methionine 1.3 12 1 N asparagine 3.1 29 2 P proline 6.7 63 3 Q glutamine 3.9 37 2 R arginine 7.3 69 2 S serine 8.6 81 3 T threonine 5.9 56 2 V valine 6.2 59 2 W tryptophan 1.5 14 2 Y tyrosine 2.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cell recognition molecule CAS... LOC389722 0.610 PREDICTED: hypothetical protein LOC389722 isoform 1... CNTNAP3 0.607 cell recognition molecule CASPR3 LOC389722 0.374 PREDICTED: hypothetical protein LOC389722 isoform 2... CNTNAP4 0.371 cell recognition protein CASPR4 isoform 2 CNTNAP4 0.371 cell recognition protein CASPR4 isoform 1 CNTNAP5 0.271 contactin associated protein-like 5 CNTNAP2 0.246 cell recognition molecule Caspr2 precursor CNTNAP1 0.165 contactin associated protein 1 precursor FLJ37512 0.137 PREDICTED: novel protein similar to contactin assoc... LOC389722 0.128 PREDICTED: similar to cell recognition molecule CAS... LOC100294401 0.063 PREDICTED: similar to cell recognition molecule Cas... NRXN1 0.046 neurexin 1 isoform alpha1 precursor NRXN1 0.046 neurexin 1 isoform alpha2 precursor NRXN2 0.045 neurexin 2 isoform alpha-2 precursor NRXN2 0.045 neurexin 2 isoform alpha-1 precursor NRXN3 0.044 neurexin 3 isoform 1 precursor EGFLAM 0.025 EGF-like, fibronectin type III and laminin G domains... EGFLAM 0.025 EGF-like, fibronectin type III and laminin G domains... EGFLAM 0.025 EGF-like, fibronectin type III and laminin G domains... EYS 0.025 eyes shut homolog isoform 1 AGRN 0.023 agrin FAT1 0.022 FAT tumor suppressor 1 precursor HSPG2 0.017 heparan sulfate proteoglycan 2 SLIT3 0.016 slit homolog 3 LAMA2 0.015 laminin alpha 2 subunit isoform b precursor LAMA2 0.015 laminin alpha 2 subunit isoform a precursor CELSR3 0.015 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... EGFLAM 0.015 EGF-like, fibronectin type III and laminin G domains... SLIT1 0.014 slit homolog 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.