PGC 29130

Name: PGC	Sequence: fasta or formatted (388aa)		NCBI GI: 4505757
Description: progastricsin (pepsinogen C)		Referenced in: Aspartic Proteases Stomach, Small Intestine, and Colon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 23 2 C cysteine 1.8 7 1 D aspartate 3.1 12 1 E glutamate 5.2 20 2 F phenylalanine 5.4 21 2 G glycine 9.8 38 2 H histidine 0.5 2 1 I isoleucine 3.9 15 2 K lysine 2.3 9 2 L leucine 9.5 37 2 M methionine 2.3 9 1 N asparagine 4.4 17 2 P proline 4.9 19 2 Q glutamine 7.0 27 2 R arginine 1.5 6 1 S serine 10.1 39 2 T threonine 6.7 26 2 V valine 8.0 31 3 W tryptophan 1.8 7 1 Y tyrosine 5.9 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 progastricsin (pepsinogen C) PGA4 0.475 pepsinogen 4, group I PGA3 0.475 pepsinogen 3, group I PGA5 0.471 pepsinogen 5, group I CTSE 0.428 cathepsin E isoform a preproprotein CTSD 0.345 cathepsin D preproprotein NAPSA 0.294 napsin A preproprotein CTSE 0.291 cathepsin E isoform b preproprotein REN 0.273 renin preproprotein BACE2 0.128 beta-site APP-cleaving enzyme 2 isoform C preproprot... BACE2 0.123 beta-site APP-cleaving enzyme 2 isoform A preproprot... BACE2 0.123 beta-site APP-cleaving enzyme 2 isoform B preproprot... BACE1 0.085 beta-site APP-cleaving enzyme 1 isoform B preproprot... BACE1 0.085 beta-site APP-cleaving enzyme 1 isoform A preproprote... LOC649034 0.078 PREDICTED: similar to pepsinogen 3, group I BACE1 0.064 beta-site APP-cleaving enzyme 1 isoform C preproprot... BACE1 0.056 beta-site APP-cleaving enzyme 1 isoform D preproprot... EYA4 0.016 eyes absent 4 isoform d EYA4 0.016 eyes absent 4 isoform b EYA4 0.016 eyes absent 4 isoform a LRP2 0.005 low density lipoprotein-related protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.